RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 CCDC84Q86UT8 332 aaPredicted RBP9.61□□□□□ -0.87
CHD6-201ENST00000309279 NKX2-3Q8TAU0 364 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 ESR2Q92731 530 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 ZIC5Q96T25 663 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 KRT23Q9C075 422 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 CNNM2Q9H8M5 875 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 IL17RBQ9NRM6 502 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 TCP11L1Q9NUJ3 509 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 TAF6LQ9Y6J9 622 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 NEDD4P46934 1319 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 A0A0G2JLL6 359 aaPredicted RBP9.6□□□□□ -0.87
CHD6-201ENST00000309279 TSPY2A6NKD2 308 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 C19orf81C9J6K1 198 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 USP17L10C9JJH3 530 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 E7EWF7 191 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 RANBP6O60518 1105 aaKnown RBP9.6□□□□□ -0.87
CHD6-201ENST00000309279 AOC2O75106 756 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 KIF23Q02241 960 aaPredicted RBP9.6□□□□□ -0.87
CHD6-201ENST00000309279 SNAPC2Q13487 334 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 MOGSQ13724 837 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 SH3D19Q5HYK7 790 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 FAM47AQ5JRC9 791 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 RNF20Q5VTR2 975 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 STOX1Q6ZVD7 989 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 PRRT2Q7Z6L0 340 aaPredicted RBP9.6□□□□□ -0.87
CHD6-201ENST00000309279 INO80BQ9C086 356 aaPredicted RBP9.6□□□□□ -0.87
CHD6-201ENST00000309279 MTMR4Q9NYA4 1195 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 NYAP2Q9P242 653 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 SYNPO2Q9UMS6 1093 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 MYH4Q9Y623 1939 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 A0A1W2PRG0 241 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 TRIM75PA6NK02 468 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 SEC24BO95487 1268 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 CETPP11597 493 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 RFX1P22670 979 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 ICA1Q05084 483 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 TRDNQ13061 729 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 GRM1Q13255 1194 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 RRP12Q5JTH9 1297 aaKnown RBP9.6□□□□□ -0.87
CHD6-201ENST00000309279 PPP4R3BQ5MIZ7 849 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 ANKRD23Q86SG2 305 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 RASEFQ8IZ41 740 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 JMYQ8N9B5 988 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 NCOA7Q8NI08 942 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 ACER1Q8TDN7 264 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 CEP95Q96GE4 821 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 PTPN18Q99952 460 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 KIAA1683Q9H0B3 1180 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 PIF1Q9H611 641 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 TOMM22Q9NS69 142 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 ZSWIM5Q9P217 1185 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 TMX2Q9Y320 296 aa9.6□□□□□ -0.87
CHD6-201ENST00000309279 LOC285556D6RIA3 1793 aa9.59□□□□□ -0.87
CHD6-201ENST00000309279 B4E1Z4 1266 aa9.59□□□□□ -0.87
CHD6-201ENST00000309279 TTLL1O95922 423 aa9.59□□□□□ -0.87
CHD6-201ENST00000309279 EEF2P13639 858 aaKnown RBP9.59□□□□□ -0.87
CHD6-201ENST00000309279 ZKSCAN1P17029 563 aaPredicted RBP9.59□□□□□ -0.87
CHD6-201ENST00000309279 SREBF2Q12772 1141 aa9.59□□□□□ -0.87
CHD6-201ENST00000309279 MTA1Q13330 715 aa9.59□□□□□ -0.87
CHD6-201ENST00000309279 FASTKD5Q7L8L6 764 aaKnown RBP9.59□□□□□ -0.87
CHD6-201ENST00000309279 CLEC10AQ8IUN9 316 aa9.59□□□□□ -0.87
CHD6-201ENST00000309279 C1orf131Q8NDD1 294 aaKnown RBP9.59□□□□□ -0.87
CHD6-201ENST00000309279 BRI3BPQ8WY22 251 aa9.59□□□□□ -0.87
CHD6-201ENST00000309279 C12orf42Q96LP6 360 aa9.59□□□□□ -0.87
CHD6-201ENST00000309279 TTC14Q96N46 770 aa9.59□□□□□ -0.87
CHD6-201ENST00000309279 PRDM4Q9UKN5 801 aa9.59□□□□□ -0.87
CHD6-201ENST00000309279 G3BP2Q9UN86 482 aaKnown RBP9.59□□□□□ -0.87
CHD6-201ENST00000309279 CCL15-CCL14A0A0B4J2E2 113 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 POM121CA8CG34 1229 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 NMT2O60551 498 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 USP14P54578 494 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 MTMR2Q13614 643 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 KRT32Q14532 448 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 CCL15Q16663 113 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 CCDC178Q5BJE1 867 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 RCSD1Q6JBY9 416 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 IQCA1Q86XH1 822 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 DGKHQ86XP1 1220 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 IFNL1Q8IU54 200 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 MB21D2Q8IYB1 491 aaPredicted RBP9.58□□□□□ -0.88
CHD6-201ENST00000309279 PROCA1Q8NCQ7 364 aaPredicted RBP9.58□□□□□ -0.88
CHD6-201ENST00000309279 ANKS1AQ92625 1134 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 IL17RAQ96F46 866 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 SH2D4AQ9H788 454 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 ZCCHC17Q9NP64 241 aaKnown RBP9.58□□□□□ -0.88
CHD6-201ENST00000309279 EMILIN3Q9NT22 766 aa9.58□□□□□ -0.88
CHD6-201ENST00000309279 BTBD19C9JJ37 291 aa9.57□□□□□ -0.88
CHD6-201ENST00000309279 IGF2BP3O00425 579 aaKnown RBP eCLIP9.57□□□□□ -0.88
CHD6-201ENST00000309279 FAM200BP0CF97 657 aa9.57□□□□□ -0.88
CHD6-201ENST00000309279 ERCC5P28715 1186 aaPredicted RBP9.57□□□□□ -0.88
CHD6-201ENST00000309279 HOXD11P31277 338 aaPredicted RBP9.57□□□□□ -0.88
CHD6-201ENST00000309279 HMGCS2P54868 508 aa9.57□□□□□ -0.88
CHD6-201ENST00000309279 MAP2K1Q02750 393 aaPredicted RBP9.57□□□□□ -0.88
CHD6-201ENST00000309279 ADCK5Q3MIX3 580 aa9.57□□□□□ -0.88
CHD6-201ENST00000309279 GPAT2Q6NUI2 795 aa9.57□□□□□ -0.88
CHD6-201ENST00000309279 USP17L2Q6R6M4 530 aa9.57□□□□□ -0.88
CHD6-201ENST00000309279 CYB5R4Q7L1T6 521 aa9.57□□□□□ -0.88
CHD6-201ENST00000309279 RALYLQ86SE5 291 aaKnown RBP9.57□□□□□ -0.88
CHD6-201ENST00000309279 ZSCAN10Q96SZ4 725 aaPredicted RBP9.57□□□□□ -0.88
CHD6-201ENST00000309279 PAGR1Q9BTK6 254 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms