RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 CASP8Q14790 479 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 Q4G0T1 1027 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 RUFY4Q6ZNE9 571 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 CENPKQ9BS16 269 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 TNS3Q68CZ2 1445 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 B4DLN1 442 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 FLOT1O75955 427 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 MRPL12P52815 198 aaKnown RBP16.86■□□□□ 0.29
LEMD3-201ENST00000308330 ARHGEF2Q92974 986 aaKnown RBP16.86■□□□□ 0.29
LEMD3-201ENST00000308330 RRP36Q96EU6 259 aaKnown RBP16.86■□□□□ 0.29
LEMD3-201ENST00000308330 KDRP35968 1356 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 SKIP12755 728 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 HEG1Q9ULI3 1381 aa16.86■□□□□ 0.29
LEMD3-201ENST00000308330 SHROOM2Q13796 1616 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 KCNQ2O43526 872 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 TMED10P49755 219 aaKnown RBP16.85■□□□□ 0.29
LEMD3-201ENST00000308330 TGFBRAP1Q8WUH2 860 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 EDC3Q96F86 508 aaKnown RBP16.85■□□□□ 0.29
LEMD3-201ENST00000308330 HOOK2Q96ED9 719 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 SEPT11Q9NVA2 429 aaKnown RBP16.85■□□□□ 0.29
LEMD3-201ENST00000308330 USP40Q9NVE5 1235 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 PHLPP2Q6ZVD8 1323 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 ZNF532Q9HCE3 1301 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 SETD1BQ9UPS6 1966 aaKnown RBP16.85■□□□□ 0.29
LEMD3-201ENST00000308330 PTPRMP28827 1452 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 KCNA4P22459 653 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 ALDH3A1P30838 453 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 CCDC26Q8TAB7 109 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 PPP1R13BQ96KQ4 1090 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 FAM227BQ96M60 508 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 C6orf50Q9HD87 102 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 SCNN1DP51172 638 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 ZNF653Q96CK0 615 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 EXOC1Q9NV70 894 aa16.85■□□□□ 0.29
LEMD3-201ENST00000308330 E2F6O75461 281 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 RPS6KA4O75676 772 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 MFN1Q8IWA4 741 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 SSH3Q8TE77 659 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 SREK1Q8WXA9 508 aaKnown RBP16.84■□□□□ 0.29
LEMD3-201ENST00000308330 TMOD4Q9NZQ9 345 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 STXBP3O00186 592 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 GNAT1P11488 350 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 CUL4BQ13620 913 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 ERFEQ4G0M1 354 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 EAF2Q96CJ1 260 aaPredicted RBP16.84■□□□□ 0.29
LEMD3-201ENST00000308330 SMC6Q96SB8 1091 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 BEGAINQ9BUH8 593 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 GPCPD1Q9NPB8 672 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 GUCA1BQ9UMX6 200 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 RNF17Q9BXT8 1623 aaKnown RBP16.84■□□□□ 0.29
LEMD3-201ENST00000308330 IRF6O14896 467 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 SPATA17Q96L03 361 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 ARHGEF10LQ9HCE6 1279 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 SEC31BQ9NQW1 1179 aa16.84■□□□□ 0.29
LEMD3-201ENST00000308330 PLEKHG2Q9H7P9 1386 aa16.83■□□□□ 0.29
LEMD3-201ENST00000308330 C1orf167Q5SNV9 1468 aa16.83■□□□□ 0.29
LEMD3-201ENST00000308330 KLHL33A6NCF5 533 aa16.83■□□□□ 0.29
LEMD3-201ENST00000308330 BBOX1O75936 387 aa16.83■□□□□ 0.29
LEMD3-201ENST00000308330 CCDC102BQ68D86 513 aa16.83■□□□□ 0.29
LEMD3-201ENST00000308330 SRGAP1Q7Z6B7 1085 aa16.83■□□□□ 0.29
LEMD3-201ENST00000308330 NLRP10Q86W26 655 aa16.83■□□□□ 0.29
LEMD3-201ENST00000308330 CEP70Q8NHQ1 597 aa16.83■□□□□ 0.29
LEMD3-201ENST00000308330 ZNF804BA4D1E1 1349 aa16.83■□□□□ 0.29
LEMD3-201ENST00000308330 ZBTB7AO95365 584 aa16.83■□□□□ 0.28
LEMD3-201ENST00000308330 GSDMBQ8TAX9 411 aa16.83■□□□□ 0.28
LEMD3-201ENST00000308330 FAM81AQ8TBF8 368 aa16.83■□□□□ 0.28
LEMD3-201ENST00000308330 ATP6V0A1Q93050 837 aa16.83■□□□□ 0.28
LEMD3-201ENST00000308330 THEGQ9P2T0 379 aa16.83■□□□□ 0.28
LEMD3-201ENST00000308330 ALKQ9UM73 1620 aa16.83■□□□□ 0.28
LEMD3-201ENST00000308330 TXNDC9O14530 226 aa16.83■□□□□ 0.28
LEMD3-201ENST00000308330 PDE8BO95263 885 aa16.83■□□□□ 0.28
LEMD3-201ENST00000308330 TNFAIP1Q13829 316 aa16.83■□□□□ 0.28
LEMD3-201ENST00000308330 MTRQ99707 1265 aa16.83■□□□□ 0.28
LEMD3-201ENST00000308330 PUS3Q9BZE2 481 aaKnown RBP16.83■□□□□ 0.28
LEMD3-201ENST00000308330 ITGB1BP2Q9UKP3 347 aa16.83■□□□□ 0.28
LEMD3-201ENST00000308330 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.82■□□□□ 0.28
LEMD3-201ENST00000308330 PDHA1P08559 390 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 ICA1Q05084 483 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 ZNF280CQ8ND82 737 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 ARIH1Q9Y4X5 557 aaPredicted RBP16.82■□□□□ 0.28
LEMD3-201ENST00000308330 RTL9Q8NET4 1388 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 MYBL2P10244 700 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 CALML3P27482 149 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 ZBTB16Q05516 673 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 SEPT2Q15019 361 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 KIRREL3Q8IZU9 778 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 ERMNQ8TAM6 284 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 AMPD3Q01432 767 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 KBTBD12Q3ZCT8 623 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 USP33Q8TEY7 942 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.82■□□□□ 0.28
LEMD3-201ENST00000308330 BLMP54132 1417 aaPredicted RBP16.82■□□□□ 0.28
LEMD3-201ENST00000308330 EIF4E1BA6NMX2 242 aaKnown RBP16.82■□□□□ 0.28
LEMD3-201ENST00000308330 ERVV-1B6SEH8 477 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 MEFVO15553 781 aaPredicted RBP16.82■□□□□ 0.28
LEMD3-201ENST00000308330 KRT86O43790 486 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 SF3A3Q12874 501 aaKnown RBP eCLIP16.82■□□□□ 0.28
LEMD3-201ENST00000308330 TMEM87AQ8NBN3 555 aa16.82■□□□□ 0.28
LEMD3-201ENST00000308330 CIB2O75838 187 aa16.81■□□□□ 0.28
LEMD3-201ENST00000308330 TMCC1O94876 653 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms