RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 ZMYND12Q9H0C1 365 aa19.37■□□□□ 0.69
SSR4-201ENST00000320857 C6orf50Q9HD87 102 aa19.37■□□□□ 0.69
SSR4-201ENST00000320857 SERTAD1Q9UHV2 236 aa19.37■□□□□ 0.69
SSR4-201ENST00000320857 PCDHA6Q9UN73 950 aa19.37■□□□□ 0.69
SSR4-201ENST00000320857 PCDHA8Q9Y5H6 950 aa19.37■□□□□ 0.69
SSR4-201ENST00000320857 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.37■□□□□ 0.696e-9■□□□□ 9.1
SSR4-201ENST00000320857 COL4A5P29400 1685 aa19.37■□□□□ 0.69
SSR4-201ENST00000320857 ZNF500O60304 480 aaPredicted RBP19.36■□□□□ 0.69
SSR4-201ENST00000320857 ENTPD3O75355 529 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 CDC25BP30305 580 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 MCM7P33993 719 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 MDM2Q00987 491 aaPredicted RBP19.36■□□□□ 0.69
SSR4-201ENST00000320857 TCP10Q12799 353 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 POSTNQ15063 836 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 CFAP100Q494V2 611 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 ARL6IP4Q66PJ3 421 aaKnown RBP19.36■□□□□ 0.69
SSR4-201ENST00000320857 RASGRP2Q7LDG7 609 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 HOMER1Q86YM7 354 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 FOXP4Q8IVH2 680 aaPredicted RBP19.36■□□□□ 0.69
SSR4-201ENST00000320857 ZSCAN29Q8IWY8 852 aaPredicted RBP19.36■□□□□ 0.69
SSR4-201ENST00000320857 PYM1Q9BRP8 204 aaKnown RBP19.36■□□□□ 0.69
SSR4-201ENST00000320857 YBX3P16989 372 aaKnown RBP eCLIP19.36■□□□□ 0.694e-12■■■□□ 16.3
SSR4-201ENST00000320857 CACNB3P54284 484 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 KRT25Q7Z3Z0 450 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 PIGSQ96S52 555 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 GMLQ99445 158 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 CPVLQ9H3G5 476 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 VAT1LQ9HCJ6 419 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 ZNRF3Q9ULT6 936 aa19.36■□□□□ 0.69
SSR4-201ENST00000320857 FRMPD2Q68DX3 1309 aaPredicted RBP19.35■□□□□ 0.69
SSR4-201ENST00000320857 ESYT2A0FGR8 921 aa19.35■□□□□ 0.69
SSR4-201ENST00000320857 PSMD14O00487 310 aa19.35■□□□□ 0.69
SSR4-201ENST00000320857 ADAMTS3O15072 1205 aa19.35■□□□□ 0.69
SSR4-201ENST00000320857 ACTN4O43707 911 aaKnown RBP19.35■□□□□ 0.69
SSR4-201ENST00000320857 EIF6P56537 245 aaKnown RBP19.35■□□□□ 0.69
SSR4-201ENST00000320857 DRC7Q8IY82 874 aa19.35■□□□□ 0.69
SSR4-201ENST00000320857 NIM1KQ8IY84 436 aa19.35■□□□□ 0.69
SSR4-201ENST00000320857 SPC24Q8NBT2 197 aa19.35■□□□□ 0.69
SSR4-201ENST00000320857 RASGRP4Q8TDF6 673 aa19.35■□□□□ 0.69
SSR4-201ENST00000320857 SYMPKQ92797 1274 aaKnown RBP19.35■□□□□ 0.69
SSR4-201ENST00000320857 PCDHA5Q9Y5H7 936 aa19.35■□□□□ 0.69
SSR4-201ENST00000320857 BAZ2BQ9UIF8 2168 aaKnown RBP19.35■□□□□ 0.69
SSR4-201ENST00000320857 VWA3AA6NCI4 1184 aa19.34■□□□□ 0.69
SSR4-201ENST00000320857 SMCO2A6NFE2 343 aa19.34■□□□□ 0.69
SSR4-201ENST00000320857 DDTLA6NHG4 134 aaPredicted RBP19.34■□□□□ 0.69
SSR4-201ENST00000320857 IKBKBO14920 756 aa19.34■□□□□ 0.69
SSR4-201ENST00000320857 RAD17O75943 681 aa19.34■□□□□ 0.69
SSR4-201ENST00000320857 ZNF543Q08ER8 600 aa19.34■□□□□ 0.69
SSR4-201ENST00000320857 CERKLQ49MI3 558 aaPredicted RBP19.34■□□□□ 0.69
SSR4-201ENST00000320857 GPATCH4Q5T3I0 446 aaKnown RBP19.34■□□□□ 0.69
SSR4-201ENST00000320857 USP49Q70CQ1 688 aa19.34■□□□□ 0.69
SSR4-201ENST00000320857 SMARCE1Q969G3 411 aa19.34■□□□□ 0.69
SSR4-201ENST00000320857 MRFAP1L1Q96HT8 127 aa19.34■□□□□ 0.69
SSR4-201ENST00000320857 UBA5Q9GZZ9 404 aa19.34■□□□□ 0.69
SSR4-201ENST00000320857 TDRD3Q9H7E2 651 aaKnown RBP19.34■□□□□ 0.69
SSR4-201ENST00000320857 SIPA1L1O43166 1804 aa19.34■□□□□ 0.69
SSR4-201ENST00000320857 FER1L6Q2WGJ9 1857 aa19.34■□□□□ 0.69
SSR4-201ENST00000320857 GREB1LQ9C091 1923 aaPredicted RBP19.33■□□□□ 0.69
SSR4-201ENST00000320857 PDILTQ8N807 584 aa19.33■□□□□ 0.69
SSR4-201ENST00000320857 EPSTI1Q96J88 318 aa19.33■□□□□ 0.69
SSR4-201ENST00000320857 PRMT6Q96LA8 375 aaPredicted RBP19.33■□□□□ 0.69
SSR4-201ENST00000320857 DNAJC18Q9H819 358 aa19.33■□□□□ 0.69
SSR4-201ENST00000320857 TMOD2Q9NZR1 351 aa19.33■□□□□ 0.69
SSR4-201ENST00000320857 HDAC9Q9UKV0 1011 aa19.33■□□□□ 0.69
SSR4-201ENST00000320857 COL2A1P02458 1487 aaPredicted RBP19.33■□□□□ 0.69
SSR4-201ENST00000320857 SMC2O95347 1197 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 SLFN14P0C7P3 912 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 LONP1P36776 959 aaKnown RBP19.33■□□□□ 0.68
SSR4-201ENST00000320857 ATP2B2Q01814 1243 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 NT5DC1Q5TFE4 455 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 SH3BP5LQ7L8J4 393 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 CLEC10AQ8IUN9 316 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 C4orf32Q8N8J7 132 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 TRIML1Q8N9V2 468 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 DHX58Q96C10 678 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 KANSL2Q9H9L4 492 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 GPCPD1Q9NPB8 672 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 NYAP2Q9P242 653 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 DACH1Q9UI36 760 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 ATRNL1Q5VV63 1379 aa19.33■□□□□ 0.68
SSR4-201ENST00000320857 LAD1O00515 517 aa19.32■□□□□ 0.68
SSR4-201ENST00000320857 FOXN1O15353 648 aa19.32■□□□□ 0.68
SSR4-201ENST00000320857 NONOQ15233 471 aaKnown RBP eCLIP19.32■□□□□ 0.68
SSR4-201ENST00000320857 INF2Q27J81 1249 aa19.32■□□□□ 0.68
SSR4-201ENST00000320857 CCDC96Q2M329 555 aa19.32■□□□□ 0.68
SSR4-201ENST00000320857 ISM2Q6H9L7 571 aa19.32■□□□□ 0.68
SSR4-201ENST00000320857 PPP1R18Q6NYC8 613 aa19.32■□□□□ 0.68
SSR4-201ENST00000320857 TATDN1Q6P1N9 297 aa19.32■□□□□ 0.68
SSR4-201ENST00000320857 ARHGAP27Q6ZUM4 889 aa19.32■□□□□ 0.68
SSR4-201ENST00000320857 AGBL3Q8NEM8 1001 aa19.32■□□□□ 0.68
SSR4-201ENST00000320857 MKL1Q969V6 931 aa19.32■□□□□ 0.68
SSR4-201ENST00000320857 TAOK3Q9H2K8 898 aa19.32■□□□□ 0.68
SSR4-201ENST00000320857 TXLNAP40222 546 aa19.31■□□□□ 0.68
SSR4-201ENST00000320857 SARSP49591 514 aaKnown RBP19.31■□□□□ 0.68
SSR4-201ENST00000320857 TMEM179Q6ZVK1 233 aa19.31■□□□□ 0.68
SSR4-201ENST00000320857 TTC12Q9H892 705 aaPredicted RBP19.31■□□□□ 0.68
SSR4-201ENST00000320857 MAN1B1Q9UKM7 699 aa19.31■□□□□ 0.68
SSR4-201ENST00000320857 PNMA6FA0A0J9YX94 578 aa19.3■□□□□ 0.68
SSR4-201ENST00000320857 SPDYE2BA6NHP3 402 aa19.3■□□□□ 0.68
SSR4-201ENST00000320857 SPDYE6P0CI01 402 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms