RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SLC16A2P36021 539 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 ATL3Q6DD88 541 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 IL17RAQ96F46 866 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.2□□□□□ -0.14
RETREG3-201ENST00000309428 GOLGA6CA6NDK9 693 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 SRGAP2O75044 1071 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 GOLGA6DP0CG33 693 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 PAFAH1B1P43034 410 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 AMIGO3Q86WK7 504 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 GOLGA6AQ9NYA3 693 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 LCMT1Q9UIC8 334 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 SYNRGQ9UMZ2 1314 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 CCNT1O60563 726 aaKnown RBP14.19□□□□□ -0.14
RETREG3-201ENST00000309428 BMP6P22004 513 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 CUL4BQ13620 913 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 CACNA2D4Q7Z3S7 1137 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 SRGAP1Q7Z6B7 1085 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 VSTM4Q8IW00 320 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 OTUD6BQ8N6M0 293 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 AGXT2Q9BYV1 514 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 OSBPL5Q9H0X9 879 aaPredicted RBP14.19□□□□□ -0.14
RETREG3-201ENST00000309428 KANSL2Q9H9L4 492 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 LUC7L2Q9Y383 392 aaKnown RBP14.19□□□□□ -0.14
RETREG3-201ENST00000309428 CHD2O14647 1828 aaKnown RBP14.19□□□□□ -0.14
RETREG3-201ENST00000309428 A0A087X0B3 334 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 USP8P40818 1118 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 ASIC1P78348 528 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 PTPAQ15257 358 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 MMRN2Q9H8L6 949 aa14.19□□□□□ -0.14
RETREG3-201ENST00000309428 HGSO14964 777 aaPredicted RBP14.18□□□□□ -0.14
RETREG3-201ENST00000309428 MFSD14BQ5SR56 506 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 TMTC2Q8N394 836 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 BCAS4Q8TDM0 211 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 DCP1AQ9NPI6 582 aaPredicted RBP14.18□□□□□ -0.14
RETREG3-201ENST00000309428 ERVV-1B6SEH8 477 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 TECP42680 631 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 ARHGEF1Q92888 912 aaKnown RBP14.18□□□□□ -0.14
RETREG3-201ENST00000309428 COA7Q96BR5 231 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 PHLPP2Q6ZVD8 1323 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 CDHR2Q9BYE9 1310 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 AFDNP55196 1824 aaKnown RBP14.18□□□□□ -0.14
RETREG3-201ENST00000309428 PLCD1P51178 756 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 CASP8Q14790 479 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 CT47A1Q5JQC4 288 aaPredicted RBP14.18□□□□□ -0.14
RETREG3-201ENST00000309428 TRAPPC3LQ5T215 181 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 RESP18Q5W5W9 173 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 CDC23Q9UJX2 597 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 JRKLQ9Y4A0 524 aa14.18□□□□□ -0.14
RETREG3-201ENST00000309428 JCADQ9P266 1359 aa14.17□□□□□ -0.14
RETREG3-201ENST00000309428 C5P01031 1676 aa14.17□□□□□ -0.14
RETREG3-201ENST00000309428 RNF40O75150 1001 aa14.17□□□□□ -0.14
RETREG3-201ENST00000309428 CNGA4Q8IV77 575 aa14.17□□□□□ -0.14
RETREG3-201ENST00000309428 USP21Q9UK80 565 aa14.17□□□□□ -0.14
RETREG3-201ENST00000309428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.17□□□□□ -0.14
RETREG3-201ENST00000309428 STX10O60499 249 aa14.17□□□□□ -0.14
RETREG3-201ENST00000309428 FGFR2P21802 821 aa14.17□□□□□ -0.14
RETREG3-201ENST00000309428 LIFRP42702 1097 aa14.17□□□□□ -0.14
RETREG3-201ENST00000309428 BRD3Q15059 726 aa14.17□□□□□ -0.14
RETREG3-201ENST00000309428 SCLT1Q96NL6 688 aa14.17□□□□□ -0.14
RETREG3-201ENST00000309428 SEC63Q9UGP8 760 aaKnown RBP14.17□□□□□ -0.14
RETREG3-201ENST00000309428 NCAPHQ15003 741 aa14.17□□□□□ -0.14
RETREG3-201ENST00000309428 ZYXQ15942 572 aaKnown RBP14.17□□□□□ -0.14
RETREG3-201ENST00000309428 GOLGA6L7A0A1B0GV03 622 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 SMIM23A6NLE4 172 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 ERLIN2O94905 339 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 CXCR5P32302 372 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 MLKLQ8NB16 471 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.16□□□□□ -0.14
RETREG3-201ENST00000309428 PLA2G12BQ9BX93 195 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.16□□□□□ -0.142e-6■■■■■ 88.7
RETREG3-201ENST00000309428 HDAC6Q9UBN7 1215 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 FBXO2Q9UK22 296 aaPredicted RBP14.16□□□□□ -0.14
RETREG3-201ENST00000309428 CCDC151A5D8V7 595 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 GOLGA6BA6NDN3 693 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 SASH3O75995 380 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 KRT18P05783 430 aaKnown RBP14.16□□□□□ -0.14
RETREG3-201ENST00000309428 SCG2P13521 617 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 TAL1P17542 331 aaPredicted RBP14.16□□□□□ -0.14
RETREG3-201ENST00000309428 SPTY2D1Q68D10 685 aaPredicted RBP14.16□□□□□ -0.14
RETREG3-201ENST00000309428 STAG1Q8WVM7 1258 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 PPM1EQ8WY54 764 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 FBXO3Q9UK99 471 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 LRRC37A3O60309 1634 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 CD44P16070 742 aaKnown RBP14.16□□□□□ -0.14
RETREG3-201ENST00000309428 INPP5BP32019 993 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 BTDP43251 543 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 KIF5AQ12840 1032 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 LRRC41Q15345 812 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 CCDC42Q96M95 316 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 MAP3K14Q99558 947 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 MRPL44Q9H9J2 332 aaKnown RBP14.16□□□□□ -0.14
RETREG3-201ENST00000309428 PARP3Q9Y6F1 533 aa14.16□□□□□ -0.14
RETREG3-201ENST00000309428 EIF3CLB5ME19 914 aaKnown RBP14.15□□□□□ -0.14
RETREG3-201ENST00000309428 HSF2BPO75031 334 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 TBC1D8O95759 1140 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 PTPREP23469 700 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 IQCEQ6IPM2 695 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 DTHD1Q6ZMT9 781 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 RBM43Q6ZSC3 357 aaKnown RBP14.15□□□□□ -0.14
RETREG3-201ENST00000309428 NELFBQ8WX92 580 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms