RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CCDC39Q9UFE4 941 aa24.45■■□□□ 1.5
SOX17-201ENST00000297316 STXBP3O00186 592 aa24.44■■□□□ 1.5
SOX17-201ENST00000297316 FAM151AQ8WW52 585 aa24.44■■□□□ 1.5
SOX17-201ENST00000297316 ZBED3Q96IU2 234 aaPredicted RBP24.44■■□□□ 1.5
SOX17-201ENST00000297316 KIAA1468Q9P260 1216 aa24.44■■□□□ 1.5
SOX17-201ENST00000297316 NOL7Q9UMY1 257 aaKnown RBP24.44■■□□□ 1.5
SOX17-201ENST00000297316 PTPREP23469 700 aa24.44■■□□□ 1.5
SOX17-201ENST00000297316 ABCB5Q2M3G0 1257 aa24.44■■□□□ 1.5
SOX17-201ENST00000297316 PIK3AP1Q6ZUJ8 805 aa24.44■■□□□ 1.5
SOX17-201ENST00000297316 KCTD1Q719H9 257 aa24.44■■□□□ 1.5
SOX17-201ENST00000297316 MTMR14Q8NCE2 650 aa24.44■■□□□ 1.5
SOX17-201ENST00000297316 GJA3Q9Y6H8 435 aa24.44■■□□□ 1.5
SOX17-201ENST00000297316 COL2A1P02458 1487 aaPredicted RBP24.43■■□□□ 1.5
SOX17-201ENST00000297316 GH2P01242 217 aa24.43■■□□□ 1.5
SOX17-201ENST00000297316 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.43■■□□□ 1.5
SOX17-201ENST00000297316 BARHL2Q9NY43 387 aa24.43■■□□□ 1.5
SOX17-201ENST00000297316 PTMAP06454 111 aaKnown RBP24.43■■□□□ 1.5
SOX17-201ENST00000297316 SLC16A2P36021 539 aa24.43■■□□□ 1.5
SOX17-201ENST00000297316 ZNF543Q08ER8 600 aa24.43■■□□□ 1.5
SOX17-201ENST00000297316 TNIP1Q15025 636 aa24.43■■□□□ 1.5
SOX17-201ENST00000297316 BLIDQ8IZY5 108 aa24.42■■□□□ 1.5
SOX17-201ENST00000297316 RRP36Q96EU6 259 aaKnown RBP24.42■■□□□ 1.5
SOX17-201ENST00000297316 RIOX1Q9H6W3 641 aa24.42■■□□□ 1.5
SOX17-201ENST00000297316 SH3GLB2Q9NR46 395 aa24.42■■□□□ 1.5
SOX17-201ENST00000297316 ICA1Q05084 483 aa24.41■■□□□ 1.5
SOX17-201ENST00000297316 ASPRV1Q53RT3 343 aa24.41■■□□□ 1.5
SOX17-201ENST00000297316 MIGA2Q7L4E1 593 aa24.41■■□□□ 1.5
SOX17-201ENST00000297316 KANSL2Q9H9L4 492 aa24.41■■□□□ 1.5
SOX17-201ENST00000297316 LTBP3Q9NS15 1303 aa24.41■■□□□ 1.5
SOX17-201ENST00000297316 GMPSP49915 693 aaPredicted RBP24.41■■□□□ 1.5
SOX17-201ENST00000297316 CCDC96Q2M329 555 aa24.41■■□□□ 1.5
SOX17-201ENST00000297316 TMEM179Q6ZVK1 233 aa24.41■■□□□ 1.5
SOX17-201ENST00000297316 ANO10Q9NW15 660 aa24.41■■□□□ 1.5
SOX17-201ENST00000297316 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.41■■□□□ 1.5
SOX17-201ENST00000297316 PCDHA4Q9UN74 947 aa24.41■■□□□ 1.5
SOX17-201ENST00000297316 ASTN2O75129 1339 aaPredicted RBP24.41■■□□□ 1.5
SOX17-201ENST00000297316 ZNF174Q15697 407 aa24.4■■□□□ 1.5
SOX17-201ENST00000297316 LONRF3Q496Y0 759 aa24.4■■□□□ 1.5
SOX17-201ENST00000297316 SAMD7Q7Z3H4 446 aa24.4■■□□□ 1.5
SOX17-201ENST00000297316 TIGD1Q96MW7 591 aa24.4■■□□□ 1.5
SOX17-201ENST00000297316 KCNH3Q9ULD8 1083 aa24.4■■□□□ 1.5
SOX17-201ENST00000297316 TRIM75PA6NK02 468 aa24.4■■□□□ 1.5
SOX17-201ENST00000297316 BIN1O00499 593 aa24.4■■□□□ 1.5
SOX17-201ENST00000297316 DPCR1Q3MIW9 517 aa24.4■■□□□ 1.5
SOX17-201ENST00000297316 DHX40Q8IX18 779 aaKnown RBP24.4■■□□□ 1.5
SOX17-201ENST00000297316 NYAP2Q9P242 653 aa24.4■■□□□ 1.5
SOX17-201ENST00000297316 ZKSCAN5Q9Y2L8 839 aa24.4■■□□□ 1.5
SOX17-201ENST00000297316 ZNF541Q9H0D2 1346 aa24.4■■□□□ 1.5
SOX17-201ENST00000297316 NAPAP54920 295 aa24.39■■□□□ 1.5
SOX17-201ENST00000297316 USP49Q70CQ1 688 aa24.39■■□□□ 1.5
SOX17-201ENST00000297316 SEC63Q9UGP8 760 aaKnown RBP24.39■■□□□ 1.5
SOX17-201ENST00000297316 SRPRBQ9Y5M8 271 aaKnown RBP24.39■■□□□ 1.5
SOX17-201ENST00000297316 M0R2N6 131 aa24.39■■□□□ 1.49
SOX17-201ENST00000297316 FZD9O00144 591 aa24.39■■□□□ 1.49
SOX17-201ENST00000297316 MYO1BO43795 1136 aa24.39■■□□□ 1.49
SOX17-201ENST00000297316 CAVIN2O95810 425 aa24.39■■□□□ 1.49
SOX17-201ENST00000297316 CALML3P27482 149 aa24.39■■□□□ 1.49
SOX17-201ENST00000297316 MICALL2Q8IY33 904 aa24.39■■□□□ 1.49
SOX17-201ENST00000297316 ADGRF4Q8IZF3 695 aa24.39■■□□□ 1.49
SOX17-201ENST00000297316 MKL1Q969V6 931 aa24.39■■□□□ 1.49
SOX17-201ENST00000297316 SMARCA1P28370 1054 aa24.38■■□□□ 1.49
SOX17-201ENST00000297316 ZNF830Q96NB3 372 aaPredicted RBP24.38■■□□□ 1.49
SOX17-201ENST00000297316 JMJD4Q9H9V9 463 aa24.38■■□□□ 1.49
SOX17-201ENST00000297316 SPON1Q9HCB6 807 aa24.38■■□□□ 1.49
SOX17-201ENST00000297316 HERC5Q9UII4 1024 aaKnown RBP24.38■■□□□ 1.49
SOX17-201ENST00000297316 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.38■■□□□ 1.49
SOX17-201ENST00000297316 ZNF280AP59817 542 aaPredicted RBP24.38■■□□□ 1.49
SOX17-201ENST00000297316 PNOCQ13519 176 aa24.38■■□□□ 1.49
SOX17-201ENST00000297316 TBC1D10BQ4KMP7 808 aaPredicted RBP24.38■■□□□ 1.49
SOX17-201ENST00000297316 TTC38Q5R3I4 469 aa24.38■■□□□ 1.49
SOX17-201ENST00000297316 COA7Q96BR5 231 aa24.38■■□□□ 1.49
SOX17-201ENST00000297316 NUP88Q99567 741 aaPredicted RBP24.38■■□□□ 1.49
SOX17-201ENST00000297316 CSRNP2Q9H175 543 aa24.38■■□□□ 1.49
SOX17-201ENST00000297316 PGAP2Q9UHJ9 254 aa24.38■■□□□ 1.49
SOX17-201ENST00000297316 PCDHA6Q9UN73 950 aa24.38■■□□□ 1.49
SOX17-201ENST00000297316 CEP131Q9UPN4 1083 aa24.38■■□□□ 1.49
SOX17-201ENST00000297316 PCDHA8Q9Y5H6 950 aa24.38■■□□□ 1.49
SOX17-201ENST00000297316 A0A1W2PRG0 241 aa24.37■■□□□ 1.49
SOX17-201ENST00000297316 FOXN1O15353 648 aa24.37■■□□□ 1.49
SOX17-201ENST00000297316 MSNP26038 577 aaKnown RBP24.37■■□□□ 1.49
SOX17-201ENST00000297316 SLFN13Q68D06 897 aa24.37■■□□□ 1.49
SOX17-201ENST00000297316 CCDC148Q8NFR7 591 aa24.37■■□□□ 1.49
SOX17-201ENST00000297316 FHDC1Q9C0D6 1143 aaPredicted RBP24.37■■□□□ 1.49
SOX17-201ENST00000297316 FKBP1CQ5VVH2 108 aa24.36■■□□□ 1.49
SOX17-201ENST00000297316 KRBA2Q6ZNG9 492 aa24.36■■□□□ 1.49
SOX17-201ENST00000297316 SPC24Q8NBT2 197 aa24.36■■□□□ 1.49
SOX17-201ENST00000297316 USP17L10C9JJH3 530 aa24.36■■□□□ 1.49
SOX17-201ENST00000297316 PPP1R11O60927 126 aaPredicted RBP24.36■■□□□ 1.49
SOX17-201ENST00000297316 ISM2Q6H9L7 571 aa24.36■■□□□ 1.49
SOX17-201ENST00000297316 ZMYND12Q9H0C1 365 aa24.36■■□□□ 1.49
SOX17-201ENST00000297316 CNOT7Q9UIV1 285 aaKnown RBP24.36■■□□□ 1.49
SOX17-201ENST00000297316 SMCO2A6NFE2 343 aa24.35■■□□□ 1.49
SOX17-201ENST00000297316 SLC1A4P43007 532 aa24.35■■□□□ 1.49
SOX17-201ENST00000297316 ARHGAP27Q6ZUM4 889 aa24.35■■□□□ 1.49
SOX17-201ENST00000297316 FAM83AQ86UY5 434 aa24.35■■□□□ 1.49
SOX17-201ENST00000297316 CEP57L1Q8IYX8 460 aa24.35■■□□□ 1.49
SOX17-201ENST00000297316 ZNF579Q8NAF0 562 aaKnown RBP24.35■■□□□ 1.49
SOX17-201ENST00000297316 F5H6K3 240 aa24.35■■□□□ 1.49
SOX17-201ENST00000297316 ECE1P42892 770 aa24.35■■□□□ 1.49
SOX17-201ENST00000297316 KLRC3Q07444 240 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms