RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 NFE2L3Q9Y4A8 694 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 IGKV5-2P06315 115 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 NELFBQ8WX92 580 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 ATP6V0A1Q93050 837 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 LMTK2Q8IWU2 1503 aa19.64■□□□□ 0.74
CDC42EP3-201ENST00000295324 FERP16591 822 aa19.64■□□□□ 0.74
CDC42EP3-201ENST00000295324 TUBB4BP68371 445 aa19.64■□□□□ 0.74
CDC42EP3-201ENST00000295324 SLC9C1Q4G0N8 1177 aa19.64■□□□□ 0.74
CDC42EP3-201ENST00000295324 MIGA2Q7L4E1 593 aa19.64■□□□□ 0.74
CDC42EP3-201ENST00000295324 CSRNP2Q9H175 543 aa19.64■□□□□ 0.74
CDC42EP3-201ENST00000295324 SERTAD1Q9UHV2 236 aa19.64■□□□□ 0.74
CDC42EP3-201ENST00000295324 COL4A3BPQ9Y5P4 624 aa19.64■□□□□ 0.74
CDC42EP3-201ENST00000295324 SASH1O94885 1247 aa19.64■□□□□ 0.73
CDC42EP3-201ENST00000295324 GPR101Q96P66 508 aaPredicted RBP19.64■□□□□ 0.73
CDC42EP3-201ENST00000295324 A0A1W2PRG0 241 aa19.64■□□□□ 0.73
CDC42EP3-201ENST00000295324 MYOCDQ8IZQ8 938 aa19.64■□□□□ 0.73
CDC42EP3-201ENST00000295324 POLGP54098 1239 aaPredicted RBP19.64■□□□□ 0.73
CDC42EP3-201ENST00000295324 NOLC1Q14978 699 aaKnown RBP eCLIP19.64■□□□□ 0.73
CDC42EP3-201ENST00000295324 GIMAP7Q8NHV1 300 aa19.64■□□□□ 0.73
CDC42EP3-201ENST00000295324 KIAA1524Q8TCG1 905 aa19.64■□□□□ 0.73
CDC42EP3-201ENST00000295324 OSBP2Q969R2 916 aa19.64■□□□□ 0.73
CDC42EP3-201ENST00000295324 PUS7LQ9H0K6 701 aaKnown RBP19.64■□□□□ 0.73
CDC42EP3-201ENST00000295324 CD209Q9NNX6 404 aa19.64■□□□□ 0.73
CDC42EP3-201ENST00000295324 CCDC14Q49A88 953 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 BLZF1Q9H2G9 400 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 RIMBP3CA6NJZ7 1639 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 RIMBP3BA6NNM3 1639 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 RIMBP3Q9UFD9 1639 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 FAM178BQ8IXR5 827 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 PRIMPOLQ96LW4 560 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 TRAPPC10P48553 1259 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 ZNF569Q5MCW4 686 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 RSPH3Q86UC2 560 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 AGTPBP1Q9UPW5 1226 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 CRKP46108 304 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 KARSQ15046 597 aaKnown RBP19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 PIH1D3Q9NQM4 214 aaKnown RBP19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 YARSP54577 528 aaKnown RBP19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 FANCCQ00597 558 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 SYNE4Q8N205 404 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 TXNDC16Q9P2K2 825 aa19.63■□□□□ 0.73
CDC42EP3-201ENST00000295324 ECE2O60344 883 aa19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 SORBS3O60504 671 aa19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 GAS8O95995 478 aa19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 GCFC2P16383 781 aaKnown RBP19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 ARL1P40616 181 aaPredicted RBP19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 TNNC1P63316 161 aa19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 SYDE2Q5VT97 1194 aa19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 TMEM179Q6ZVK1 233 aa19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 FBXO18Q8NFZ0 1043 aa19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 NAP1L3Q99457 506 aaPredicted RBP19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 BRD1O95696 1058 aa19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 ATP2A2P16615 1042 aaKnown RBP19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 LAD1O00515 517 aa19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 LRCH2Q5VUJ6 765 aa19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 PPP1R9BQ96SB3 815 aa19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 LONP1P36776 959 aaKnown RBP19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 MAPK8IP2Q13387 824 aaPredicted RBP19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 NFIXQ14938 502 aa19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 RNF181Q9P0P0 153 aa19.62■□□□□ 0.73
CDC42EP3-201ENST00000295324 DAPK3O43293 454 aa19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 TFDP1Q14186 410 aa19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 ZNF589Q86UQ0 364 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 CELF1Q92879 486 aaKnown RBP19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 FAM193BQ96PV7 902 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 ISCA1Q9BUE6 129 aa19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 DTNBO60941 627 aa19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 CYP26C1Q6V0L0 522 aa19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 WDR11Q9BZH6 1224 aa19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 DMP1Q13316 513 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 PPP1R7Q15435 360 aa19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 RC3H1Q5TC82 1133 aaKnown RBP19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 DCUN1D2Q6PH85 259 aa19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 IQCDQ96DY2 449 aa19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 NUCKS1Q9H1E3 243 aaKnown RBP19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 PCDHA4Q9UN74 947 aa19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 CDK8P49336 464 aa19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 CALCOCO2Q13137 446 aa19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 RDH13Q8NBN7 331 aa19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 MTRF1LQ9UGC7 380 aaKnown RBP19.61■□□□□ 0.73
CDC42EP3-201ENST00000295324 K7ENM7 598 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 ZEB2O60315 1214 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 PPP2R5AQ15172 486 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 JAKMIP2Q96AA8 810 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 USP28Q96RU2 1077 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 TAB2Q9NYJ8 693 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 ATF7P17544 494 aaPredicted RBP19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 TNNC2P02585 160 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 TBC1D10BQ4KMP7 808 aaPredicted RBP19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 DYNLL2Q96FJ2 89 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 SPATA31A1Q5TZJ5 1347 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 XRCC5P13010 732 aaKnown RBP19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 PFKFB1P16118 471 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 SLC16A2P36021 539 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 PTGDRQ13258 359 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 TTC14Q96N46 770 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 ZNF577Q9BSK1 485 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 FAM169AQ9Y6X4 670 aa19.6■□□□□ 0.73
CDC42EP3-201ENST00000295324 LRRIQ4A6NIV6 560 aa19.59■□□□□ 0.73
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