RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ZNF594Q96JF6 807 aaPredicted RBP16.08■□□□□ 0.17
CDT1-201ENST00000301019 THRAP3Q9Y2W1 955 aaKnown RBP16.08■□□□□ 0.17
CDT1-201ENST00000301019 EIF4A1P60842 406 aaKnown RBP16.08■□□□□ 0.16
CDT1-201ENST00000301019 OSBP2Q969R2 916 aa16.08■□□□□ 0.16
CDT1-201ENST00000301019 CABP5Q9NP86 173 aa16.08■□□□□ 0.16
CDT1-201ENST00000301019 LRWD1Q9UFC0 647 aa16.08■□□□□ 0.16
CDT1-201ENST00000301019 PACSIN2Q9UNF0 486 aaPredicted RBP16.08■□□□□ 0.16
CDT1-201ENST00000301019 STK38LQ9Y2H1 464 aa16.08■□□□□ 0.16
CDT1-201ENST00000301019 DIAPH2O60879 1101 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 IPO7O95373 1038 aaKnown RBP16.07■□□□□ 0.16
CDT1-201ENST00000301019 MORC3Q14149 939 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 MDM1Q8TC05 714 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 AENQ8WTP8 325 aaKnown RBP16.07■□□□□ 0.16
CDT1-201ENST00000301019 PAG1Q9NWQ8 432 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 RTN2O75298 545 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 MDM2Q00987 491 aaPredicted RBP16.07■□□□□ 0.16
CDT1-201ENST00000301019 DACH1Q9UI36 760 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 CAPN6Q9Y6Q1 641 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 NFAT5O94916 1531 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 MAST3O60307 1309 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 PYGLP06737 847 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 C8orf74Q6P047 294 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 CPLX4Q7Z7G2 160 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 KLHL7Q8IXQ5 586 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 OXER1Q8TDS5 423 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 NUP133Q8WUM0 1156 aa16.07■□□□□ 0.16
CDT1-201ENST00000301019 DBF4Q9UBU7 674 aaPredicted RBP16.07■□□□□ 0.16
CDT1-201ENST00000301019 FGAP02671 866 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 MCM3P25205 808 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 IRX1P78414 480 aaPredicted RBP16.06■□□□□ 0.16
CDT1-201ENST00000301019 SPATA1Q5VX52 437 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 CAPRIN2Q6IMN6 1127 aaKnown RBP16.06■□□□□ 0.16
CDT1-201ENST00000301019 SAAL1Q96ER3 474 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 MAP3K14Q99558 947 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 UBAC1Q9BSL1 405 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 NOD2Q9HC29 1040 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 RBM12Q9NTZ6 932 aaKnown RBP16.06■□□□□ 0.16
CDT1-201ENST00000301019 B4E1Z4 1266 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 GLI1P08151 1106 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 SPATA4Q8NEY3 305 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 NAA15Q9BXJ9 866 aaKnown RBP16.06■□□□□ 0.16
CDT1-201ENST00000301019 DCDC2CA8MYV0 355 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 TRIM21P19474 475 aaKnown RBP16.06■□□□□ 0.16
CDT1-201ENST00000301019 IARSP41252 1262 aaKnown RBP16.06■□□□□ 0.16
CDT1-201ENST00000301019 SCTRP47872 440 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 ANTXR2P58335 489 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 DDX42Q86XP3 938 aaKnown RBP eCLIP16.06■□□□□ 0.16
CDT1-201ENST00000301019 DIS3L2Q8IYB7 885 aaKnown RBP16.06■□□□□ 0.16
CDT1-201ENST00000301019 GDAQ9Y2T3 454 aa16.06■□□□□ 0.16
CDT1-201ENST00000301019 LUC7L2Q9Y383 392 aaKnown RBP16.06■□□□□ 0.16
CDT1-201ENST00000301019 KDRP35968 1356 aa16.05■□□□□ 0.16
CDT1-201ENST00000301019 ANP32DO95626 131 aa16.05■□□□□ 0.16
CDT1-201ENST00000301019 WLSQ5T9L3 541 aa16.05■□□□□ 0.16
CDT1-201ENST00000301019 KIF2BQ8N4N8 673 aa16.05■□□□□ 0.16
CDT1-201ENST00000301019 KBTBD3Q8NAB2 608 aa16.05■□□□□ 0.16
CDT1-201ENST00000301019 MYH8P13535 1937 aa16.05■□□□□ 0.16
CDT1-201ENST00000301019 A8MUI8 341 aa16.05■□□□□ 0.16
CDT1-201ENST00000301019 CKAP4Q07065 602 aaKnown RBP16.05■□□□□ 0.16
CDT1-201ENST00000301019 NUP58Q9BVL2 599 aa16.05■□□□□ 0.16
CDT1-201ENST00000301019 SLC39A2Q9NP94 309 aa16.05■□□□□ 0.16
CDT1-201ENST00000301019 PXDNQ92626 1479 aa16.04■□□□□ 0.16
CDT1-201ENST00000301019 SLIT3O75094 1523 aa16.04■□□□□ 0.16
CDT1-201ENST00000301019 ATP5JP18859 108 aa16.04■□□□□ 0.16
CDT1-201ENST00000301019 MDH1P40925 334 aaKnown RBP16.04■□□□□ 0.16
CDT1-201ENST00000301019 ZKSCAN8Q15776 578 aaPredicted RBP16.04■□□□□ 0.16
CDT1-201ENST00000301019 SPICE1Q8N0Z3 855 aa16.04■□□□□ 0.16
CDT1-201ENST00000301019 IP6K1Q92551 441 aa16.04■□□□□ 0.16
CDT1-201ENST00000301019 A0A1B0GVG6 124 aa16.04■□□□□ 0.16
CDT1-201ENST00000301019 KRT86O43790 486 aa16.04■□□□□ 0.16
CDT1-201ENST00000301019 TUBBP07437 444 aa16.04■□□□□ 0.16
CDT1-201ENST00000301019 COPB1P53618 953 aaKnown RBP16.04■□□□□ 0.16
CDT1-201ENST00000301019 TYW1BQ6NUM6 668 aa16.04■□□□□ 0.16
CDT1-201ENST00000301019 KSR2Q6VAB6 950 aa16.04■□□□□ 0.16
CDT1-201ENST00000301019 HVCN1Q96D96 273 aa16.04■□□□□ 0.16
CDT1-201ENST00000301019 ETAA1Q9NY74 926 aa16.04■□□□□ 0.16
CDT1-201ENST00000301019 LEMD3Q9Y2U8 911 aa16.04■□□□□ 0.16
CDT1-201ENST00000301019 TOB1P50616 345 aaPredicted RBP16.04■□□□□ 0.16
CDT1-201ENST00000301019 IMMTQ16891 758 aaKnown RBP16.04■□□□□ 0.16
CDT1-201ENST00000301019 UHMK1Q8TAS1 419 aaKnown RBP16.04■□□□□ 0.16
CDT1-201ENST00000301019 A1CFQ9NQ94 594 aaKnown RBP16.04■□□□□ 0.16
CDT1-201ENST00000301019 KCNJ18B7U540 433 aa16.03■□□□□ 0.16
CDT1-201ENST00000301019 IFIT1P09914 478 aaKnown RBP16.03■□□□□ 0.16
CDT1-201ENST00000301019 KCNJ12Q14500 433 aa16.03■□□□□ 0.16
CDT1-201ENST00000301019 TTF1Q15361 905 aaPredicted RBP16.03■□□□□ 0.16
CDT1-201ENST00000301019 BZW1Q7L1Q6 419 aaKnown RBP16.03■□□□□ 0.16
CDT1-201ENST00000301019 MSL3Q8N5Y2 521 aaKnown RBP16.03■□□□□ 0.16
CDT1-201ENST00000301019 C3orf20Q8ND61 904 aa16.03■□□□□ 0.16
CDT1-201ENST00000301019 PLAAQ9Y263 795 aa16.03■□□□□ 0.16
CDT1-201ENST00000301019 PALLDQ8WX93 1383 aa16.03■□□□□ 0.16
CDT1-201ENST00000301019 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
CDT1-201ENST00000301019 ALS2Q96Q42 1657 aa16.03■□□□□ 0.16
CDT1-201ENST00000301019 ARHGEF10O15013 1369 aa16.03■□□□□ 0.16
CDT1-201ENST00000301019 SPATA31A3Q5VYP0 1347 aa16.03■□□□□ 0.16
CDT1-201ENST00000301019 HEXIM1O94992 359 aaKnown RBP16.03■□□□□ 0.16
CDT1-201ENST00000301019 MRPL12P52815 198 aaKnown RBP16.03■□□□□ 0.16
CDT1-201ENST00000301019 ANKRD20A8PQ5CZ79 823 aa16.03■□□□□ 0.16
CDT1-201ENST00000301019 KRT12Q99456 494 aa16.03■□□□□ 0.16
CDT1-201ENST00000301019 B4DLN1 442 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 IGKV5-2P06315 115 aa16.02■□□□□ 0.16
CDT1-201ENST00000301019 PDHA1P08559 390 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms