RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 MAN1B1Q9UKM7 699 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 CHD4Q14839 1912 aa17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 hCG_1642624A0A1W2PR95 340 aa17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 ERICH2A1L162 156 aa17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 TEX33O43247 280 aa17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 PPP6R2O75170 966 aa17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 IARSP41252 1262 aaKnown RBP17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 CASP8Q14790 479 aa17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 SART3Q15020 963 aaKnown RBP17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 SEC23AQ15436 765 aa17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 ZNF569Q5MCW4 686 aa17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 LRRC31Q6UY01 552 aa17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 GRAMD1CQ8IYS0 662 aa17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 TGFBRAP1Q8WUH2 860 aa17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 SAP30BPQ9UHR5 308 aaKnown RBP17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 ADGRG1Q9Y653 693 aa17.27■□□□□ 0.36
LRRTM1-201ENST00000295057 MDM2Q00987 491 aaPredicted RBP17.27■□□□□ 0.35
LRRTM1-201ENST00000295057 DOK7Q18PE1 504 aa17.27■□□□□ 0.35
LRRTM1-201ENST00000295057 MFSD14BQ5SR56 506 aa17.27■□□□□ 0.35
LRRTM1-201ENST00000295057 KRT40Q6A162 431 aa17.27■□□□□ 0.35
LRRTM1-201ENST00000295057 ZNF654Q8IZM8 581 aa17.27■□□□□ 0.35
LRRTM1-201ENST00000295057 ZSCAN10Q96SZ4 725 aaPredicted RBP17.27■□□□□ 0.35
LRRTM1-201ENST00000295057 PDGFDQ9GZP0 370 aaPredicted RBP17.27■□□□□ 0.35
LRRTM1-201ENST00000295057 F8W031 263 aaPredicted RBP17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 MYO1BO43795 1136 aa17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 GTF2IP78347 998 aa17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 GRIN1Q05586 938 aa17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 RTN1Q16799 776 aa17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 MAPKAPK5Q8IW41 473 aa17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 ZNF622Q969S3 477 aaKnown RBP eCLIP17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 DRC1Q96MC2 740 aa17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 RGPD3A6NKT7 1758 aaPredicted RBP17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 RGPD4Q7Z3J3 1758 aa17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 FAM237AA0A1B0GTK4 181 aa17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 LRRIQ3A6PVS8 624 aaPredicted RBP17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 IL1R1P14778 569 aa17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 KIF4BQ2VIQ3 1234 aa17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 C15orf52Q6ZUT6 534 aaKnown RBP17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 CEP112Q8N8E3 955 aa17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
LRRTM1-201ENST00000295057 RPS6KA5O75582 802 aa17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 EIF3JO75822 258 aaKnown RBP17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 SKIDA1Q1XH10 827 aa17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 SP8Q8IXZ3 490 aa17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 JMYQ8N9B5 988 aa17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 SLC44A5Q8NCS7 719 aa17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 ATP8A2Q9NTI2 1148 aa17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 AKR1B15C9JRZ8 316 aaPredicted RBP17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 KIF5CO60282 957 aa17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 RBL2Q08999 1139 aa17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 NR1I3Q14994 352 aa17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 FANCBQ8NB91 859 aa17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 ANKRD31Q8N7Z5 1873 aa17.25■□□□□ 0.35
LRRTM1-201ENST00000295057 ERLIN1O75477 346 aa17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 ATP2B1P20020 1258 aa17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 BTDP43251 543 aa17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 SLC35F6Q8N357 371 aa17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 RTFDC1Q9BY42 306 aaPredicted RBP17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 FAM204AQ9H8W3 233 aa17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 MKRN1Q9UHC7 482 aaKnown RBP17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 KCNJ14Q9UNX9 436 aa17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 MYH2Q9UKX2 1941 aa17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 TNS1Q9HBL0 1735 aaKnown RBP17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 CLGNO14967 610 aa17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 CDKL5O76039 1030 aa17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 PLCD1P51178 756 aa17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 SSRP1Q08945 709 aaKnown RBP17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 IFIT1BQ5T764 474 aaKnown RBP17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 CPLX2Q6PUV4 134 aaKnown RBP17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 NOA1Q8NC60 698 aaKnown RBP17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 KCNQ5Q9NR82 932 aa17.24■□□□□ 0.35
LRRTM1-201ENST00000295057 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
LRRTM1-201ENST00000295057 FGRP09769 529 aa17.23■□□□□ 0.35
LRRTM1-201ENST00000295057 CHRNA5P30532 468 aa17.23■□□□□ 0.35
LRRTM1-201ENST00000295057 POSTNQ15063 836 aa17.23■□□□□ 0.35
LRRTM1-201ENST00000295057 NPR1P16066 1061 aa17.23■□□□□ 0.35
LRRTM1-201ENST00000295057 ACRBPQ8NEB7 543 aa17.23■□□□□ 0.35
LRRTM1-201ENST00000295057 ENOX1Q8TC92 643 aaKnown RBP17.23■□□□□ 0.35
LRRTM1-201ENST00000295057 DEF6Q9H4E7 631 aa17.23■□□□□ 0.35
LRRTM1-201ENST00000295057 SERTAD1Q9UHV2 236 aa17.23■□□□□ 0.35
LRRTM1-201ENST00000295057 PLEKHA8P1O95397 391 aa17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 FMNL1O95466 1100 aaPredicted RBP17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 HSP90B2PQ58FF3 399 aa17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 GPATCH11Q8N954 259 aa17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 PANX2Q96RD6 677 aa17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 CTAGE9A4FU28 777 aa17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 POTEB2H3BUK9 544 aa17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 POLR2DO15514 142 aaKnown RBP17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 IFNAR1P17181 557 aa17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 CORO7P57737 925 aa17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 C12orf60Q5U649 245 aa17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 DPP8Q6V1X1 898 aaPredicted RBP17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 CRACR2BQ8N4Y2 399 aaPredicted RBP17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 IGSF22Q8N9C0 903 aa17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 FAM71BQ8TC56 605 aa17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 ARPP21Q9UBL0 812 aaPredicted RBP17.22■□□□□ 0.35
LRRTM1-201ENST00000295057 A0A1B0GTH6 734 aa17.21■□□□□ 0.35
LRRTM1-201ENST00000295057 IQCA1Q86XH1 822 aa17.21■□□□□ 0.35
LRRTM1-201ENST00000295057 CERS5Q8N5B7 392 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms