RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 BAZ2AQ9UIF9 1905 aaKnown RBP15.35■□□□□ 0.05
CDH8-201ENST00000299345 F8W031 263 aaPredicted RBP15.35■□□□□ 0.05
CDH8-201ENST00000299345 PSMA7O14818 248 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 SERPINB2P05120 415 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 GRIK5Q16478 980 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 ZNF658Q5TYW1 1059 aaPredicted RBP15.35■□□□□ 0.05
CDH8-201ENST00000299345 PRR5LQ6MZQ0 368 aa15.35■□□□□ 0.05
CDH8-201ENST00000299345 PCMTD1Q96MG8 357 aaPredicted RBP15.35■□□□□ 0.05
CDH8-201ENST00000299345 SMCO2A6NFE2 343 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 NONOQ15233 471 aaKnown RBP eCLIP15.34■□□□□ 0.05
CDH8-201ENST00000299345 KRT25Q7Z3Z0 450 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 AMIGO3Q86WK7 504 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 MED15Q96RN5 788 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 NAA15Q9BXJ9 866 aaKnown RBP15.34■□□□□ 0.05
CDH8-201ENST00000299345 DISC1Q9NRI5 854 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 RWDD2AQ9UIY3 292 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 FAM205AQ6ZU69 1335 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 CCNT1O60563 726 aaKnown RBP15.34■□□□□ 0.05
CDH8-201ENST00000299345 RASA1P20936 1047 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 CASP14P31944 242 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 ATP2B2Q01814 1243 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 PANX2Q96RD6 677 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 BARHL2Q9NY43 387 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 ADD3Q9UEY8 706 aaKnown RBP15.34■□□□□ 0.05
CDH8-201ENST00000299345 MAD2L2Q9UI95 211 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 RAD21O60216 631 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 UBXN1Q04323 297 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 TEX35Q5T0J7 233 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 FBXO38Q6PIJ6 1188 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 USP17L2Q6R6M4 530 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 TBC1D22AQ8WUA7 517 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 GDAQ9Y2T3 454 aa15.34■□□□□ 0.05
CDH8-201ENST00000299345 SOWAHDA6NJG2 315 aa15.33■□□□□ 0.05
CDH8-201ENST00000299345 KCNJ18B7U540 433 aa15.33■□□□□ 0.05
CDH8-201ENST00000299345 RIMBP2O15034 1052 aa15.33■□□□□ 0.05
CDH8-201ENST00000299345 KCNJ12Q14500 433 aa15.33■□□□□ 0.05
CDH8-201ENST00000299345 CDK5RAP3Q96JB5 506 aa15.33■□□□□ 0.05
CDH8-201ENST00000299345 PCDHA6Q9UN73 950 aa15.33■□□□□ 0.05
CDH8-201ENST00000299345 PCDHA8Q9Y5H6 950 aa15.33■□□□□ 0.05
CDH8-201ENST00000299345 TAF1P21675 1872 aa15.33■□□□□ 0.05
CDH8-201ENST00000299345 PP2D1A8MPX8 630 aa15.33■□□□□ 0.04
CDH8-201ENST00000299345 KRT31Q15323 416 aa15.33■□□□□ 0.04
CDH8-201ENST00000299345 KMT5BQ4FZB7 885 aa15.33■□□□□ 0.04
CDH8-201ENST00000299345 COL4A1P02462 1669 aa15.33■□□□□ 0.04
CDH8-201ENST00000299345 GTF2IP78347 998 aa15.33■□□□□ 0.04
CDH8-201ENST00000299345 JAKMIP3Q5VZ66 844 aa15.33■□□□□ 0.04
CDH8-201ENST00000299345 PDXDC2PQ6P474 469 aa15.33■□□□□ 0.04
CDH8-201ENST00000299345 TMCO3Q6UWJ1 677 aa15.33■□□□□ 0.04
CDH8-201ENST00000299345 SLC51AQ86UW1 340 aa15.33■□□□□ 0.04
CDH8-201ENST00000299345 ANKS1AQ92625 1134 aa15.33■□□□□ 0.04
CDH8-201ENST00000299345 COPB1P53618 953 aaKnown RBP15.32■□□□□ 0.04
CDH8-201ENST00000299345 E2F4Q16254 413 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 UBA5Q9GZZ9 404 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 BBOX1O75936 387 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 ASIC1P78348 528 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 MTF1Q14872 753 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 CDKAL1Q5VV42 579 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 TYW1BQ6NUM6 668 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 CABP7Q86V35 215 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 KRT222Q8N1A0 295 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 CALML4Q96GE6 196 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 LAD1O00515 517 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 IL17AQ16552 155 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 KIF4BQ2VIQ3 1234 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 TRIM65Q6PJ69 517 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 CCDC51Q96ER9 411 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 TMEM60Q9H2L4 133 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 EXOC1Q9NV70 894 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 CACNA1SQ13698 1873 aa15.32■□□□□ 0.04
CDH8-201ENST00000299345 H7C1D1 291 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 ADAMTS3O15072 1205 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 MFAP3LO75121 409 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 OR52Z1P0C646 297 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 ADRA2BP18089 450 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 KRT9P35527 623 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 AMPD3Q01432 767 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 TMEM139Q8IV31 216 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 NEDD1Q8NHV4 660 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 RTFDC1Q9BY42 306 aaPredicted RBP15.31■□□□□ 0.04
CDH8-201ENST00000299345 MKRN1Q9UHC7 482 aaKnown RBP15.31■□□□□ 0.04
CDH8-201ENST00000299345 PALM3A6NDB9 673 aaPredicted RBP15.31■□□□□ 0.04
CDH8-201ENST00000299345 STXBP3O00186 592 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 PRCPP42785 496 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 EIF6P56537 245 aaKnown RBP15.31■□□□□ 0.04
CDH8-201ENST00000299345 FNBP4Q8N3X1 1017 aaPredicted RBP15.31■□□□□ 0.04
CDH8-201ENST00000299345 CYTH3O43739 400 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 IPO7O95373 1038 aaKnown RBP15.31■□□□□ 0.04
CDH8-201ENST00000299345 BMS1Q14692 1282 aaKnown RBP15.31■□□□□ 0.04
CDH8-201ENST00000299345 NEK8Q86SG6 692 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 TMTC1Q8IUR5 882 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 REXO1Q8N1G1 1221 aaKnown RBP15.31■□□□□ 0.04
CDH8-201ENST00000299345 WDR24Q96S15 920 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 ZC3H12CQ9C0D7 883 aaKnown RBP15.31■□□□□ 0.04
CDH8-201ENST00000299345 ZSWIM4Q9H7M6 989 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 BIN2Q9UBW5 565 aaPredicted RBP15.31■□□□□ 0.04
CDH8-201ENST00000299345 DDX41Q9UJV9 622 aaKnown RBP15.31■□□□□ 0.04
CDH8-201ENST00000299345 BCORQ6W2J9 1755 aa15.31■□□□□ 0.04
CDH8-201ENST00000299345 GPR75-ASB3A0A0A6YYF3 556 aa15.3■□□□□ 0.04
CDH8-201ENST00000299345 PPP2R3AQ06190 1150 aa15.3■□□□□ 0.04
CDH8-201ENST00000299345 TCP11X2Q5H9J9 407 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms