RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 MFSD6Q6ZSS7 791 aa11.74□□□□□ -0.53
CCDC65-202ENST00000320516 DPP9Q86TI2 863 aa11.74□□□□□ -0.53
CCDC65-202ENST00000320516 TEX13BQ9BXU2 312 aa11.74□□□□□ -0.53
CCDC65-202ENST00000320516 OGDHLQ9ULD0 1010 aa11.74□□□□□ -0.53
CCDC65-202ENST00000320516 RIPK3Q9Y572 518 aa11.74□□□□□ -0.53
CCDC65-202ENST00000320516 LAMA4Q16363 1823 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 ZNF213O14771 459 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 PLA2G6O60733 806 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 FCER1AP12319 257 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 MCCP23508 829 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 CHMLP26374 656 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 CYP2C19P33261 490 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 COPB2P35606 906 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 SLC1A4P43007 532 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 MFSD14CQ5VZR4 134 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 LHX8Q68G74 356 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 RCSD1Q6JBY9 416 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 RASGRP2Q7LDG7 609 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 KIFC2Q96AC6 838 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 RNF41Q9H4P4 317 aaPredicted RBP11.73□□□□□ -0.53
CCDC65-202ENST00000320516 TOMM22Q9NS69 142 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 NEDD4P46934 1319 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 RAD50Q92878 1312 aa11.73□□□□□ -0.53
CCDC65-202ENST00000320516 TMEM232C9JQI7 657 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 NT5C2P49902 561 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 STAT2P52630 851 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 OAZ1P54368 228 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 SNRNP48Q6IEG0 339 aaKnown RBP11.72□□□□□ -0.53
CCDC65-202ENST00000320516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC65-202ENST00000320516 ANKLE1Q8NAG6 615 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 TRPV1Q8NER1 839 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 MAML3Q96JK9 1138 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 TMEM47Q9BQJ4 181 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 ZBED4O75132 1171 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 FDX1P10109 184 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 TOP1P11387 765 aaKnown RBP11.72□□□□□ -0.53
CCDC65-202ENST00000320516 CYBAP13498 195 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 ZNF792Q3KQV3 632 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 KCTD1Q719H9 257 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 FAM160B2Q86V87 743 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 CPXCR1Q8N123 301 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 CHURC1Q8WUH1 139 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 ESR2Q92731 530 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 TTC14Q96N46 770 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 MMP19Q99542 508 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 RAVER2Q9HCJ3 691 aaKnown RBP11.72□□□□□ -0.53
CCDC65-202ENST00000320516 SLC5A4Q9NY91 659 aa11.72□□□□□ -0.53
CCDC65-202ENST00000320516 ZNFX1Q9P2E3 1918 aaKnown RBP11.71□□□□□ -0.53
CCDC65-202ENST00000320516 ZNF536O15090 1300 aa11.71□□□□□ -0.54
CCDC65-202ENST00000320516 PGK2P07205 417 aa11.71□□□□□ -0.54
CCDC65-202ENST00000320516 KCTD2Q14681 263 aa11.71□□□□□ -0.54
CCDC65-202ENST00000320516 IMMTQ16891 758 aaKnown RBP11.71□□□□□ -0.54
CCDC65-202ENST00000320516 DIS3LQ8TF46 1054 aaKnown RBP11.71□□□□□ -0.54
CCDC65-202ENST00000320516 DCAF4Q8WV16 495 aa11.71□□□□□ -0.54
CCDC65-202ENST00000320516 PAWRQ96IZ0 340 aaKnown RBP11.71□□□□□ -0.54
CCDC65-202ENST00000320516 CTNNA3Q9UI47 895 aa11.71□□□□□ -0.54
CCDC65-202ENST00000320516 DIS3Q9Y2L1 958 aaKnown RBP11.71□□□□□ -0.54
CCDC65-202ENST00000320516 DNAJC25-GNG10A0A024R161 153 aa11.7□□□□□ -0.54
CCDC65-202ENST00000320516 SGSM2O43147 1006 aa11.7□□□□□ -0.54
CCDC65-202ENST00000320516 SNHG28P0DPA3 235 aa11.7□□□□□ -0.54
CCDC65-202ENST00000320516 BTNL9Q6UXG8 535 aa11.7□□□□□ -0.54
CCDC65-202ENST00000320516 CENPQQ7L2Z9 268 aaPredicted RBP11.7□□□□□ -0.54
CCDC65-202ENST00000320516 RUFY2Q8WXA3 655 aa11.7□□□□□ -0.54
CCDC65-202ENST00000320516 CHMP4CQ96CF2 233 aa11.7□□□□□ -0.54
CCDC65-202ENST00000320516 PRR12Q9ULL5 1215 aa11.7□□□□□ -0.54
CCDC65-202ENST00000320516 B4E1Z4 1266 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 KDM4AO75164 1064 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 PDHBP11177 359 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 PTH1RQ03431 593 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 TTBK2Q6IQ55 1244 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 NECAB2Q7Z6G3 386 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 DGKHQ86XP1 1220 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 CHST13Q8NET6 341 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 ANKS1AQ92625 1134 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 ZKSCAN3Q9BRR0 538 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 HTATIP2Q9BUP3 242 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 DDX20Q9UHI6 824 aaKnown RBP11.69□□□□□ -0.54
CCDC65-202ENST00000320516 FRMPD3Q5JV73 1810 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 MSCO60682 206 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 HOXD11P31277 338 aaPredicted RBP11.69□□□□□ -0.54
CCDC65-202ENST00000320516 TINF2Q9BSI4 451 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 ZSWIM5Q9P217 1185 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 ISY1Q9ULR0 285 aaKnown RBP11.69□□□□□ -0.54
CCDC65-202ENST00000320516 MTMR7Q9Y216 660 aa11.69□□□□□ -0.54
CCDC65-202ENST00000320516 CTDP1Q9Y5B0 961 aaPredicted RBP11.69□□□□□ -0.54
CCDC65-202ENST00000320516 SEPT4O43236 478 aa11.68□□□□□ -0.54
CCDC65-202ENST00000320516 COL6A1P12109 1028 aa11.68□□□□□ -0.54
CCDC65-202ENST00000320516 IKQ13123 557 aaPredicted RBP11.68□□□□□ -0.54
CCDC65-202ENST00000320516 CCDC96Q2M329 555 aa11.68□□□□□ -0.54
CCDC65-202ENST00000320516 PRAMEF19Q5SWL8 479 aa11.68□□□□□ -0.54
CCDC65-202ENST00000320516 SKAP1Q86WV1 359 aa11.68□□□□□ -0.54
CCDC65-202ENST00000320516 IQCA1Q86XH1 822 aa11.68□□□□□ -0.54
CCDC65-202ENST00000320516 DPF3Q92784 378 aa11.68□□□□□ -0.54
CCDC65-202ENST00000320516 FGD4Q96M96 766 aa11.68□□□□□ -0.54
CCDC65-202ENST00000320516 AGBL1Q96MI9 1066 aa11.68□□□□□ -0.54
CCDC65-202ENST00000320516 KRT23Q9C075 422 aa11.68□□□□□ -0.54
CCDC65-202ENST00000320516 RANBP17Q9H2T7 1088 aaKnown RBP11.68□□□□□ -0.54
CCDC65-202ENST00000320516 FBXO40Q9UH90 709 aa11.68□□□□□ -0.54
CCDC65-202ENST00000320516 NRBP1Q9UHY1 535 aa11.68□□□□□ -0.54
CCDC65-202ENST00000320516 PLXNA1Q9UIW2 1896 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms