RNA–Protein interactions for RNA: ENST00000311604.7

LSP1-201, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LSP1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-201ENST00000311604 VAT1LQ9HCJ6 419 aa20.13■□□□□ 0.81
LSP1-201ENST00000311604 HACL1Q9UJ83 578 aa20.13■□□□□ 0.81
LSP1-201ENST00000311604 PCDHA4Q9UN74 947 aa20.13■□□□□ 0.81
LSP1-201ENST00000311604 GOLGA6L4A6NEF3 574 aa20.13■□□□□ 0.81
LSP1-201ENST00000311604 HIRAP54198 1017 aaPredicted RBP20.13■□□□□ 0.81
LSP1-201ENST00000311604 SLFN13Q68D06 897 aa20.13■□□□□ 0.81
LSP1-201ENST00000311604 RBM43Q6ZSC3 357 aaKnown RBP20.13■□□□□ 0.81
LSP1-201ENST00000311604 HEATR3Q7Z4Q2 680 aa20.13■□□□□ 0.81
LSP1-201ENST00000311604 HOMER1Q86YM7 354 aa20.13■□□□□ 0.81
LSP1-201ENST00000311604 ADGRF4Q8IZF3 695 aa20.13■□□□□ 0.81
LSP1-201ENST00000311604 BLIDQ8IZY5 108 aa20.13■□□□□ 0.81
LSP1-201ENST00000311604 RASGRP4Q8TDF6 673 aa20.13■□□□□ 0.81
LSP1-201ENST00000311604 DCAF4Q8WV16 495 aa20.13■□□□□ 0.81
LSP1-201ENST00000311604 RRP36Q96EU6 259 aaKnown RBP20.13■□□□□ 0.81
LSP1-201ENST00000311604 NDUFB10O96000 172 aa20.12■□□□□ 0.81
LSP1-201ENST00000311604 XRCC6P12956 609 aaKnown RBP eCLIP20.12■□□□□ 0.81
LSP1-201ENST00000311604 SLC16A2P36021 539 aa20.12■□□□□ 0.81
LSP1-201ENST00000311604 GPATCH4Q5T3I0 446 aaKnown RBP20.12■□□□□ 0.81
LSP1-201ENST00000311604 FAM177A1Q8N128 213 aaPredicted RBP20.12■□□□□ 0.81
LSP1-201ENST00000311604 FSIP1Q8NA03 581 aa20.12■□□□□ 0.81
LSP1-201ENST00000311604 ACER1Q8TDN7 264 aa20.12■□□□□ 0.81
LSP1-201ENST00000311604 ZMYND12Q9H0C1 365 aa20.12■□□□□ 0.81
LSP1-201ENST00000311604 CLSTN2Q9H4D0 955 aa20.12■□□□□ 0.81
LSP1-201ENST00000311604 DDX19AQ9NUU7 478 aaKnown RBP20.12■□□□□ 0.81
LSP1-201ENST00000311604 MRVI1Q9Y6F6 885 aa20.12■□□□□ 0.81
LSP1-201ENST00000311604 MORC2Q9Y6X9 1032 aaPredicted RBP20.12■□□□□ 0.81
LSP1-201ENST00000311604 F5H6K3 240 aa20.11■□□□□ 0.81
LSP1-201ENST00000311604 CALML3P27482 149 aa20.11■□□□□ 0.81
LSP1-201ENST00000311604 CAP2P40123 477 aa20.11■□□□□ 0.81
LSP1-201ENST00000311604 ECE1P42892 770 aa20.11■□□□□ 0.81
LSP1-201ENST00000311604 KLRC3Q07444 240 aa20.11■□□□□ 0.81
LSP1-201ENST00000311604 FMR1NBQ8N0W7 255 aaPredicted RBP20.11■□□□□ 0.81
LSP1-201ENST00000311604 ZNF526Q8TF50 670 aaPredicted RBP20.11■□□□□ 0.81
LSP1-201ENST00000311604 RBSNQ9H1K0 784 aa20.11■□□□□ 0.81
LSP1-201ENST00000311604 GRPEL1Q9HAV7 217 aa20.11■□□□□ 0.81
LSP1-201ENST00000311604 ADARB2Q9NS39 739 aaKnown RBP20.11■□□□□ 0.81
LSP1-201ENST00000311604 FBXO2Q9UK22 296 aaPredicted RBP20.11■□□□□ 0.81
LSP1-201ENST00000311604 GRIN1Q05586 938 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 CCDC96Q2M329 555 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 SHC4Q6S5L8 630 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 MRPS27Q92552 414 aaKnown RBP20.1■□□□□ 0.81
LSP1-201ENST00000311604 GMCL1Q96IK5 515 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 CLIC6Q96NY7 704 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 NUP88Q99567 741 aaPredicted RBP20.1■□□□□ 0.81
LSP1-201ENST00000311604 BRMS1Q9HCU9 246 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 SYNPO2Q9UMS6 1093 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 PCDHA6Q9UN73 950 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 PCDHA8Q9Y5H6 950 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 SMCHD1A6NHR9 2005 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 FAM237AA0A1B0GTK4 181 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 A0A1B0GVL5 298 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 USP17L10C9JJH3 530 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 EPHX2P34913 555 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 TNNI2P48788 182 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 PIK3AP1Q6ZUJ8 805 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 CCDC148Q8NFR7 591 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 NUP62CLQ9H1M0 184 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 RRAGCQ9HB90 399 aa20.1■□□□□ 0.81
LSP1-201ENST00000311604 ESYT2A0FGR8 921 aa20.09■□□□□ 0.81
LSP1-201ENST00000311604 PTPREP23469 700 aa20.09■□□□□ 0.81
LSP1-201ENST00000311604 CMA1P23946 247 aa20.09■□□□□ 0.81
LSP1-201ENST00000311604 NDUFA8P51970 172 aa20.09■□□□□ 0.81
LSP1-201ENST00000311604 FAM160A1Q05DH4 1040 aa20.09■□□□□ 0.81
LSP1-201ENST00000311604 TNFAIP1Q13829 316 aa20.09■□□□□ 0.81
LSP1-201ENST00000311604 GALNT17Q6IS24 598 aa20.09■□□□□ 0.81
LSP1-201ENST00000311604 GLIS2Q9BZE0 524 aaPredicted RBP20.09■□□□□ 0.81
LSP1-201ENST00000311604 DEFB129Q9H1M3 183 aa20.09■□□□□ 0.81
LSP1-201ENST00000311604 HPSEQ9Y251 543 aa20.09■□□□□ 0.81
LSP1-201ENST00000311604 TMX2Q9Y320 296 aa20.09■□□□□ 0.81
LSP1-201ENST00000311604 ATP2B1P20020 1258 aa20.08■□□□□ 0.81
LSP1-201ENST00000311604 SLC1A4P43007 532 aa20.08■□□□□ 0.81
LSP1-201ENST00000311604 NAPAP54920 295 aa20.08■□□□□ 0.81
LSP1-201ENST00000311604 CAMK4Q16566 473 aa20.08■□□□□ 0.81
LSP1-201ENST00000311604 CCDC84Q86UT8 332 aaPredicted RBP20.08■□□□□ 0.81
LSP1-201ENST00000311604 COA7Q96BR5 231 aa20.08■□□□□ 0.81
LSP1-201ENST00000311604 TAF1DQ9H5J8 278 aaPredicted RBP20.08■□□□□ 0.81
LSP1-201ENST00000311604 DOCK1Q14185 1865 aa20.08■□□□□ 0.8
LSP1-201ENST00000311604 SSC5DA1L4H1 1573 aa20.08■□□□□ 0.8
LSP1-201ENST00000311604 PNMA6FA0A0J9YX94 578 aa20.07■□□□□ 0.8
LSP1-201ENST00000311604 TRIM75PA6NK02 468 aa20.07■□□□□ 0.8
LSP1-201ENST00000311604 MRE11P49959 708 aa20.07■□□□□ 0.8
LSP1-201ENST00000311604 NBPF12Q5TAG4 269 aaPredicted RBP20.07■□□□□ 0.8
LSP1-201ENST00000311604 RESP18Q5W5W9 173 aa20.07■□□□□ 0.8
LSP1-201ENST00000311604 PANK2Q9BZ23 570 aa20.07■□□□□ 0.8
LSP1-201ENST00000311604 SEC63Q9UGP8 760 aaKnown RBP20.07■□□□□ 0.8
LSP1-201ENST00000311604 IQCA1LA6NCM1 817 aa20.07■□□□□ 0.8
LSP1-201ENST00000311604 hCG_1984214I3L0E3 225 aa20.07■□□□□ 0.8
LSP1-201ENST00000311604 CUTAO60888 179 aa20.07■□□□□ 0.8
LSP1-201ENST00000311604 TRAPPC10P48553 1259 aa20.07■□□□□ 0.8
LSP1-201ENST00000311604 TTC38Q5R3I4 469 aa20.07■□□□□ 0.8
LSP1-201ENST00000311604 ANGEL2Q5VTE6 544 aaKnown RBP20.07■□□□□ 0.8
LSP1-201ENST00000311604 BTNL9Q6UXG8 535 aa20.07■□□□□ 0.8
LSP1-201ENST00000311604 ZNF713Q8N859 430 aaPredicted RBP20.07■□□□□ 0.8
LSP1-201ENST00000311604 SMCO2A6NFE2 343 aa20.06■□□□□ 0.8
LSP1-201ENST00000311604 ZBTB5O15062 677 aa20.06■□□□□ 0.8
LSP1-201ENST00000311604 EDIL3O43854 480 aa20.06■□□□□ 0.8
LSP1-201ENST00000311604 LETM1O95202 739 aaPredicted RBP20.06■□□□□ 0.8
LSP1-201ENST00000311604 PFKFB1P16118 471 aa20.06■□□□□ 0.8
LSP1-201ENST00000311604 EAPPQ56P03 285 aaPredicted RBP20.06■□□□□ 0.8
LSP1-201ENST00000311604 L1TD1Q5T7N2 865 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms