RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 KIAA1468Q9P260 1216 aa21.09■□□□□ 0.97
BPTF-201ENST00000306378 HGSO14964 777 aaPredicted RBP21.09■□□□□ 0.97
BPTF-201ENST00000306378 AP1B1Q10567 949 aa21.09■□□□□ 0.97
BPTF-201ENST00000306378 DCTPP1Q9H773 170 aa21.09■□□□□ 0.97
BPTF-201ENST00000306378 TRIM33Q9UPN9 1127 aa21.09■□□□□ 0.97
BPTF-201ENST00000306378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.09■□□□□ 0.97
BPTF-201ENST00000306378 NXNQ6DKJ4 435 aa21.09■□□□□ 0.97
BPTF-201ENST00000306378 PARP9Q8IXQ6 854 aa21.09■□□□□ 0.97
BPTF-201ENST00000306378 ANKRD42Q8N9B4 389 aa21.09■□□□□ 0.97
BPTF-201ENST00000306378 KCNJ18B7U540 433 aa21.08■□□□□ 0.97
BPTF-201ENST00000306378 KCNJ12Q14500 433 aa21.08■□□□□ 0.97
BPTF-201ENST00000306378 RNF207Q6ZRF8 634 aa21.08■□□□□ 0.97
BPTF-201ENST00000306378 ARHGAP31Q2M1Z3 1444 aa21.08■□□□□ 0.97
BPTF-201ENST00000306378 TERB1Q8NA31 727 aa21.08■□□□□ 0.97
BPTF-201ENST00000306378 DNAJC17Q9NVM6 304 aaKnown RBP21.08■□□□□ 0.97
BPTF-201ENST00000306378 STX8Q9UNK0 236 aa21.08■□□□□ 0.97
BPTF-201ENST00000306378 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.08■□□□□ 0.97
BPTF-201ENST00000306378 C4BPBP20851 252 aa21.08■□□□□ 0.97
BPTF-201ENST00000306378 TRPC1P48995 793 aa21.08■□□□□ 0.97
BPTF-201ENST00000306378 CDR2Q01850 454 aa21.08■□□□□ 0.97
BPTF-201ENST00000306378 CABP5Q9NP86 173 aa21.08■□□□□ 0.97
BPTF-201ENST00000306378 XRCC5P13010 732 aaKnown RBP21.08■□□□□ 0.97
BPTF-201ENST00000306378 IQCA1LA6NCM1 817 aa21.08■□□□□ 0.96
BPTF-201ENST00000306378 CYLC2Q14093 348 aaPredicted RBP21.08■□□□□ 0.96
BPTF-201ENST00000306378 TMCO4Q5TGY1 634 aa21.08■□□□□ 0.96
BPTF-201ENST00000306378 SPINK5Q9NQ38 1064 aaPredicted RBP21.08■□□□□ 0.96
BPTF-201ENST00000306378 HELLSQ9NRZ9 838 aa21.08■□□□□ 0.96
BPTF-201ENST00000306378 RGS12O14924 1447 aa21.08■□□□□ 0.96
BPTF-201ENST00000306378 TRIM55Q9BYV6 548 aa21.08■□□□□ 0.96
BPTF-201ENST00000306378 SLF1Q9BQI6 1058 aa21.07■□□□□ 0.96
BPTF-201ENST00000306378 C17orf53Q8N3J3 647 aaPredicted RBP21.07■□□□□ 0.96
BPTF-201ENST00000306378 VTI1AQ96AJ9 217 aa21.07■□□□□ 0.96
BPTF-201ENST00000306378 REREQ9P2R6 1566 aa21.07■□□□□ 0.96
BPTF-201ENST00000306378 ANO5Q75V66 913 aa21.07■□□□□ 0.96
BPTF-201ENST00000306378 MOV10L1Q9BXT6 1211 aaKnown RBP21.07■□□□□ 0.96
BPTF-201ENST00000306378 NT5C3AQ9H0P0 336 aa21.07■□□□□ 0.96
BPTF-201ENST00000306378 SNX1Q13596 522 aa21.07■□□□□ 0.96
BPTF-201ENST00000306378 FNBP1Q96RU3 617 aa21.07■□□□□ 0.96
BPTF-201ENST00000306378 INHBAP08476 426 aa21.07■□□□□ 0.96
BPTF-201ENST00000306378 SH3GL2Q99962 352 aa21.07■□□□□ 0.96
BPTF-201ENST00000306378 CABP1Q9NZU7 370 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 IL15P40933 162 aaPredicted RBP21.06■□□□□ 0.96
BPTF-201ENST00000306378 SLC17A8Q8NDX2 589 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 FAM81BQ96LP2 452 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 SLC44A4Q53GD3 710 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 CACTINQ8WUQ7 758 aaKnown RBP21.06■□□□□ 0.96
BPTF-201ENST00000306378 ANGEL1Q9UNK9 670 aaKnown RBP21.06■□□□□ 0.96
BPTF-201ENST00000306378 PGRMC1O00264 195 aaKnown RBP21.06■□□□□ 0.96
BPTF-201ENST00000306378 GID8Q9NWU2 228 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 KIF24Q5T7B8 1368 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 RAD54L2Q9Y4B4 1467 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 LCMT1Q9UIC8 334 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 DKC1O60832 514 aaKnown RBP eCLIP21.06■□□□□ 0.96
BPTF-201ENST00000306378 ADALQ6DHV7 355 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 OR9Q1Q8NGQ5 310 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 FMO2Q99518 471 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 CXorf56Q9H5V9 222 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 KCNK3O14649 394 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 STAT1P42224 750 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 TTLL7Q6ZT98 887 aa21.06■□□□□ 0.96
BPTF-201ENST00000306378 SYCE1LA8MT33 242 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 DAB1O75553 588 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 MRPS35P82673 323 aaKnown RBP21.05■□□□□ 0.96
BPTF-201ENST00000306378 FLOT2Q14254 428 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 PBKQ96KB5 322 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 RAB44Q7Z6P3 723 aaPredicted RBP21.05■□□□□ 0.96
BPTF-201ENST00000306378 TRIM56Q9BRZ2 755 aaKnown RBP21.05■□□□□ 0.96
BPTF-201ENST00000306378 GUCY2DQ02846 1103 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 GNPTABQ3T906 1256 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 ING2Q9H160 280 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 NSFP46459 744 aaKnown RBP21.05■□□□□ 0.96
BPTF-201ENST00000306378 ARHGAP44Q17R89 818 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 BASP1P80723 227 aaKnown RBP21.05■□□□□ 0.96
BPTF-201ENST00000306378 KRT39Q6A163 491 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 LRRC37BQ96QE4 947 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 HNRNPRO43390 633 aaKnown RBP21.05■□□□□ 0.96
BPTF-201ENST00000306378 HAND2P61296 217 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 GJC2Q5T442 439 aaPredicted RBP21.05■□□□□ 0.96
BPTF-201ENST00000306378 DDX54Q8TDD1 881 aaKnown RBP21.05■□□□□ 0.96
BPTF-201ENST00000306378 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.05■□□□□ 0.96
BPTF-201ENST00000306378 CCDC8Q9H0W5 538 aaPredicted RBP21.05■□□□□ 0.96
BPTF-201ENST00000306378 HNRNPCL2B2RXH8 293 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 EEF1GP26641 437 aaKnown RBP21.05■□□□□ 0.96
BPTF-201ENST00000306378 CFAP70Q5T0N1 1121 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 OSBPL1AQ9BXW6 950 aa21.05■□□□□ 0.96
BPTF-201ENST00000306378 RINT1Q6NUQ1 792 aa21.04■□□□□ 0.96
BPTF-201ENST00000306378 PLEKHM2Q8IWE5 1019 aa21.04■□□□□ 0.96
BPTF-201ENST00000306378 ACTN1P12814 892 aa21.04■□□□□ 0.96
BPTF-201ENST00000306378 CLCN6P51797 869 aa21.04■□□□□ 0.96
BPTF-201ENST00000306378 GIPC2Q8TF65 315 aa21.04■□□□□ 0.96
BPTF-201ENST00000306378 KIF9Q9HAQ2 790 aa21.04■□□□□ 0.96
BPTF-201ENST00000306378 CCDC78A2IDD5 438 aa21.04■□□□□ 0.96
BPTF-201ENST00000306378 DEFA1P59665 94 aa21.04■□□□□ 0.96
BPTF-201ENST00000306378 DEFA3P59666 94 aa21.04■□□□□ 0.96
BPTF-201ENST00000306378 NNTQ13423 1086 aa21.04■□□□□ 0.96
BPTF-201ENST00000306378 EFCAB14O75071 495 aa21.04■□□□□ 0.96
BPTF-201ENST00000306378 CHMLP26374 656 aa21.04■□□□□ 0.96
BPTF-201ENST00000306378 MDM2Q00987 491 aaPredicted RBP21.04■□□□□ 0.96
BPTF-201ENST00000306378 NCAPH2Q6IBW4 605 aa21.04■□□□□ 0.96
BPTF-201ENST00000306378 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms