RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 RIBC1Q8N443 379 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 KBTBD3Q8NAB2 608 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 ATP6V1E2Q96A05 226 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 MTRQ99707 1265 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 SIKE1Q9BRV8 207 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 IMPG2Q9BZV3 1241 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 POLE3Q9NRF9 147 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 PODXLO00592 558 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 DDAH1O94760 285 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 PNMA6AP0CW24 399 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 KRT2P35908 639 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 STAT6P42226 847 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 KPNA2P52292 529 aaKnown RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 PDE1CQ14123 709 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 CAVIN4Q5BKX8 364 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 RBM43Q6ZSC3 357 aaKnown RBP5.76□□□□□ -1.49
SCN1A-201ENST00000303395 GBP5Q96PP8 586 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 PANK2Q9BZ23 570 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 SCOCQ9UIL1 159 aa5.76□□□□□ -1.49
SCN1A-201ENST00000303395 IDEP14735 1019 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 WTAPQ15007 396 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 LONRF2Q1L5Z9 754 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 C20orf194Q5TEA3 1177 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 MYSM1Q5VVJ2 828 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 FBXL16Q8N461 479 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 ATP6V0A1Q93050 837 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 SAAL1Q96ER3 474 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 CRNKL1Q9BZJ0 848 aaKnown RBP5.75□□□□□ -1.49
SCN1A-201ENST00000303395 CDC42BPGQ6DT37 1551 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 HNRNPCL2B2RXH8 293 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 TMEM232C9JQI7 657 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 DAPK3O43293 454 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 LIFRP42702 1097 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 GIMAP6Q6P9H5 292 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 DDX27Q96GQ7 796 aaKnown RBP5.75□□□□□ -1.49
SCN1A-201ENST00000303395 BEGAINQ9BUH8 593 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 FAM8A1Q9UBU6 413 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 PPP2R2CQ9Y2T4 447 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 FAM169AQ9Y6X4 670 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 I3L4J1 428 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 CREB3O43889 395 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 GRM1Q13255 1194 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 CEP57Q86XR8 500 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 TTC39CQ8N584 583 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 ARMC2Q8NEN0 867 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 TMC2Q8TDI7 906 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 KIFC3Q9BVG8 833 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 DNAJC25Q9H1X3 360 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 SH3GLB2Q9NR46 395 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 NFKBIL1Q9UBC1 381 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-201ENST00000303395 MYH9P35579 1960 aaKnown RBP5.75□□□□□ -1.49
SCN1A-201ENST00000303395 MAST3O60307 1309 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 PTPDC1A2A3K4 754 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 ZBED6P86452 979 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 AOC3Q16853 763 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 NBPF6Q5VWK0 638 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 CRELD2Q6UXH1 353 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-201ENST00000303395 NBPF4Q96M43 638 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 THAP9Q9H5L6 903 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 USP40Q9NVE5 1235 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 PDP2Q9P2J9 529 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 ZNF215Q9UL58 517 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-201ENST00000303395 ITM2BQ9Y287 266 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 CNPY2Q9Y2B0 182 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 NLRP1Q9C000 1473 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 ZFXP17010 805 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-201ENST00000303395 ANKRD35Q8N283 1001 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 ENAHQ8N8S7 591 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-201ENST00000303395 THUMPD2Q9BTF0 503 aaKnown RBP5.75□□□□□ -1.49
SCN1A-201ENST00000303395 MAK16Q9BXY0 300 aaKnown RBP5.75□□□□□ -1.49
SCN1A-201ENST00000303395 COPRSQ9NQ92 184 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 CABP1Q9NZU7 370 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 BTBD11A6QL63 1104 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 CES2O00748 559 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 KRR1Q13601 381 aaKnown RBP5.75□□□□□ -1.49
SCN1A-201ENST00000303395 KRT79Q5XKE5 535 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 DENND2CQ68D51 928 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 PLA2G4DQ86XP0 818 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 HAUS1Q96CS2 278 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 EFHD1Q9BUP0 239 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 NRDE2Q9H7Z3 1164 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 DDX21Q9NR30 783 aaKnown RBP eCLIP5.75□□□□□ -1.49
SCN1A-201ENST00000303395 ZRANB1Q9UGI0 708 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 TNNQ9UQP3 1299 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 PASKQ96RG2 1323 aa5.75□□□□□ -1.49
SCN1A-201ENST00000303395 LRRC63Q05C16 580 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 PARP10Q53GL7 1025 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 TDRD12Q587J7 1177 aaKnown RBP5.74□□□□□ -1.49
SCN1A-201ENST00000303395 APPBP2Q92624 585 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 ALG1Q9BT22 464 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 RNF26Q9BY78 433 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-201ENST00000303395 IFNKQ9P0W0 207 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 ZFYVE16Q7Z3T8 1539 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 PEX19P40855 299 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 C6orf118Q5T5N4 469 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 ACBD5Q5T8D3 534 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-201ENST00000303395 FAM192AQ9GZU8 254 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 MTMR6Q9Y217 621 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 A0A1W2PP64 1363 aa5.74□□□□□ -1.49
SCN1A-201ENST00000303395 RSPH10B2B2RC85 870 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms