RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 TRIM49BA6NDI0 452 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 GTPBP6O43824 516 aaPredicted RBP14.57□□□□□ -0.08
HIF3A-204ENST00000300862 MFAP3LO75121 409 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 RPN1P04843 607 aaKnown RBP14.57□□□□□ -0.08
HIF3A-204ENST00000300862 CCDC175P0C221 793 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 IRX5P78411 483 aaPredicted RBP14.57□□□□□ -0.08
HIF3A-204ENST00000300862 MAP3K9P80192 1104 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 EEF2KMTQ96G04 330 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 PCDHA4Q9UN74 947 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 ADGRG1Q9Y653 693 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 IRS2Q9Y4H2 1338 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 CCDC194A0A1B0GVG4 234 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 SEC31AO94979 1220 aaKnown RBP14.57□□□□□ -0.08
HIF3A-204ENST00000300862 ABL1P00519 1130 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 CALML3P27482 149 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 PRCPP42785 496 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 PAK1Q13153 545 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 BMS1Q14692 1282 aaKnown RBP14.57□□□□□ -0.08
HIF3A-204ENST00000300862 TEX35Q5T0J7 233 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 DGKHQ86XP1 1220 aa14.57□□□□□ -0.08
HIF3A-204ENST00000300862 PDS5AQ29RF7 1337 aaKnown RBP14.57□□□□□ -0.08
HIF3A-204ENST00000300862 GOLGA6L9A6NEM1 432 aa14.56□□□□□ -0.08
HIF3A-204ENST00000300862 PNMA6AP0CW24 399 aaPredicted RBP14.56□□□□□ -0.08
HIF3A-204ENST00000300862 PPP2R3AQ06190 1150 aa14.56□□□□□ -0.08
HIF3A-204ENST00000300862 SPTY2D1Q68D10 685 aaPredicted RBP14.56□□□□□ -0.08
HIF3A-204ENST00000300862 ZNF444Q8N0Y2 327 aaPredicted RBP14.56□□□□□ -0.08
HIF3A-204ENST00000300862 ACRBPQ8NEB7 543 aa14.56□□□□□ -0.08
HIF3A-204ENST00000300862 CTAGE1Q96RT6 745 aa14.56□□□□□ -0.08
HIF3A-204ENST00000300862 PCDHA6Q9UN73 950 aa14.56□□□□□ -0.08
HIF3A-204ENST00000300862 PCDHA8Q9Y5H6 950 aa14.56□□□□□ -0.08
HIF3A-204ENST00000300862 MRFAP1Q9Y605 127 aa14.56□□□□□ -0.08
HIF3A-204ENST00000300862 DLEC1Q9Y238 1755 aa14.56□□□□□ -0.08
HIF3A-204ENST00000300862 PLA2G4AP47712 749 aa14.56□□□□□ -0.08
HIF3A-204ENST00000300862 TMEM47Q9BQJ4 181 aa14.56□□□□□ -0.08
HIF3A-204ENST00000300862 EFCAB8A8MWE9 144 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 TFRCP02786 760 aaKnown RBP14.55□□□□□ -0.08
HIF3A-204ENST00000300862 CYP2C19P33261 490 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 PMS1P54277 932 aaKnown RBP14.55□□□□□ -0.08
HIF3A-204ENST00000300862 GRM4Q14833 912 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 NAALADL2Q58DX5 795 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 CT47A1Q5JQC4 288 aaPredicted RBP14.55□□□□□ -0.08
HIF3A-204ENST00000300862 ZNF658Q5TYW1 1059 aaPredicted RBP14.55□□□□□ -0.08
HIF3A-204ENST00000300862 DTHD1Q6ZMT9 781 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 SRRTQ9BXP5 876 aaKnown RBP14.55□□□□□ -0.08
HIF3A-204ENST00000300862 RWDD2AQ9UIY3 292 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 KCNJ18B7U540 433 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 PES1O00541 588 aaKnown RBP14.55□□□□□ -0.08
HIF3A-204ENST00000300862 LONP1P36776 959 aaKnown RBP14.55□□□□□ -0.08
HIF3A-204ENST00000300862 TXLNAP40222 546 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 COPB1P53618 953 aaKnown RBP14.55□□□□□ -0.08
HIF3A-204ENST00000300862 FAM193AP78312 1265 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 KCNJ12Q14500 433 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 WDR66Q8TBY9 1149 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 LRRC15Q8TF66 581 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 VAT1LQ9HCJ6 419 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 DISC1Q9NRI5 854 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 EP400Q96L91 3159 aa14.55□□□□□ -0.08
HIF3A-204ENST00000300862 KIAA1551Q9HCM1 1747 aa14.54□□□□□ -0.08
HIF3A-204ENST00000300862 M0R2N6 131 aa14.54□□□□□ -0.08
HIF3A-204ENST00000300862 ZRANB2O95218 330 aaKnown RBP eCLIP14.54□□□□□ -0.08
HIF3A-204ENST00000300862 RFC4P35249 363 aa14.54□□□□□ -0.08
HIF3A-204ENST00000300862 ERVK-24P63145 666 aa14.54□□□□□ -0.08
HIF3A-204ENST00000300862 TCP11X2Q5H9J9 407 aa14.54□□□□□ -0.08
HIF3A-204ENST00000300862 RC3H1Q5TC82 1133 aaKnown RBP14.54□□□□□ -0.08
HIF3A-204ENST00000300862 ARL6IP4Q66PJ3 421 aaKnown RBP14.54□□□□□ -0.08
HIF3A-204ENST00000300862 NUP88Q99567 741 aaPredicted RBP14.54□□□□□ -0.08
HIF3A-204ENST00000300862 STXBP3O00186 592 aa14.54□□□□□ -0.08
HIF3A-204ENST00000300862 RASA1P20936 1047 aa14.54□□□□□ -0.08
HIF3A-204ENST00000300862 ZNF569Q5MCW4 686 aa14.54□□□□□ -0.08
HIF3A-204ENST00000300862 LIMA1Q9UHB6 759 aaKnown RBP14.54□□□□□ -0.08
HIF3A-204ENST00000300862 GOLGB1Q14789 3259 aaKnown RBP14.54□□□□□ -0.08
HIF3A-204ENST00000300862 KLRF2D3W0D1 207 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 BAG3O95817 575 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 UBA7P41226 1012 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 USP17L2Q6R6M4 530 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 TMCO3Q6UWJ1 677 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 IRF2BP1Q8IU81 584 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 PUF60Q9UHX1 559 aaKnown RBP14.53□□□□□ -0.08
HIF3A-204ENST00000300862 LAMB1P07942 1786 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 UBXN1Q04323 297 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 GRAPQ13588 217 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 CNGA4Q8IV77 575 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 GRAPLQ8TC17 118 aaPredicted RBP14.53□□□□□ -0.08
HIF3A-204ENST00000300862 ZBTB9Q96C00 473 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 SH3GLB2Q9NR46 395 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 BARHL2Q9NY43 387 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 CALCOCO1Q9P1Z2 691 aa14.53□□□□□ -0.08
HIF3A-204ENST00000300862 LRRC10BA6NIK2 292 aa14.52□□□□□ -0.08
HIF3A-204ENST00000300862 BTDP43251 543 aa14.52□□□□□ -0.08
HIF3A-204ENST00000300862 GPSM2P81274 684 aa14.52□□□□□ -0.08
HIF3A-204ENST00000300862 LETM2Q2VYF4 491 aa14.52□□□□□ -0.08
HIF3A-204ENST00000300862 AMOTL1Q8IY63 956 aa14.52□□□□□ -0.08
HIF3A-204ENST00000300862 ABHD10Q9NUJ1 306 aa14.52□□□□□ -0.08
HIF3A-204ENST00000300862 CCDC88AQ3V6T2 1871 aa14.52□□□□□ -0.08
HIF3A-204ENST00000300862 MYH8P13535 1937 aa14.52□□□□□ -0.08
HIF3A-204ENST00000300862 TPM1P09493 284 aa14.52□□□□□ -0.09
HIF3A-204ENST00000300862 PARP1P09874 1014 aaKnown RBP14.52□□□□□ -0.09
HIF3A-204ENST00000300862 KRT9P35527 623 aa14.52□□□□□ -0.09
HIF3A-204ENST00000300862 FAM196AQ6ZSG2 479 aa14.52□□□□□ -0.09
HIF3A-204ENST00000300862 CNBD1Q8NA66 436 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms