RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 NAA15Q9BXJ9 866 aaKnown RBP16.77■□□□□ 0.28
TFE3-201ENST00000315869 VEGFAP15692 232 aaPredicted RBP16.77■□□□□ 0.27
TFE3-201ENST00000315869 CAVIN4Q5BKX8 364 aa16.77■□□□□ 0.27
TFE3-201ENST00000315869 CYP26C1Q6V0L0 522 aa16.77■□□□□ 0.27
TFE3-201ENST00000315869 FAN1Q9Y2M0 1017 aa16.77■□□□□ 0.27
TFE3-201ENST00000315869 SPATA31A6Q5VVP1 1343 aa16.76■□□□□ 0.27
TFE3-201ENST00000315869 RNF225M0QZC1 329 aaPredicted RBP16.76■□□□□ 0.27
TFE3-201ENST00000315869 ATP8B1O43520 1251 aa16.76■□□□□ 0.27
TFE3-201ENST00000315869 VSNL1P62760 191 aa16.76■□□□□ 0.27
TFE3-201ENST00000315869 CLEC4GQ6UXB4 293 aa16.76■□□□□ 0.27
TFE3-201ENST00000315869 DRC1Q96MC2 740 aa16.76■□□□□ 0.27
TFE3-201ENST00000315869 HDAC6Q9UBN7 1215 aa16.76■□□□□ 0.27
TFE3-201ENST00000315869 BMP15O95972 392 aa16.76■□□□□ 0.27
TFE3-201ENST00000315869 UBA7P41226 1012 aa16.76■□□□□ 0.27
TFE3-201ENST00000315869 PKN1Q16512 942 aa16.76■□□□□ 0.27
TFE3-201ENST00000315869 CCDC122Q5T0U0 273 aa16.76■□□□□ 0.27
TFE3-201ENST00000315869 LUC7L2Q9Y383 392 aaKnown RBP16.76■□□□□ 0.27
TFE3-201ENST00000315869 SRGAP2O75044 1071 aa16.76■□□□□ 0.27
TFE3-201ENST00000315869 ERVK-24P63145 666 aa16.76■□□□□ 0.27
TFE3-201ENST00000315869 NOA1Q8NC60 698 aaKnown RBP16.76■□□□□ 0.27
TFE3-201ENST00000315869 CWC15Q9P013 229 aaKnown RBP16.76■□□□□ 0.27
TFE3-201ENST00000315869 ZNF219Q9P2Y4 722 aaPredicted RBP16.76■□□□□ 0.27
TFE3-201ENST00000315869 CCDC194A0A1B0GVG4 234 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 PP2D1A8MPX8 630 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 TRIM21P19474 475 aaKnown RBP16.75■□□□□ 0.27
TFE3-201ENST00000315869 CCDC148Q8NFR7 591 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 SHISA4Q96DD7 197 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 ABHD10Q9NUJ1 306 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 WNK3Q9BYP7 1800 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 SPAG1Q07617 926 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 RAD51AP2Q09MP3 1159 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 MSL1Q68DK7 614 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 FAM84BQ96KN1 310 aaPredicted RBP16.75■□□□□ 0.27
TFE3-201ENST00000315869 PHF20Q9BVI0 1012 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 TRIM34Q9BYJ4 488 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 ANKZF1Q9H8Y5 726 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 MYO6Q9UM54 1294 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 EPN1Q9Y6I3 576 aaPredicted RBP16.75■□□□□ 0.27
TFE3-201ENST00000315869 CNTNAP4Q9C0A0 1308 aa16.75■□□□□ 0.27
TFE3-201ENST00000315869 POTEB2H3BUK9 544 aa16.74■□□□□ 0.27
TFE3-201ENST00000315869 RPN1P04843 607 aaKnown RBP16.74■□□□□ 0.27
TFE3-201ENST00000315869 SPEF2Q9C093 1822 aa16.74■□□□□ 0.27
TFE3-201ENST00000315869 XDHP47989 1333 aa16.74■□□□□ 0.27
TFE3-201ENST00000315869 PRPF3O43395 683 aaKnown RBP16.74■□□□□ 0.27
TFE3-201ENST00000315869 CYP2D6P10635 497 aa16.74■□□□□ 0.27
TFE3-201ENST00000315869 RASGRP2Q7LDG7 609 aa16.74■□□□□ 0.27
TFE3-201ENST00000315869 MACROD2A1Z1Q3 448 aa16.74■□□□□ 0.27
TFE3-201ENST00000315869 PRDX5P30044 214 aa16.74■□□□□ 0.27
TFE3-201ENST00000315869 PRCPP42785 496 aa16.74■□□□□ 0.27
TFE3-201ENST00000315869 MATR3P43243 847 aaKnown RBP eCLIP16.74■□□□□ 0.27
TFE3-201ENST00000315869 SRBD1Q8N5C6 995 aaKnown RBP16.74■□□□□ 0.27
TFE3-201ENST00000315869 CNBD1Q8NA66 436 aa16.74■□□□□ 0.27
TFE3-201ENST00000315869 JADE2Q9NQC1 790 aa16.74■□□□□ 0.27
TFE3-201ENST00000315869 ZNHIT6Q9NWK9 470 aaKnown RBP16.74■□□□□ 0.27
TFE3-201ENST00000315869 STIM1Q13586 685 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 SEC23AQ15436 765 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 CCDC178Q5BJE1 867 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 FKBP15Q5T1M5 1219 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 PLEKHA4Q9H4M7 779 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 MYH3P11055 1940 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 ANKRD65E5RJM6 399 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 TCP11X2Q5H9J9 407 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 CDKAL1Q5VV42 579 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 APTXQ7Z2E3 356 aaKnown RBP16.73■□□□□ 0.27
TFE3-201ENST00000315869 RBM28Q9NW13 759 aaKnown RBP16.73■□□□□ 0.27
TFE3-201ENST00000315869 PARP1P09874 1014 aaKnown RBP16.73■□□□□ 0.27
TFE3-201ENST00000315869 SCG2P13521 617 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 KRT27Q7Z3Y8 459 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 HEATR3Q7Z4Q2 680 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 GBP3Q9H0R5 595 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 ACBD3Q9H3P7 528 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 BSDC1Q9NW68 430 aaPredicted RBP16.73■□□□□ 0.27
TFE3-201ENST00000315869 PNPLA7Q6ZV29 1317 aa16.73■□□□□ 0.27
TFE3-201ENST00000315869 TTC26A0AVF1 554 aa16.72■□□□□ 0.27
TFE3-201ENST00000315869 GTPBP6O43824 516 aaPredicted RBP16.72■□□□□ 0.27
TFE3-201ENST00000315869 MTIF2P46199 727 aaKnown RBP16.72■□□□□ 0.27
TFE3-201ENST00000315869 CASP8Q14790 479 aa16.72■□□□□ 0.27
TFE3-201ENST00000315869 ELOA2Q8IYF1 753 aaPredicted RBP16.72■□□□□ 0.27
TFE3-201ENST00000315869 PSMB7Q99436 277 aa16.72■□□□□ 0.27
TFE3-201ENST00000315869 MCM9Q9NXL9 1143 aa16.72■□□□□ 0.27
TFE3-201ENST00000315869 RSPH14Q9UHP6 348 aa16.72■□□□□ 0.27
TFE3-201ENST00000315869 STX8Q9UNK0 236 aa16.72■□□□□ 0.27
TFE3-201ENST00000315869 DNA2P51530 1060 aa16.72■□□□□ 0.27
TFE3-201ENST00000315869 MRPS25P82663 173 aaKnown RBP16.72■□□□□ 0.27
TFE3-201ENST00000315869 SF3B3Q15393 1217 aaKnown RBP16.72■□□□□ 0.27
TFE3-201ENST00000315869 BEND6Q5SZJ8 279 aaPredicted RBP16.72■□□□□ 0.27
TFE3-201ENST00000315869 TMTC3Q6ZXV5 915 aa16.72■□□□□ 0.27
TFE3-201ENST00000315869 OR8K1Q8NGG5 319 aa16.72■□□□□ 0.27
TFE3-201ENST00000315869 KAT14Q9H8E8 782 aa16.72■□□□□ 0.27
TFE3-201ENST00000315869 SPATA20Q8TB22 786 aa16.71■□□□□ 0.27
TFE3-201ENST00000315869 CCDC51Q96ER9 411 aa16.71■□□□□ 0.27
TFE3-201ENST00000315869 RABEP2Q9H5N1 569 aa16.71■□□□□ 0.27
TFE3-201ENST00000315869 VAT1LQ9HCJ6 419 aa16.71■□□□□ 0.27
TFE3-201ENST00000315869 RMND1Q9NWS8 449 aa16.71■□□□□ 0.27
TFE3-201ENST00000315869 NDUFA10O95299 355 aa16.71■□□□□ 0.27
TFE3-201ENST00000315869 CALM1P0DP23 149 aa16.71■□□□□ 0.27
TFE3-201ENST00000315869 CALM2P0DP24 149 aa16.71■□□□□ 0.27
TFE3-201ENST00000315869 CALM3P0DP25 149 aa16.71■□□□□ 0.27
TFE3-201ENST00000315869 TROAPQ12815 778 aa16.71■□□□□ 0.27
TFE3-201ENST00000315869 DTHD1Q6ZMT9 781 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms