RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 CASP7P55210 303 aa15.07■□□□□ 0
SKA3-201ENST00000298260 SATB1Q01826 763 aa15.07■□□□□ 0
SKA3-201ENST00000298260 CHADLQ6NUI6 762 aa15.07■□□□□ 0
SKA3-201ENST00000298260 AMOTL1Q8IY63 956 aa15.07■□□□□ 0
SKA3-201ENST00000298260 MTRQ99707 1265 aa15.07■□□□□ 0
SKA3-201ENST00000298260 HAUS2Q9NVX0 235 aa15.07■□□□□ 0
SKA3-201ENST00000298260 LRWD1Q9UFC0 647 aa15.07■□□□□ 0
SKA3-201ENST00000298260 SLC12A7Q9Y666 1083 aa15.07■□□□□ 0
SKA3-201ENST00000298260 OVOS2A0A0G2JMS6 1433 aa15.07■□□□□ 0
SKA3-201ENST00000298260 XDHP47989 1333 aa15.07■□□□□ 0
SKA3-201ENST00000298260 IFIT3O14879 490 aaKnown RBP15.07■□□□□ 0
SKA3-201ENST00000298260 ERCC3P19447 782 aa15.07■□□□□ 0
SKA3-201ENST00000298260 CARSP49589 748 aaKnown RBP15.07■□□□□ 0
SKA3-201ENST00000298260 DDR1Q08345 913 aa15.07■□□□□ 0
SKA3-201ENST00000298260 PREPLQ4J6C6 727 aaPredicted RBP15.07■□□□□ 0
SKA3-201ENST00000298260 LRCH2Q5VUJ6 765 aa15.07■□□□□ 0
SKA3-201ENST00000298260 IRF2BP1Q8IU81 584 aa15.07■□□□□ 0
SKA3-201ENST00000298260 PROCA1Q8NCQ7 364 aaPredicted RBP15.07■□□□□ 0
SKA3-201ENST00000298260 SPATA4Q8NEY3 305 aa15.07■□□□□ 0
SKA3-201ENST00000298260 ZSWIM5Q9P217 1185 aa15.07■□□□□ 0
SKA3-201ENST00000298260 NFU1Q9UMS0 254 aa15.07■□□□□ 0
SKA3-201ENST00000298260 BAZ2BQ9UIF8 2168 aaKnown RBP15.07■□□□□ 0
SKA3-201ENST00000298260 ITIH6Q6UXX5 1313 aa15.07■□□□□ 0
SKA3-201ENST00000298260 HSF2BPO75031 334 aa15.07■□□□□ 0
SKA3-201ENST00000298260 MOCS3O95396 460 aa15.07■□□□□ 0
SKA3-201ENST00000298260 CKAP4Q07065 602 aaKnown RBP15.07■□□□□ 0
SKA3-201ENST00000298260 LIMA1Q9UHB6 759 aaKnown RBP15.07■□□□□ 0
SKA3-201ENST00000298260 DNM1LO00429 736 aa15.06■□□□□ 0
SKA3-201ENST00000298260 ZNF263O14978 683 aa15.06■□□□□ 0
SKA3-201ENST00000298260 IDH1O75874 414 aaKnown RBP15.06■□□□□ 0
SKA3-201ENST00000298260 MYCBPAPQ8TBZ2 947 aa15.06■□□□□ 0
SKA3-201ENST00000298260 APPBP2Q92624 585 aa15.06■□□□□ 0
SKA3-201ENST00000298260 CCDC114Q96M63 670 aa15.06■□□□□ 0
SKA3-201ENST00000298260 EYA2O00167 538 aa15.06■□□□□ 0
SKA3-201ENST00000298260 KRT86O43790 486 aa15.06■□□□□ 0
SKA3-201ENST00000298260 OPA1O60313 960 aa15.06■□□□□ 0
SKA3-201ENST00000298260 RASSF9O75901 435 aa15.06■□□□□ 0
SKA3-201ENST00000298260 RILPL1Q5EBL4 403 aa15.06■□□□□ 0
SKA3-201ENST00000298260 TBC1D31Q96DN5 1066 aa15.06■□□□□ 0
SKA3-201ENST00000298260 EPN3Q9H201 632 aa15.06■□□□□ 0
SKA3-201ENST00000298260 VCPKMTQ9H867 229 aa15.06■□□□□ 0
SKA3-201ENST00000298260 RBM12Q9NTZ6 932 aaKnown RBP15.06■□□□□ 0
SKA3-201ENST00000298260 B4DLN1 442 aa15.05■□□□□ 0
SKA3-201ENST00000298260 PATL2C9JE40 543 aaKnown RBP15.05■□□□□ 0
SKA3-201ENST00000298260 C21orf2O43822 256 aa15.05■□□□□ 0
SKA3-201ENST00000298260 GLI1P08151 1106 aa15.05■□□□□ 0
SKA3-201ENST00000298260 CLNS1AP54105 237 aaKnown RBP15.05■□□□□ 0
SKA3-201ENST00000298260 SKOR1P84550 965 aa15.05■□□□□ 0
SKA3-201ENST00000298260 CCDC96Q2M329 555 aa15.05■□□□□ 0
SKA3-201ENST00000298260 HAUS3Q68CZ6 603 aa15.05■□□□□ 0
SKA3-201ENST00000298260 LRP10Q7Z4F1 713 aa15.05■□□□□ 0
SKA3-201ENST00000298260 NLRP14Q86W24 1093 aa15.05■□□□□ 0
SKA3-201ENST00000298260 OR2W6PQ8NHA6 318 aa15.05■□□□□ 0
SKA3-201ENST00000298260 PLIN2Q99541 437 aa15.05■□□□□ 0
SKA3-201ENST00000298260 NHEJ1Q9H9Q4 299 aaPredicted RBP15.05■□□□□ 0
SKA3-201ENST00000298260 ECM29Q5VYK3 1845 aa15.05■□□□□ -0
SKA3-201ENST00000298260 SMIM22K7EJ46 135 aa15.05■□□□□ -0
SKA3-201ENST00000298260 FMNL1O95466 1100 aaPredicted RBP15.05■□□□□ -0
SKA3-201ENST00000298260 IL15P40933 162 aaPredicted RBP15.05■□□□□ -0
SKA3-201ENST00000298260 PRCPP42785 496 aa15.05■□□□□ -0
SKA3-201ENST00000298260 PAK1Q13153 545 aa15.05■□□□□ -0
SKA3-201ENST00000298260 PTGISQ16647 500 aa15.05■□□□□ -0
SKA3-201ENST00000298260 ACCSLQ4AC99 568 aa15.05■□□□□ -0
SKA3-201ENST00000298260 KANK3Q6NY19 840 aa15.05■□□□□ -0
SKA3-201ENST00000298260 ZBTB3Q9H5J0 574 aa15.05■□□□□ -0
SKA3-201ENST00000298260 PARP1P09874 1014 aaKnown RBP15.04■□□□□ -0
SKA3-201ENST00000298260 QPCTQ16769 361 aa15.04■□□□□ -0
SKA3-201ENST00000298260 TTLL7Q6ZT98 887 aa15.04■□□□□ -0
SKA3-201ENST00000298260 SH3RF1Q7Z6J0 888 aa15.04■□□□□ -0
SKA3-201ENST00000298260 PCMTD1Q96MG8 357 aaPredicted RBP15.04■□□□□ -0
SKA3-201ENST00000298260 PPP1R37O75864 691 aa15.04■□□□□ -0
SKA3-201ENST00000298260 NR1D1P20393 614 aa15.04■□□□□ -0
SKA3-201ENST00000298260 TMOD1P28289 359 aa15.04■□□□□ -0
SKA3-201ENST00000298260 TCIRG1Q13488 830 aa15.04■□□□□ -0
SKA3-201ENST00000298260 NAA25Q14CX7 972 aa15.04■□□□□ -0
SKA3-201ENST00000298260 ELOA2Q8IYF1 753 aaPredicted RBP15.04■□□□□ -0
SKA3-201ENST00000298260 MB21D1Q8N884 522 aa15.04■□□□□ -0
SKA3-201ENST00000298260 SGSM3Q96HU1 749 aa15.04■□□□□ -0
SKA3-201ENST00000298260 CEP126Q9P2H0 1117 aa15.04■□□□□ -0
SKA3-201ENST00000298260 TPX2Q9ULW0 747 aaKnown RBP15.04■□□□□ -0
SKA3-201ENST00000298260 LRRC10BA6NIK2 292 aa15.03■□□□□ -0
SKA3-201ENST00000298260 SMTNP53814 917 aa15.03■□□□□ -0
SKA3-201ENST00000298260 TSR1Q2NL82 804 aaKnown RBP15.03■□□□□ -0
SKA3-201ENST00000298260 GSDMAQ96QA5 445 aa15.03■□□□□ -0
SKA3-201ENST00000298260 OSBPL7Q9BZF2 842 aa15.03■□□□□ -0
SKA3-201ENST00000298260 A1CFQ9NQ94 594 aaKnown RBP15.03■□□□□ -0
SKA3-201ENST00000298260 STIM2Q9P246 746 aa15.03■□□□□ -0
SKA3-201ENST00000298260 SNX12Q9UMY4 172 aa15.03■□□□□ -0
SKA3-201ENST00000298260 RASSF10A6NK89 507 aa15.03■□□□□ -0
SKA3-201ENST00000298260 CSB-PGBD3P0DP91 1061 aa15.03■□□□□ -0
SKA3-201ENST00000298260 TRIM21P19474 475 aaKnown RBP15.03■□□□□ -0
SKA3-201ENST00000298260 BRD2P25440 801 aaKnown RBP15.03■□□□□ -0
SKA3-201ENST00000298260 CDR1P51861 262 aa15.03■□□□□ -0
SKA3-201ENST00000298260 CCNHP51946 323 aaPredicted RBP15.03■□□□□ -0
SKA3-201ENST00000298260 CYB5D1Q6P9G0 228 aa15.03■□□□□ -0
SKA3-201ENST00000298260 NLRP2Q9NX02 1062 aa15.03■□□□□ -0
SKA3-201ENST00000298260 SALL4Q9UJQ4 1053 aa15.03■□□□□ -0
SKA3-201ENST00000298260 MYO5AQ9Y4I1 1855 aaKnown RBP15.03■□□□□ -0
SKA3-201ENST00000298260 EPHB4P54760 987 aa15.02■□□□□ -0
SKA3-201ENST00000298260 GUCY2DQ02846 1103 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms