RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 CDKAL1Q5VV42 579 aa24.27■■□□□ 1.48
LIMS2-201ENST00000324938 KLHL10Q6JEL2 608 aa24.27■■□□□ 1.48
LIMS2-201ENST00000324938 APTXQ7Z2E3 356 aaKnown RBP24.27■■□□□ 1.48
LIMS2-201ENST00000324938 MTRQ99707 1265 aa24.27■■□□□ 1.48
LIMS2-201ENST00000324938 ZMYND12Q9H0C1 365 aa24.27■■□□□ 1.48
LIMS2-201ENST00000324938 QTRT2Q9H974 415 aaKnown RBP24.27■■□□□ 1.48
LIMS2-201ENST00000324938 TRIM37O94972 964 aa24.26■■□□□ 1.47
LIMS2-201ENST00000324938 SMARCA1P28370 1054 aa24.26■■□□□ 1.47
LIMS2-201ENST00000324938 RASGRP2Q7LDG7 609 aa24.26■■□□□ 1.47
LIMS2-201ENST00000324938 STAMQ92783 540 aa24.26■■□□□ 1.47
LIMS2-201ENST00000324938 CEP95Q96GE4 821 aa24.26■■□□□ 1.47
LIMS2-201ENST00000324938 GOLGA8FQ08AF8 430 aa24.26■■□□□ 1.47
LIMS2-201ENST00000324938 NCBP1Q09161 790 aaKnown RBP24.26■■□□□ 1.47
LIMS2-201ENST00000324938 GOLGA8DPQ0D2H9 430 aa24.26■■□□□ 1.47
LIMS2-201ENST00000324938 SMYD4Q8IYR2 804 aaPredicted RBP24.26■■□□□ 1.47
LIMS2-201ENST00000324938 CCDC12Q8WUD4 166 aaPredicted RBP24.26■■□□□ 1.47
LIMS2-201ENST00000324938 COA1Q9GZY4 146 aa24.26■■□□□ 1.47
LIMS2-201ENST00000324938 SUGT1Q9Y2Z0 365 aa24.26■■□□□ 1.47
LIMS2-201ENST00000324938 ATP6V0A2Q9Y487 856 aa24.26■■□□□ 1.47
LIMS2-201ENST00000324938 LAD1O00515 517 aa24.25■■□□□ 1.47
LIMS2-201ENST00000324938 ARHGAP6O43182 974 aa24.25■■□□□ 1.47
LIMS2-201ENST00000324938 GTF2IP78347 998 aa24.25■■□□□ 1.47
LIMS2-201ENST00000324938 INF2Q27J81 1249 aa24.25■■□□□ 1.47
LIMS2-201ENST00000324938 DTHD1Q6ZMT9 781 aa24.25■■□□□ 1.47
LIMS2-201ENST00000324938 KRT27Q7Z3Y8 459 aa24.25■■□□□ 1.47
LIMS2-201ENST00000324938 BLZF1Q9H2G9 400 aa24.25■■□□□ 1.47
LIMS2-201ENST00000324938 STX17P56962 302 aa24.25■■□□□ 1.47
LIMS2-201ENST00000324938 TC2NQ8N9U0 490 aa24.25■■□□□ 1.47
LIMS2-201ENST00000324938 DISC1Q9NRI5 854 aa24.25■■□□□ 1.47
LIMS2-201ENST00000324938 COL11A2P13942 1736 aaPredicted RBP24.25■■□□□ 1.47
LIMS2-201ENST00000324938 TMEM60Q9H2L4 133 aa24.24■■□□□ 1.47
LIMS2-201ENST00000324938 ADAMTSL1Q8N6G6 1762 aa24.23■■□□□ 1.47
LIMS2-201ENST00000324938 HMGB2P26583 209 aaKnown RBP24.23■■□□□ 1.47
LIMS2-201ENST00000324938 PRPHP41219 470 aa24.23■■□□□ 1.47
LIMS2-201ENST00000324938 STAT6P42226 847 aa24.23■■□□□ 1.47
LIMS2-201ENST00000324938 NAPAP54920 295 aa24.23■■□□□ 1.47
LIMS2-201ENST00000324938 TXNRD1Q16881 649 aa24.23■■□□□ 1.47
LIMS2-201ENST00000324938 RRP36Q96EU6 259 aaKnown RBP24.23■■□□□ 1.47
LIMS2-201ENST00000324938 CPVLQ9H3G5 476 aa24.23■■□□□ 1.47
LIMS2-201ENST00000324938 RMND1Q9NWS8 449 aa24.23■■□□□ 1.47
LIMS2-201ENST00000324938 CTNND2Q9UQB3 1225 aa24.23■■□□□ 1.47
LIMS2-201ENST00000324938 USP17L2Q6R6M4 530 aa24.23■■□□□ 1.47
LIMS2-201ENST00000324938 KRT25Q7Z3Z0 450 aa24.23■■□□□ 1.47
LIMS2-201ENST00000324938 CTAGE1Q96RT6 745 aa24.23■■□□□ 1.47
LIMS2-201ENST00000324938 STX10O60499 249 aa24.22■■□□□ 1.47
LIMS2-201ENST00000324938 KARSQ15046 597 aaKnown RBP24.22■■□□□ 1.47
LIMS2-201ENST00000324938 ZNF658Q5TYW1 1059 aaPredicted RBP24.22■■□□□ 1.47
LIMS2-201ENST00000324938 PROM2Q8N271 834 aa24.22■■□□□ 1.47
LIMS2-201ENST00000324938 BAG1Q99933 345 aaPredicted RBP24.22■■□□□ 1.47
LIMS2-201ENST00000324938 ADD3Q9UEY8 706 aaKnown RBP24.22■■□□□ 1.47
LIMS2-201ENST00000324938 CDC25AP30304 524 aa24.22■■□□□ 1.47
LIMS2-201ENST00000324938 GABPAQ06546 454 aa24.22■■□□□ 1.47
LIMS2-201ENST00000324938 RRAGBQ5VZM2 374 aa24.22■■□□□ 1.47
LIMS2-201ENST00000324938 CCSER1Q9C0I3 900 aa24.22■■□□□ 1.47
LIMS2-201ENST00000324938 C6orf50Q9HD87 102 aa24.22■■□□□ 1.47
LIMS2-201ENST00000324938 SEC63Q9UGP8 760 aaKnown RBP24.22■■□□□ 1.47
LIMS2-201ENST00000324938 RWDD2AQ9UIY3 292 aa24.22■■□□□ 1.47
LIMS2-201ENST00000324938 GREB1LQ9C091 1923 aaPredicted RBP24.21■■□□□ 1.47
LIMS2-201ENST00000324938 C10orf71Q711Q0 1435 aa24.21■■□□□ 1.47
LIMS2-201ENST00000324938 RIMBP2O15034 1052 aa24.21■■□□□ 1.47
LIMS2-201ENST00000324938 RPN1P04843 607 aaKnown RBP24.21■■□□□ 1.47
LIMS2-201ENST00000324938 GNA11P29992 359 aa24.21■■□□□ 1.47
LIMS2-201ENST00000324938 SYT10Q6XYQ8 523 aa24.21■■□□□ 1.47
LIMS2-201ENST00000324938 ZSCAN12O43309 604 aa24.2■■□□□ 1.47
LIMS2-201ENST00000324938 PBX1P40424 430 aa24.2■■□□□ 1.47
LIMS2-201ENST00000324938 NAALADL2Q58DX5 795 aa24.2■■□□□ 1.47
LIMS2-201ENST00000324938 REXO1L1PQ8IX06 675 aa24.2■■□□□ 1.47
LIMS2-201ENST00000324938 PDCL2Q8N4E4 241 aa24.2■■□□□ 1.47
LIMS2-201ENST00000324938 L2HGDHQ9H9P8 463 aa24.2■■□□□ 1.47
LIMS2-201ENST00000324938 ETF1P62495 437 aaKnown RBP24.2■■□□□ 1.46
LIMS2-201ENST00000324938 NONOQ15233 471 aaKnown RBP eCLIP24.2■■□□□ 1.46
LIMS2-201ENST00000324938 HOMER1Q86YM7 354 aa24.2■■□□□ 1.46
LIMS2-201ENST00000324938 RIOX1Q9H6W3 641 aa24.2■■□□□ 1.46
LIMS2-201ENST00000324938 MYH4Q9Y623 1939 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 ESYT2A0FGR8 921 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 SMCO2A6NFE2 343 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 TEX33O43247 280 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 SRGNP10124 158 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 ADKP55263 362 aaKnown RBP24.19■■□□□ 1.46
LIMS2-201ENST00000324938 PAK1Q13153 545 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 CERS5Q8N5B7 392 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 MTMR4Q9NYA4 1195 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 ZNF215Q9UL58 517 aaPredicted RBP24.19■■□□□ 1.46
LIMS2-201ENST00000324938 PHLPP2Q6ZVD8 1323 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 USP17L5A8MUK1 530 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 hCG_1984214I3L0E3 225 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 MYL1P05976 194 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 PDHBP11177 359 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 NPR1P16066 1061 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 PICALMQ13492 652 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 ZNF713Q8N859 430 aaPredicted RBP24.19■■□□□ 1.46
LIMS2-201ENST00000324938 PIGSQ96S52 555 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 CCDC94Q9BW85 323 aaPredicted RBP24.19■■□□□ 1.46
LIMS2-201ENST00000324938 PPP2R2CQ9Y2T4 447 aa24.19■■□□□ 1.46
LIMS2-201ENST00000324938 IGKV6D-41A0A0C4DH26 115 aa24.18■■□□□ 1.46
LIMS2-201ENST00000324938 PP2D1A8MPX8 630 aa24.18■■□□□ 1.46
LIMS2-201ENST00000324938 UBA7P41226 1012 aa24.18■■□□□ 1.46
LIMS2-201ENST00000324938 FILIP1LQ4L180 1135 aa24.18■■□□□ 1.46
LIMS2-201ENST00000324938 SOGA3Q5TF21 947 aa24.18■■□□□ 1.46
LIMS2-201ENST00000324938 ERO1AQ96HE7 468 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms