RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 RARBP10826 455 aa24.84■■□□□ 1.57
SMCO4-201ENST00000298966 XPNPEP3Q9NQH7 507 aa24.84■■□□□ 1.57
SMCO4-201ENST00000298966 FCER1AP12319 257 aa24.83■■□□□ 1.57
SMCO4-201ENST00000298966 RAG1P15918 1043 aa24.83■■□□□ 1.57
SMCO4-201ENST00000298966 DSG3P32926 999 aa24.83■■□□□ 1.57
SMCO4-201ENST00000298966 RNF180Q86T96 592 aa24.83■■□□□ 1.57
SMCO4-201ENST00000298966 NRBP1Q9UHY1 535 aa24.83■■□□□ 1.57
SMCO4-201ENST00000298966 KIAA0355O15063 1070 aa24.82■■□□□ 1.56
SMCO4-201ENST00000298966 ITGB8P26012 769 aa24.82■■□□□ 1.56
SMCO4-201ENST00000298966 GABPAQ06546 454 aa24.82■■□□□ 1.56
SMCO4-201ENST00000298966 TJAP1Q5JTD0 557 aa24.82■■□□□ 1.56
SMCO4-201ENST00000298966 SLC9C2Q5TAH2 1124 aa24.82■■□□□ 1.56
SMCO4-201ENST00000298966 FLOT1O75955 427 aa24.81■■□□□ 1.56
SMCO4-201ENST00000298966 PDE6AP16499 860 aa24.81■■□□□ 1.56
SMCO4-201ENST00000298966 HSPA4P34932 840 aa24.81■■□□□ 1.56
SMCO4-201ENST00000298966 EPHB4P54760 987 aa24.81■■□□□ 1.56
SMCO4-201ENST00000298966 FPGSQ05932 587 aa24.81■■□□□ 1.56
SMCO4-201ENST00000298966 MAP4K1Q92918 833 aa24.81■■□□□ 1.56
SMCO4-201ENST00000298966 ATG4CQ96DT6 458 aa24.81■■□□□ 1.56
SMCO4-201ENST00000298966 RIOK1Q9BRS2 568 aaKnown RBP24.81■■□□□ 1.56
SMCO4-201ENST00000298966 DSCC1Q9BVC3 393 aa24.81■■□□□ 1.56
SMCO4-201ENST00000298966 IL25Q9H293 177 aa24.81■■□□□ 1.56
SMCO4-201ENST00000298966 MCM9Q9NXL9 1143 aa24.81■■□□□ 1.56
SMCO4-201ENST00000298966 MAGEB6P1A0A0J9YX57 407 aa24.8■■□□□ 1.56
SMCO4-201ENST00000298966 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.8■■□□□ 1.56
SMCO4-201ENST00000298966 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.8■■□□□ 1.56
SMCO4-201ENST00000298966 PQBP1O60828 265 aaKnown RBP24.8■■□□□ 1.56
SMCO4-201ENST00000298966 GRIN2CQ14957 1233 aa24.8■■□□□ 1.56
SMCO4-201ENST00000298966 RABEP1Q15276 862 aa24.8■■□□□ 1.56
SMCO4-201ENST00000298966 RNF20Q5VTR2 975 aa24.8■■□□□ 1.56
SMCO4-201ENST00000298966 TMEM179Q6ZVK1 233 aa24.8■■□□□ 1.56
SMCO4-201ENST00000298966 CRNKL1Q9BZJ0 848 aaKnown RBP24.8■■□□□ 1.56
SMCO4-201ENST00000298966 TMEM39AQ9NV64 488 aa24.8■■□□□ 1.56
SMCO4-201ENST00000298966 MYH8P13535 1937 aa24.8■■□□□ 1.56
SMCO4-201ENST00000298966 SLC25A27O95847 323 aa24.79■■□□□ 1.56
SMCO4-201ENST00000298966 DNAJB2P25686 324 aa24.79■■□□□ 1.56
SMCO4-201ENST00000298966 SAMD1Q6SPF0 538 aaPredicted RBP24.79■■□□□ 1.56
SMCO4-201ENST00000298966 SH2D4AQ9H788 454 aa24.79■■□□□ 1.56
SMCO4-201ENST00000298966 ARHGEF10LQ9HCE6 1279 aa24.79■■□□□ 1.56
SMCO4-201ENST00000298966 U3KPZ7 1027 aaPredicted RBP24.79■■□□□ 1.56
SMCO4-201ENST00000298966 A0A1W2PQ45 241 aaPredicted RBP24.78■■□□□ 1.56
SMCO4-201ENST00000298966 A0A1W2PQY0 241 aa24.78■■□□□ 1.56
SMCO4-201ENST00000298966 PGK1P00558 417 aa24.78■■□□□ 1.56
SMCO4-201ENST00000298966 BECN1Q14457 450 aa24.78■■□□□ 1.56
SMCO4-201ENST00000298966 KIAA1755Q5JYT7 1200 aa24.78■■□□□ 1.56
SMCO4-201ENST00000298966 MMP19Q99542 508 aa24.78■■□□□ 1.56
SMCO4-201ENST00000298966 KIF2CQ99661 725 aa24.78■■□□□ 1.56
SMCO4-201ENST00000298966 PLXNA1Q9UIW2 1896 aa24.78■■□□□ 1.56
SMCO4-201ENST00000298966 CDH23Q9H251 3354 aa24.78■■□□□ 1.56
SMCO4-201ENST00000298966 ZNF532Q9HCE3 1301 aa24.78■■□□□ 1.56
SMCO4-201ENST00000298966 MYO9BQ13459 2157 aa24.77■■□□□ 1.56
SMCO4-201ENST00000298966 TCRBV5S4A2TA0A5A2 114 aa24.77■■□□□ 1.56
SMCO4-201ENST00000298966 TNFRSF10AO00220 468 aa24.77■■□□□ 1.56
SMCO4-201ENST00000298966 USP38Q8NB14 1042 aa24.77■■□□□ 1.56
SMCO4-201ENST00000298966 KCNB2Q92953 911 aa24.77■■□□□ 1.56
SMCO4-201ENST00000298966 TINF2Q9BSI4 451 aa24.77■■□□□ 1.56
SMCO4-201ENST00000298966 SWAP70Q9UH65 585 aa24.77■■□□□ 1.56
SMCO4-201ENST00000298966 PARP14Q460N5 1801 aa24.77■■□□□ 1.56
SMCO4-201ENST00000298966 KCTD2Q14681 263 aa24.76■■□□□ 1.55
SMCO4-201ENST00000298966 ZNF589Q86UQ0 364 aaPredicted RBP24.76■■□□□ 1.55
SMCO4-201ENST00000298966 SPICE1Q8N0Z3 855 aa24.76■■□□□ 1.55
SMCO4-201ENST00000298966 OSBP2Q969R2 916 aa24.76■■□□□ 1.55
SMCO4-201ENST00000298966 ZNF576Q9H609 170 aa24.76■■□□□ 1.55
SMCO4-201ENST00000298966 TMX2Q9Y320 296 aa24.76■■□□□ 1.55
SMCO4-201ENST00000298966 COL11A1P12107 1806 aaPredicted RBP24.76■■□□□ 1.55
SMCO4-201ENST00000298966 DCDC2CA8MYV0 355 aa24.75■■□□□ 1.55
SMCO4-201ENST00000298966 WDR46O15213 610 aaKnown RBP24.75■■□□□ 1.55
SMCO4-201ENST00000298966 AKR1A1P14550 325 aa24.75■■□□□ 1.55
SMCO4-201ENST00000298966 GNAT2P19087 354 aa24.75■■□□□ 1.55
SMCO4-201ENST00000298966 COL9A1P20849 921 aa24.75■■□□□ 1.55
SMCO4-201ENST00000298966 EVX2Q03828 476 aa24.75■■□□□ 1.55
SMCO4-201ENST00000298966 TMEM132BQ14DG7 1078 aa24.75■■□□□ 1.55
SMCO4-201ENST00000298966 SLC44A5Q8NCS7 719 aa24.75■■□□□ 1.55
SMCO4-201ENST00000298966 TIFAQ96CG3 184 aa24.75■■□□□ 1.55
SMCO4-201ENST00000298966 TOX2Q96NM4 488 aa24.75■■□□□ 1.55
SMCO4-201ENST00000298966 VCPKMTQ9H867 229 aa24.75■■□□□ 1.55
SMCO4-201ENST00000298966 CTNNA3Q9UI47 895 aa24.75■■□□□ 1.55
SMCO4-201ENST00000298966 DIS3Q9Y2L1 958 aaKnown RBP24.75■■□□□ 1.55
SMCO4-201ENST00000298966 ROBO3Q96MS0 1386 aa24.75■■□□□ 1.55
SMCO4-201ENST00000298966 PGK2P07205 417 aa24.74■■□□□ 1.55
SMCO4-201ENST00000298966 PTH1RQ03431 593 aa24.74■■□□□ 1.55
SMCO4-201ENST00000298966 ICA1Q05084 483 aa24.74■■□□□ 1.55
SMCO4-201ENST00000298966 NECTIN1Q15223 517 aa24.74■■□□□ 1.55
SMCO4-201ENST00000298966 ANKRD33Q7Z3H0 272 aa24.74■■□□□ 1.55
SMCO4-201ENST00000298966 SEC62Q99442 399 aaKnown RBP24.74■■□□□ 1.55
SMCO4-201ENST00000298966 TSEN34Q9BSV6 310 aaKnown RBP24.74■■□□□ 1.55
SMCO4-201ENST00000298966 STARD7Q9NQZ5 370 aa24.74■■□□□ 1.55
SMCO4-201ENST00000298966 RBM8AQ9Y5S9 174 aaKnown RBP24.74■■□□□ 1.55
SMCO4-201ENST00000298966 GPAA1O43292 621 aa24.73■■□□□ 1.55
SMCO4-201ENST00000298966 TAL1P17542 331 aaPredicted RBP24.73■■□□□ 1.55
SMCO4-201ENST00000298966 FAAP100Q0VG06 881 aa24.73■■□□□ 1.55
SMCO4-201ENST00000298966 RIOX2Q8IUF8 465 aa24.73■■□□□ 1.55
SMCO4-201ENST00000298966 NUP133Q8WUM0 1156 aa24.73■■□□□ 1.55
SMCO4-201ENST00000298966 SNX21Q969T3 373 aa24.73■■□□□ 1.55
SMCO4-201ENST00000298966 GAS2L1Q99501 681 aaPredicted RBP24.73■■□□□ 1.55
SMCO4-201ENST00000298966 CNPY2Q9Y2B0 182 aa24.73■■□□□ 1.55
SMCO4-201ENST00000298966 NCOR1O75376 2440 aa24.73■■□□□ 1.55
SMCO4-201ENST00000298966 ZMYM6O95789 1325 aa24.72■■□□□ 1.55
SMCO4-201ENST00000298966 M0R2C6 588 aa24.72■■□□□ 1.55
SMCO4-201ENST00000298966 ZNF865P0CJ78 1059 aaPredicted RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms