RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ERO1BQ86YB8 467 aa17.68■□□□□ 0.42
PRPF3-201ENST00000324862 ZNF784Q8NCA9 323 aaPredicted RBP17.68■□□□□ 0.42
PRPF3-201ENST00000324862 RPAP3Q9H6T3 665 aaPredicted RBP17.68■□□□□ 0.42
PRPF3-201ENST00000324862 PHIPQ8WWQ0 1821 aa17.68■□□□□ 0.42
PRPF3-201ENST00000324862 SCG2P13521 617 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 PFKFB3Q16875 520 aaPredicted RBP17.67■□□□□ 0.42
PRPF3-201ENST00000324862 TREML2Q5T2D2 321 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 KRT40Q6A162 431 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 WWC2Q6AWC2 1192 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 HEATR3Q7Z4Q2 680 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 C2orf69Q8N8R5 385 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 FBXO18Q8NFZ0 1043 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 TNPO1Q92973 898 aaKnown RBP17.67■□□□□ 0.42
PRPF3-201ENST00000324862 TANGO6Q9C0B7 1094 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 PRR12Q9ULL5 1215 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 CIZ1Q9ULV3 898 aaPredicted RBP17.67■□□□□ 0.42
PRPF3-201ENST00000324862 SYNPO2Q9UMS6 1093 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 STAT2P52630 851 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 COA7Q96BR5 231 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 SLC10A4Q96EP9 437 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 WNK4Q96J92 1243 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 LZTS2Q9BRK4 669 aa17.67■□□□□ 0.42
PRPF3-201ENST00000324862 PASKQ96RG2 1323 aa17.66■□□□□ 0.42
PRPF3-201ENST00000324862 ZSCAN22P10073 491 aaPredicted RBP17.66■□□□□ 0.42
PRPF3-201ENST00000324862 PPATQ06203 517 aa17.66■□□□□ 0.42
PRPF3-201ENST00000324862 MCTP1Q6DN14 999 aa17.66■□□□□ 0.42
PRPF3-201ENST00000324862 RRP36Q96EU6 259 aaKnown RBP17.66■□□□□ 0.42
PRPF3-201ENST00000324862 KIF28PB7ZC32 967 aa17.66■□□□□ 0.42
PRPF3-201ENST00000324862 PDCP20941 246 aa17.66■□□□□ 0.42
PRPF3-201ENST00000324862 NUCB2P80303 420 aa17.66■□□□□ 0.42
PRPF3-201ENST00000324862 SYDE2Q5VT97 1194 aa17.66■□□□□ 0.42
PRPF3-201ENST00000324862 WDR46O15213 610 aaKnown RBP17.65■□□□□ 0.42
PRPF3-201ENST00000324862 USP14P54578 494 aa17.65■□□□□ 0.42
PRPF3-201ENST00000324862 HUNKP57058 714 aa17.65■□□□□ 0.42
PRPF3-201ENST00000324862 CDC37Q16543 378 aaPredicted RBP17.65■□□□□ 0.42
PRPF3-201ENST00000324862 QRICH1Q2TAL8 776 aa17.65■□□□□ 0.42
PRPF3-201ENST00000324862 OXER1Q8TDS5 423 aa17.65■□□□□ 0.42
PRPF3-201ENST00000324862 LPAR1Q92633 364 aa17.65■□□□□ 0.42
PRPF3-201ENST00000324862 PEX10O60683 326 aa17.64■□□□□ 0.42
PRPF3-201ENST00000324862 FLOT1O75955 427 aa17.64■□□□□ 0.42
PRPF3-201ENST00000324862 WDR33Q9C0J8 1336 aaKnown RBP17.64■□□□□ 0.41
PRPF3-201ENST00000324862 F13A1P00488 732 aa17.64■□□□□ 0.41
PRPF3-201ENST00000324862 CCDC174Q6PII3 467 aa17.64■□□□□ 0.41
PRPF3-201ENST00000324862 BTNL9Q6UXG8 535 aa17.64■□□□□ 0.41
PRPF3-201ENST00000324862 GADL1Q6ZQY3 521 aa17.64■□□□□ 0.41
PRPF3-201ENST00000324862 SEC63Q9UGP8 760 aaKnown RBP17.64■□□□□ 0.41
PRPF3-201ENST00000324862 KIF3AQ9Y496 699 aa17.64■□□□□ 0.41
PRPF3-201ENST00000324862 C19orf81C9J6K1 198 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 STXBP3O00186 592 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 ZBTB5O15062 677 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 NR5A1Q13285 461 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 NPY5RQ15761 445 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 USH1GQ495M9 461 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 NOM1Q5C9Z4 860 aaKnown RBP17.63■□□□□ 0.41
PRPF3-201ENST00000324862 MTMR8Q96EF0 704 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 TMOD4Q9NZQ9 345 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 BTBD18B2RXH4 712 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 SMARCA1P28370 1054 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 PPIL2Q13356 520 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 SMC1BQ8NDV3 1235 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 WASF1Q92558 559 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 C12orf42Q96LP6 360 aa17.63■□□□□ 0.41
PRPF3-201ENST00000324862 A0A0G2JLL6 359 aaPredicted RBP17.62■□□□□ 0.41
PRPF3-201ENST00000324862 FKBP1BP68106 108 aa17.62■□□□□ 0.41
PRPF3-201ENST00000324862 MOGSQ13724 837 aa17.62■□□□□ 0.41
PRPF3-201ENST00000324862 SH3D19Q5HYK7 790 aa17.62■□□□□ 0.41
PRPF3-201ENST00000324862 PRRT2Q7Z6L0 340 aaPredicted RBP17.62■□□□□ 0.41
PRPF3-201ENST00000324862 SAPCD2Q86UD0 394 aa17.62■□□□□ 0.41
PRPF3-201ENST00000324862 BARHL2Q9NY43 387 aa17.62■□□□□ 0.41
PRPF3-201ENST00000324862 PNMA6FA0A0J9YX94 578 aa17.62■□□□□ 0.41
PRPF3-201ENST00000324862 TOMM70O94826 608 aa17.62■□□□□ 0.41
PRPF3-201ENST00000324862 MMP1P03956 469 aa17.62■□□□□ 0.41
PRPF3-201ENST00000324862 RASGRP4Q8TDF6 673 aa17.62■□□□□ 0.41
PRPF3-201ENST00000324862 ATG4CQ96DT6 458 aa17.62■□□□□ 0.41
PRPF3-201ENST00000324862 FEM1BQ9UK73 627 aa17.62■□□□□ 0.41
PRPF3-201ENST00000324862 KCNH4Q9UQ05 1017 aa17.62■□□□□ 0.41
PRPF3-201ENST00000324862 KIF23Q02241 960 aaPredicted RBP17.61■□□□□ 0.41
PRPF3-201ENST00000324862 RESTQ13127 1097 aa17.61■□□□□ 0.41
PRPF3-201ENST00000324862 TRIM29Q14134 588 aa17.61■□□□□ 0.41
PRPF3-201ENST00000324862 DIS3L2Q8IYB7 885 aaKnown RBP17.61■□□□□ 0.41
PRPF3-201ENST00000324862 RBM46Q8TBY0 533 aaKnown RBP17.61■□□□□ 0.41
PRPF3-201ENST00000324862 SLF1Q9BQI6 1058 aa17.61■□□□□ 0.41
PRPF3-201ENST00000324862 PHF20Q9BVI0 1012 aa17.61■□□□□ 0.41
PRPF3-201ENST00000324862 FAM205CA6NFA0 338 aa17.61■□□□□ 0.41
PRPF3-201ENST00000324862 NAPAP54920 295 aa17.61■□□□□ 0.41
PRPF3-201ENST00000324862 EARS2Q5JPH6 523 aaKnown RBP17.61■□□□□ 0.41
PRPF3-201ENST00000324862 POTEEQ6S8J3 1075 aa17.61■□□□□ 0.41
PRPF3-201ENST00000324862 CHURC1Q8WUH1 139 aa17.61■□□□□ 0.41
PRPF3-201ENST00000324862 NLRP5P59047 1200 aa17.6■□□□□ 0.41
PRPF3-201ENST00000324862 CPXCR1Q8N123 301 aa17.6■□□□□ 0.41
PRPF3-201ENST00000324862 FTOQ9C0B1 505 aaKnown RBP eCLIP17.6■□□□□ 0.41
PRPF3-201ENST00000324862 CXCL11O14625 94 aa17.6■□□□□ 0.41
PRPF3-201ENST00000324862 CATSPERGQ6ZRH7 1159 aa17.6■□□□□ 0.41
PRPF3-201ENST00000324862 PRPF38AQ8NAV1 312 aaKnown RBP17.6■□□□□ 0.41
PRPF3-201ENST00000324862 AGBL1Q96MI9 1066 aa17.6■□□□□ 0.41
PRPF3-201ENST00000324862 PPP1R9AQ9ULJ8 1098 aa17.6■□□□□ 0.41
PRPF3-201ENST00000324862 PCDHA1Q9Y5I3 950 aa17.6■□□□□ 0.41
PRPF3-201ENST00000324862 MYH6P13533 1939 aa17.6■□□□□ 0.41
PRPF3-201ENST00000324862 MS4A4AQ96JQ5 239 aa17.59■□□□□ 0.41
PRPF3-201ENST00000324862 RANBP17Q9H2T7 1088 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms