RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 GOLGA6CA6NDK9 693 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 GOLGA6BA6NDN3 693 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 WDR46O15213 610 aaKnown RBP9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 KRT86O43790 486 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 CUTAO60888 179 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 GOLGA6DP0CG33 693 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 CYP19A1P11511 503 aaPredicted RBP9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 LIN9Q5TKA1 542 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 PPFIBP2Q8ND30 876 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 GOLGA6AQ9NYA3 693 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 USP17L12C9JPN9 530 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 USP17L21D6R901 530 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 ERCC5P28715 1186 aaPredicted RBP9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 TAOK1Q7L7X3 1001 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 PSTPIP2Q9H939 334 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 MYH13Q9UKX3 1938 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 ECE1P42892 770 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 SETDB1Q15047 1291 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 TEX2Q8IWB9 1127 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 TPCN1Q9ULQ1 816 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 TNS2Q63HR2 1409 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 XRCC6P12956 609 aaKnown RBP eCLIP9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 ORC2Q13416 577 aaPredicted RBP9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 PPP1R2P3Q6NXS1 205 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 KCNV1Q6PIU1 500 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 PNMA1Q8ND90 353 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 TSGA10Q9BZW7 698 aa9.22□□□□□ -0.93
PCDHB1-201ENST00000306549 MCM7P33993 719 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 AK8Q96MA6 479 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 OSBPL3Q9H4L5 887 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 MST1RQ04912 1400 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 TTC36A6NLP5 189 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 BIN1O00499 593 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 SASH1O94885 1247 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 ZNF165P49910 485 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 ITIH3Q06033 890 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 TFDP1Q14186 410 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 ZSCAN30Q86W11 494 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 WDR11Q9BZH6 1224 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 MLXIPQ9HAP2 919 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 NRBP2Q9NSY0 501 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 ZBTB21Q9ULJ3 1066 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 KIF3CO14782 793 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 FAM200AQ8TCP9 573 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 ZNRF3Q9ULT6 936 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 PCDHB13Q9Y5F0 798 aa9.21□□□□□ -0.93
PCDHB1-201ENST00000306549 N4BP1O75113 896 aaKnown RBP9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 CIB2O75838 187 aa9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 STRIP1Q5VSL9 837 aa9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 CPXCR1Q8N123 301 aa9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 CCPG1Q9ULG6 757 aa9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 SETD1AO15047 1707 aaKnown RBP9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 IGHDP01880 384 aa9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 GYG1P46976 350 aa9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 ADGRB1O14514 1584 aa9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 PFDN6O15212 129 aa9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 MYL1P05976 194 aa9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 UBASH3AP57075 661 aa9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 ZNF654Q8IZM8 581 aa9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 GLG1Q92896 1179 aa9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 ABCC6O95255 1503 aa9.21□□□□□ -0.94
PCDHB1-201ENST00000306549 KRT5P13647 590 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 GNG11P61952 73 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 LETM2Q2VYF4 491 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 NSMFQ6X4W1 530 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 PANK2Q9BZ23 570 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 USH1CQ9Y6N9 552 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 CTAGE15A4D2H0 777 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 F13A1P00488 732 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 CTAGE8P0CG41 777 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 NKX1-1Q15270 411 aaPredicted RBP9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 CTAGE6Q86UF2 777 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 CTAGE4Q8IX94 777 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 BCAMP50895 628 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 SREBF2Q12772 1141 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 USP26Q9BXU7 913 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 PNMA6EA0A0J9YXQ4 647 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 ECM2O94769 699 aaPredicted RBP9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 HDLBPQ00341 1268 aaKnown RBP9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 TSHZ3Q63HK5 1081 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 RNF26Q9BY78 433 aaPredicted RBP9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 HOXC6P09630 235 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 ATP6V1E1P36543 226 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 SP4Q02446 784 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 KLHL40Q2TBA0 621 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 SLFN13Q68D06 897 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 CCDC84Q86UT8 332 aaPredicted RBP9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 DCAF4Q8WV16 495 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 NUP58Q9BVL2 599 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 CFBP00751 764 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 BCRP11274 1271 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 MYCLP12524 364 aaPredicted RBP9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 AFMP43652 599 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 AK2P54819 239 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 DOK7Q18PE1 504 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 FCHSD1Q86WN1 690 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 JAG2Q9Y219 1238 aa9.2□□□□□ -0.94
PCDHB1-201ENST00000306549 PAXBP1Q9Y5B6 917 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms