RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PAGE5Q96GU1 130 aa24.89■■□□□ 1.58
TPM4-201ENST00000300933 PLIN2Q99541 437 aa24.89■■□□□ 1.58
TPM4-201ENST00000300933 TCP11L1Q9NUJ3 509 aa24.89■■□□□ 1.58
TPM4-201ENST00000300933 PCDHA4Q9UN74 947 aa24.89■■□□□ 1.58
TPM4-201ENST00000300933 SARSP49591 514 aaKnown RBP24.89■■□□□ 1.58
TPM4-201ENST00000300933 TMEM51Q9NW97 253 aa24.89■■□□□ 1.58
TPM4-201ENST00000300933 ANKRD31Q8N7Z5 1873 aa24.89■■□□□ 1.57
TPM4-201ENST00000300933 FAM196BA6NMK8 535 aa24.89■■□□□ 1.57
TPM4-201ENST00000300933 PP2D1A8MPX8 630 aa24.89■■□□□ 1.57
TPM4-201ENST00000300933 AKR1B1P15121 316 aa24.89■■□□□ 1.57
TPM4-201ENST00000300933 CCZ1BP86790 482 aa24.89■■□□□ 1.57
TPM4-201ENST00000300933 CCZ1P86791 482 aaPredicted RBP24.89■■□□□ 1.57
TPM4-201ENST00000300933 NFIAQ12857 509 aa24.89■■□□□ 1.57
TPM4-201ENST00000300933 ARMCX5Q6P1M9 558 aa24.89■■□□□ 1.57
TPM4-201ENST00000300933 ZFPM1Q8IX07 1006 aa24.89■■□□□ 1.57
TPM4-201ENST00000300933 PCDHA6Q9UN73 950 aa24.89■■□□□ 1.57
TPM4-201ENST00000300933 PCDHA8Q9Y5H6 950 aa24.89■■□□□ 1.57
TPM4-201ENST00000300933 KIAA0825Q8IV33 1275 aa24.88■■□□□ 1.57
TPM4-201ENST00000300933 SLF2Q8IX21 1173 aa24.88■■□□□ 1.57
TPM4-201ENST00000300933 ZNF287Q9HBT7 754 aa24.88■■□□□ 1.57
TPM4-201ENST00000300933 CCDC194A0A1B0GVG4 234 aa24.88■■□□□ 1.57
TPM4-201ENST00000300933 STXBP3O00186 592 aa24.88■■□□□ 1.57
TPM4-201ENST00000300933 PARP1P09874 1014 aaKnown RBP24.88■■□□□ 1.57
TPM4-201ENST00000300933 CHRNA5P30532 468 aa24.88■■□□□ 1.57
TPM4-201ENST00000300933 ATP2B2Q01814 1243 aa24.88■■□□□ 1.57
TPM4-201ENST00000300933 MORC3Q14149 939 aa24.88■■□□□ 1.57
TPM4-201ENST00000300933 FERMT2Q96AC1 680 aa24.88■■□□□ 1.57
TPM4-201ENST00000300933 TMEM60Q9H2L4 133 aa24.88■■□□□ 1.57
TPM4-201ENST00000300933 NFE2L3Q9Y4A8 694 aa24.88■■□□□ 1.57
TPM4-201ENST00000300933 TCP10Q12799 353 aa24.87■■□□□ 1.57
TPM4-201ENST00000300933 CCAR2Q8N163 923 aaKnown RBP24.87■■□□□ 1.57
TPM4-201ENST00000300933 ERO1AQ96HE7 468 aa24.87■■□□□ 1.57
TPM4-201ENST00000300933 PIGSQ96S52 555 aa24.87■■□□□ 1.57
TPM4-201ENST00000300933 SAMSN1Q9NSI8 373 aaKnown RBP24.87■■□□□ 1.57
TPM4-201ENST00000300933 DDX60LQ5H9U9 1706 aaKnown RBP24.87■■□□□ 1.57
TPM4-201ENST00000300933 SHROOM1Q2M3G4 852 aaPredicted RBP24.87■■□□□ 1.57
TPM4-201ENST00000300933 CD44P16070 742 aaKnown RBP24.86■■□□□ 1.57
TPM4-201ENST00000300933 CALML3P27482 149 aa24.86■■□□□ 1.57
TPM4-201ENST00000300933 MYH1P12882 1939 aa24.86■■□□□ 1.57
TPM4-201ENST00000300933 NEMFO60524 1076 aa24.86■■□□□ 1.57
TPM4-201ENST00000300933 SLU7O95391 586 aaKnown RBP24.86■■□□□ 1.57
TPM4-201ENST00000300933 GNAQP50148 359 aa24.86■■□□□ 1.57
TPM4-201ENST00000300933 NAPAP54920 295 aa24.86■■□□□ 1.57
TPM4-201ENST00000300933 ZNF446Q9NWS9 450 aa24.86■■□□□ 1.57
TPM4-201ENST00000300933 BARHL2Q9NY43 387 aa24.86■■□□□ 1.57
TPM4-201ENST00000300933 GPCPD1Q9NPB8 672 aa24.85■■□□□ 1.57
TPM4-201ENST00000300933 RAD21O60216 631 aa24.85■■□□□ 1.57
TPM4-201ENST00000300933 KARSQ15046 597 aaKnown RBP24.85■■□□□ 1.57
TPM4-201ENST00000300933 NT5DC1Q5TFE4 455 aa24.85■■□□□ 1.57
TPM4-201ENST00000300933 CDC42EP5Q6NZY7 148 aa24.85■■□□□ 1.57
TPM4-201ENST00000300933 C4orf32Q8N8J7 132 aa24.85■■□□□ 1.57
TPM4-201ENST00000300933 MTRQ99707 1265 aa24.85■■□□□ 1.57
TPM4-201ENST00000300933 PLSCR1O15162 318 aa24.84■■□□□ 1.57
TPM4-201ENST00000300933 CDK11BP21127 795 aaKnown RBP24.84■■□□□ 1.57
TPM4-201ENST00000300933 ALDH1B1P30837 517 aa24.84■■□□□ 1.57
TPM4-201ENST00000300933 PDE6BP35913 854 aa24.84■■□□□ 1.57
TPM4-201ENST00000300933 ERCC6LQ2NKX8 1250 aa24.84■■□□□ 1.57
TPM4-201ENST00000300933 C2CD5Q86YS7 1000 aa24.84■■□□□ 1.57
TPM4-201ENST00000300933 MPHOSPH10O00566 681 aaKnown RBP24.84■■□□□ 1.57
TPM4-201ENST00000300933 MASTLQ96GX5 879 aa24.84■■□□□ 1.57
TPM4-201ENST00000300933 INTS13Q9NVM9 706 aa24.84■■□□□ 1.57
TPM4-201ENST00000300933 CCDC66A2RUB6 948 aa24.83■■□□□ 1.57
TPM4-201ENST00000300933 M0R2N6 131 aa24.83■■□□□ 1.57
TPM4-201ENST00000300933 TOP1P11387 765 aaKnown RBP24.83■■□□□ 1.57
TPM4-201ENST00000300933 RBM5P52756 815 aaKnown RBP eCLIP24.83■■□□□ 1.578e-6■■■■□ 20.7
TPM4-201ENST00000300933 CCDC178Q5BJE1 867 aa24.83■■□□□ 1.57
TPM4-201ENST00000300933 LRRN4CLQ8ND94 238 aa24.83■■□□□ 1.57
TPM4-201ENST00000300933 SMCO2A6NFE2 343 aa24.83■■□□□ 1.57
TPM4-201ENST00000300933 VGLL3A8MV65 326 aa24.83■■□□□ 1.57
TPM4-201ENST00000300933 COA7Q96BR5 231 aa24.83■■□□□ 1.57
TPM4-201ENST00000300933 TMX4Q9H1E5 349 aaPredicted RBP24.83■■□□□ 1.57
TPM4-201ENST00000300933 MAPK8IP1Q9UQF2 711 aa24.83■■□□□ 1.57
TPM4-201ENST00000300933 BMP15O95972 392 aa24.82■■□□□ 1.56
TPM4-201ENST00000300933 CUL4BQ13620 913 aa24.82■■□□□ 1.56
TPM4-201ENST00000300933 APOBEC3HQ6NTF7 200 aaKnown RBP24.82■■□□□ 1.56
TPM4-201ENST00000300933 KANK3Q6NY19 840 aa24.82■■□□□ 1.56
TPM4-201ENST00000300933 MTMR4Q9NYA4 1195 aa24.82■■□□□ 1.56
TPM4-201ENST00000300933 BIN2Q9UBW5 565 aaPredicted RBP24.82■■□□□ 1.56
TPM4-201ENST00000300933 ADAMTSL1Q8N6G6 1762 aa24.82■■□□□ 1.56
TPM4-201ENST00000300933 LETM2Q2VYF4 491 aa24.82■■□□□ 1.56
TPM4-201ENST00000300933 JAKMIP3Q5VZ66 844 aa24.82■■□□□ 1.56
TPM4-201ENST00000300933 SPATA20Q8TB22 786 aa24.82■■□□□ 1.56
TPM4-201ENST00000300933 OSBPL5Q9H0X9 879 aaPredicted RBP24.82■■□□□ 1.56
TPM4-201ENST00000300933 TMEM260Q9NX78 707 aa24.82■■□□□ 1.56
TPM4-201ENST00000300933 DPYDQ12882 1025 aa24.81■■□□□ 1.56
TPM4-201ENST00000300933 TMC4Q7Z404 712 aa24.81■■□□□ 1.56
TPM4-201ENST00000300933 SH3RF1Q7Z6J0 888 aa24.81■■□□□ 1.56
TPM4-201ENST00000300933 MLKLQ8NB16 471 aa24.81■■□□□ 1.56
TPM4-201ENST00000300933 SH3GLB2Q9NR46 395 aa24.81■■□□□ 1.56
TPM4-201ENST00000300933 PDHBP11177 359 aa24.81■■□□□ 1.56
TPM4-201ENST00000300933 CERS3Q8IU89 383 aa24.81■■□□□ 1.56
TPM4-201ENST00000300933 SERPINB13Q9UIV8 391 aa24.81■■□□□ 1.56
TPM4-201ENST00000300933 SFPQP23246 707 aaKnown RBP eCLIP24.8■■□□□ 1.56
TPM4-201ENST00000300933 SLC16A2P36021 539 aa24.8■■□□□ 1.56
TPM4-201ENST00000300933 TRAPPC10P48553 1259 aa24.8■■□□□ 1.56
TPM4-201ENST00000300933 GABPAQ06546 454 aa24.8■■□□□ 1.56
TPM4-201ENST00000300933 E2F4Q16254 413 aa24.8■■□□□ 1.56
TPM4-201ENST00000300933 TTBK2Q6IQ55 1244 aa24.8■■□□□ 1.56
TPM4-201ENST00000300933 ELOA2Q8IYF1 753 aaPredicted RBP24.8■■□□□ 1.56
TPM4-201ENST00000300933 RASSF8Q8NHQ8 419 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms