RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 ZIC5Q96T25 663 aa18.48■□□□□ 0.55
MRPL55-201ENST00000295008 LZTS2Q9BRK4 669 aa18.48■□□□□ 0.55
MRPL55-201ENST00000295008 RLFQ13129 1914 aa18.48■□□□□ 0.55
MRPL55-201ENST00000295008 A0A0G2JMZ2 1700 aa18.48■□□□□ 0.55
MRPL55-201ENST00000295008 CPLX1O14810 134 aa18.47■□□□□ 0.55
MRPL55-201ENST00000295008 DHX16O60231 1041 aaKnown RBP18.47■□□□□ 0.55
MRPL55-201ENST00000295008 PLA2G6O60733 806 aa18.47■□□□□ 0.55
MRPL55-201ENST00000295008 HOXA7P31268 230 aaPredicted RBP18.47■□□□□ 0.55
MRPL55-201ENST00000295008 KIF23Q02241 960 aaPredicted RBP18.47■□□□□ 0.55
MRPL55-201ENST00000295008 FUT2Q10981 343 aa18.47■□□□□ 0.55
MRPL55-201ENST00000295008 NOGQ13253 232 aa18.47■□□□□ 0.55
MRPL55-201ENST00000295008 PABPC4Q13310 644 aaKnown RBP eCLIP18.47■□□□□ 0.554e-7■■■■□ 25.7
MRPL55-201ENST00000295008 CUL4AQ13619 759 aa18.47■□□□□ 0.55
MRPL55-201ENST00000295008 NTRK3Q16288 839 aa18.47■□□□□ 0.55
MRPL55-201ENST00000295008 SYDE2Q5VT97 1194 aa18.47■□□□□ 0.55
MRPL55-201ENST00000295008 SAMD1Q6SPF0 538 aaPredicted RBP18.47■□□□□ 0.55
MRPL55-201ENST00000295008 CCDC82Q8N4S0 544 aa18.47■□□□□ 0.55
MRPL55-201ENST00000295008 PTPN18Q99952 460 aa18.47■□□□□ 0.55
MRPL55-201ENST00000295008 SLF1Q9BQI6 1058 aa18.47■□□□□ 0.55
MRPL55-201ENST00000295008 SPZ1Q9BXG8 430 aa18.47■□□□□ 0.55
MRPL55-201ENST00000295008 WDR33Q9C0J8 1336 aaKnown RBP18.47■□□□□ 0.55
MRPL55-201ENST00000295008 CYTH3O43739 400 aa18.46■□□□□ 0.55
MRPL55-201ENST00000295008 DTNBO60941 627 aa18.46■□□□□ 0.55
MRPL55-201ENST00000295008 PPFIA3O75145 1194 aa18.46■□□□□ 0.55
MRPL55-201ENST00000295008 CTDNEP1O95476 244 aa18.46■□□□□ 0.55
MRPL55-201ENST00000295008 IFNAR1P17181 557 aa18.46■□□□□ 0.55
MRPL55-201ENST00000295008 IRX3P78415 501 aaPredicted RBP18.46■□□□□ 0.55
MRPL55-201ENST00000295008 SREBF2Q12772 1141 aa18.46■□□□□ 0.55
MRPL55-201ENST00000295008 BECN1Q14457 450 aa18.46■□□□□ 0.55
MRPL55-201ENST00000295008 CPLX2Q6PUV4 134 aaKnown RBP18.46■□□□□ 0.55
MRPL55-201ENST00000295008 FAM43AQ8N2R8 423 aa18.46■□□□□ 0.55
MRPL55-201ENST00000295008 CHURC1Q8WUH1 139 aa18.46■□□□□ 0.55
MRPL55-201ENST00000295008 KIFC2Q96AC6 838 aa18.46■□□□□ 0.55
MRPL55-201ENST00000295008 ASCC2Q9H1I8 757 aaPredicted RBP18.46■□□□□ 0.55
MRPL55-201ENST00000295008 PPP1R9AQ9ULJ8 1098 aa18.46■□□□□ 0.55
MRPL55-201ENST00000295008 PRR12Q9ULL5 1215 aa18.46■□□□□ 0.55
MRPL55-201ENST00000295008 SLC45A1Q9Y2W3 748 aa18.46■□□□□ 0.55
MRPL55-201ENST00000295008 PDHXO00330 501 aa18.45■□□□□ 0.54
MRPL55-201ENST00000295008 IGF2BP3O00425 579 aaKnown RBP eCLIP18.45■□□□□ 0.54
MRPL55-201ENST00000295008 CDKL5O76039 1030 aa18.45■□□□□ 0.54
MRPL55-201ENST00000295008 VEGFBP49765 207 aa18.45■□□□□ 0.54
MRPL55-201ENST00000295008 ADGRF4Q8IZF3 695 aa18.45■□□□□ 0.54
MRPL55-201ENST00000295008 NSUN7Q8NE18 718 aaKnown RBP18.45■□□□□ 0.54
MRPL55-201ENST00000295008 PHKBQ93100 1093 aa18.45■□□□□ 0.54
MRPL55-201ENST00000295008 ATG4CQ96DT6 458 aa18.45■□□□□ 0.54
MRPL55-201ENST00000295008 RIOX1Q9H6W3 641 aa18.45■□□□□ 0.54
MRPL55-201ENST00000295008 MYPNQ86TC9 1320 aa18.45■□□□□ 0.54
MRPL55-201ENST00000295008 PTPDC1A2A3K4 754 aa18.44■□□□□ 0.54
MRPL55-201ENST00000295008 SPDYE16A6NNV3 312 aaPredicted RBP18.44■□□□□ 0.54
MRPL55-201ENST00000295008 JAK2O60674 1132 aa18.44■□□□□ 0.54
MRPL55-201ENST00000295008 OSBPP22059 807 aa18.44■□□□□ 0.54
MRPL55-201ENST00000295008 SMARCA1P28370 1054 aa18.44■□□□□ 0.54
MRPL55-201ENST00000295008 DSG3P32926 999 aa18.44■□□□□ 0.54
MRPL55-201ENST00000295008 INHBEP58166 350 aa18.44■□□□□ 0.54
MRPL55-201ENST00000295008 COG2Q14746 738 aa18.44■□□□□ 0.54
MRPL55-201ENST00000295008 IFNL1Q8IU54 200 aa18.44■□□□□ 0.54
MRPL55-201ENST00000295008 PRPF38AQ8NAV1 312 aaKnown RBP18.44■□□□□ 0.54
MRPL55-201ENST00000295008 PIBF1Q8WXW3 757 aa18.44■□□□□ 0.54
MRPL55-201ENST00000295008 SLC26A6Q9BXS9 759 aa18.44■□□□□ 0.54
MRPL55-201ENST00000295008 JMJD4Q9H9V9 463 aa18.44■□□□□ 0.54
MRPL55-201ENST00000295008 VAT1LQ9HCJ6 419 aa18.44■□□□□ 0.54
MRPL55-201ENST00000295008 PNMA3Q9UL41 463 aa18.44■□□□□ 0.54
MRPL55-201ENST00000295008 FMNL1O95466 1100 aaPredicted RBP18.43■□□□□ 0.54
MRPL55-201ENST00000295008 TM4SF4P48230 202 aa18.43■□□□□ 0.54
MRPL55-201ENST00000295008 SNAP25P60880 206 aa18.43■□□□□ 0.54
MRPL55-201ENST00000295008 HOMER1Q86YM7 354 aa18.43■□□□□ 0.54
MRPL55-201ENST00000295008 P2RX7Q99572 595 aaKnown RBP18.43■□□□□ 0.54
MRPL55-201ENST00000295008 LLPHQ9BRT6 129 aaKnown RBP18.43■□□□□ 0.54
MRPL55-201ENST00000295008 RNF26Q9BY78 433 aaPredicted RBP18.43■□□□□ 0.54
MRPL55-201ENST00000295008 RANBP17Q9H2T7 1088 aaKnown RBP18.43■□□□□ 0.54
MRPL55-201ENST00000295008 STK36Q9NRP7 1315 aa18.43■□□□□ 0.54
MRPL55-201ENST00000295008 hCG_1642624A0A1W2PR95 340 aa18.42■□□□□ 0.54
MRPL55-201ENST00000295008 CYP2C8P10632 490 aa18.42■□□□□ 0.54
MRPL55-201ENST00000295008 HERVK_113P62684 666 aa18.42■□□□□ 0.54
MRPL55-201ENST00000295008 SSRP1Q08945 709 aaKnown RBP18.42■□□□□ 0.54
MRPL55-201ENST00000295008 CDC37Q16543 378 aaPredicted RBP18.42■□□□□ 0.54
MRPL55-201ENST00000295008 TRIM22Q8IYM9 498 aa18.42■□□□□ 0.54
MRPL55-201ENST00000295008 SMARCC2Q8TAQ2 1214 aa18.42■□□□□ 0.54
MRPL55-201ENST00000295008 MTMR8Q96EF0 704 aa18.42■□□□□ 0.54
MRPL55-201ENST00000295008 RRP36Q96EU6 259 aaKnown RBP18.42■□□□□ 0.54
MRPL55-201ENST00000295008 PIGSQ96S52 555 aa18.42■□□□□ 0.54
MRPL55-201ENST00000295008 ZCCHC17Q9NP64 241 aaKnown RBP18.42■□□□□ 0.54
MRPL55-201ENST00000295008 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
MRPL55-201ENST00000295008 HOXC10Q9NYD6 342 aa18.42■□□□□ 0.54
MRPL55-201ENST00000295008 COL11A1P12107 1806 aaPredicted RBP18.42■□□□□ 0.54
MRPL55-201ENST00000295008 VWA5AO00534 786 aa18.41■□□□□ 0.54
MRPL55-201ENST00000295008 PRPF3O43395 683 aaKnown RBP18.41■□□□□ 0.54
MRPL55-201ENST00000295008 QRICH1Q2TAL8 776 aa18.41■□□□□ 0.54
MRPL55-201ENST00000295008 DDX11Q96FC9 970 aa18.41■□□□□ 0.54
MRPL55-201ENST00000295008 PARK7Q99497 189 aaKnown RBP18.41■□□□□ 0.54
MRPL55-201ENST00000295008 SLC38A10Q9HBR0 1119 aa18.41■□□□□ 0.54
MRPL55-201ENST00000295008 ADAMTS5Q9UNA0 930 aa18.41■□□□□ 0.54
MRPL55-201ENST00000295008 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.41■□□□□ 0.54
MRPL55-201ENST00000295008 V9GY48 417 aaPredicted RBP18.41■□□□□ 0.54
MRPL55-201ENST00000295008 ZBTB5O15062 677 aa18.4■□□□□ 0.54
MRPL55-201ENST00000295008 ZBED4O75132 1171 aa18.4■□□□□ 0.54
MRPL55-201ENST00000295008 MAP2K2P36507 400 aa18.4■□□□□ 0.54
MRPL55-201ENST00000295008 AKAP17AQ02040 695 aaKnown RBP18.4■□□□□ 0.54
MRPL55-201ENST00000295008 OTUD7BQ6GQQ9 843 aa18.4■□□□□ 0.54
MRPL55-201ENST00000295008 CCDC174Q6PII3 467 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms