RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CYP4A11Q02928 519 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 PHLDB2Q86SQ0 1253 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 AFAP1L2Q8N4X5 818 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 CCDC127Q96BQ5 260 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ZMYM4Q5VZL5 1548 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ARHGAP42A6NI28 874 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 CHL1O00533 1208 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 STX2P32856 288 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 LLGL1Q15334 1064 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 BLIDQ8IZY5 108 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 RGS16O15492 202 aaPredicted RBP14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 XRCC5P13010 732 aaKnown RBP14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 GNGT1P63211 74 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 CEP128Q6ZU80 1094 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 BCS1LQ9Y276 419 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SAR1BQ9Y6B6 198 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 NDUFA8P51970 172 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 RUFY4Q6ZNE9 571 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ZNF518AQ6AHZ1 1483 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 VGLL3A8MV65 326 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 NCAPG2Q86XI2 1143 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SPICE1Q8N0Z3 855 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 TSTA3Q13630 321 aaPredicted RBP14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 MYOCDQ8IZQ8 938 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ANKRD13CQ8N6S4 541 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ZMYM3Q14202 1370 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 AOX1Q06278 1338 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 DKC1O60832 514 aaKnown RBP eCLIP14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 BAG2O95816 211 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 PLCB1Q9NQ66 1216 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 RTEL1Q9NZ71 1219 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 BZW2Q9Y6E2 419 aaKnown RBP14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 BTDP43251 543 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 MYSM1Q5VVJ2 828 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 TTBK2Q6IQ55 1244 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 EFCC1Q9HA90 598 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 CAPN9O14815 690 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 OTUD6AQ7L8S5 288 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 TRIM50Q86XT4 487 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 NME8Q8N427 588 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SYMPKQ92797 1274 aaKnown RBP14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 DSCC1Q9BVC3 393 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 FANCLQ9NW38 375 aa14.93□□□□□ -0.02
CHRFAM7A-201ENST00000299847 TUBBP07437 444 aa14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 RFX1P22670 979 aa14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ADORA1P30542 326 aa14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SMYD4Q8IYR2 804 aaPredicted RBP14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 RASGRP4Q8TDF6 673 aa14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 PPP1R16BQ96T49 567 aa14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ARPP21Q9UBL0 812 aaPredicted RBP14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 NOSTRINQ8IVI9 506 aa14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 GBP7Q8N8V2 638 aaPredicted RBP14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 BCL2L12Q9HB09 334 aa14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 PPM1KQ8N3J5 372 aa14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 USP21Q9UK80 565 aa14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 RFC1P35251 1148 aaPredicted RBP14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 STAT1P42224 750 aa14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ZNF445P59923 1031 aa14.92□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ENC1O14682 589 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 LZTS2Q9BRK4 669 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SMYD2Q9NRG4 433 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 PCDHA12Q9UN75 941 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 PPP2R2CQ9Y2T4 447 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 TNKSO95271 1327 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 PIK3CAP42336 1068 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 TLR7Q9NYK1 1049 aaKnown RBP14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 KIAA1468Q9P260 1216 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ZMYM6O95789 1325 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ANKRD20A3Q5VUR7 823 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 TEKT1Q969V4 418 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 FRMD3A2A2Y4 597 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SLC4A1P02730 911 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 RPN1P04843 607 aaKnown RBP14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 HSPD1P10809 573 aaKnown RBP14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 GPT2Q8TD30 523 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 DDX27Q96GQ7 796 aaKnown RBP14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 CLRN2A0PK11 232 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 BTBD18B2RXH4 712 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ZMYND10O75800 440 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ATP5JP18859 108 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 RPS6KA2Q15349 733 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 Q3C1V9 767 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 LGSNQ5TDP6 509 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SKA2Q8WVK7 121 aaPredicted RBP14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 GLT8D2Q9H1C3 349 aa14.91□□□□□ -0.02
CHRFAM7A-201ENST00000299847 PDE6CP51160 858 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 TUBB2AQ13885 445 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 TUBB2BQ9BVA1 445 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 LRRIQ4A6NIV6 560 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 M0R2C6 588 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 OATP04181 439 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 KCNQ4P56696 695 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 RASSF7Q02833 373 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 MTMR3Q13615 1198 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 PNMA1Q8ND90 353 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 GJA10Q969M2 543 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 PUS3Q9BZE2 481 aaKnown RBP14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 STK24Q9Y6E0 443 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 KLRF2D3W0D1 207 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 POLR2MP0CAP2 368 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms