RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 RIOX1Q9H6W3 641 aa16.04■□□□□ 0.16
ABCF3-201ENST00000292808 KCNH3Q9ULD8 1083 aa16.04■□□□□ 0.16
ABCF3-201ENST00000292808 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
ABCF3-201ENST00000292808 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
ABCF3-201ENST00000292808 CALML3P27482 149 aa16.04■□□□□ 0.16
ABCF3-201ENST00000292808 ZNF174Q15697 407 aa16.04■□□□□ 0.16
ABCF3-201ENST00000292808 LONRF3Q496Y0 759 aa16.04■□□□□ 0.16
ABCF3-201ENST00000292808 ZNF579Q8NAF0 562 aaKnown RBP16.04■□□□□ 0.16
ABCF3-201ENST00000292808 PIGSQ96S52 555 aa16.04■□□□□ 0.16
ABCF3-201ENST00000292808 MTFR1LQ9H019 292 aa16.04■□□□□ 0.16
ABCF3-201ENST00000292808 PIM2Q9P1W9 311 aa16.04■□□□□ 0.16
ABCF3-201ENST00000292808 CEP131Q9UPN4 1083 aa16.04■□□□□ 0.16
ABCF3-201ENST00000292808 ENTPD3O75355 529 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 NLRP12P59046 1061 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 PNOCQ13519 176 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 CCDC17Q96LX7 622 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 CSRNP2Q9H175 543 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 PCDHA6Q9UN73 950 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 PCDHA8Q9Y5H6 950 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 MPHOSPH10O00566 681 aaKnown RBP16.03■□□□□ 0.16
ABCF3-201ENST00000292808 JAG1P78504 1218 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 RRP1BQ14684 758 aaKnown RBP16.03■□□□□ 0.16
ABCF3-201ENST00000292808 HOMER1Q86YM7 354 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 SIAH1Q8IUQ4 282 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 CNNM3Q8NE01 707 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 MYRIPQ8NFW9 859 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 BPIFA3Q9BQP9 254 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 ARFGEF1Q9Y6D6 1849 aa16.03■□□□□ 0.16
ABCF3-201ENST00000292808 ZNF543Q08ER8 600 aa16.02■□□□□ 0.16
ABCF3-201ENST00000292808 ASPRV1Q53RT3 343 aa16.02■□□□□ 0.16
ABCF3-201ENST00000292808 ZSCAN29Q8IWY8 852 aaPredicted RBP16.02■□□□□ 0.16
ABCF3-201ENST00000292808 SGIP1Q9BQI5 828 aa16.02■□□□□ 0.16
ABCF3-201ENST00000292808 VPS33BQ9H267 617 aa16.02■□□□□ 0.16
ABCF3-201ENST00000292808 ZNRF3Q9ULT6 936 aa16.02■□□□□ 0.16
ABCF3-201ENST00000292808 TRAPPC10P48553 1259 aa16.02■□□□□ 0.15
ABCF3-201ENST00000292808 ATP2C1P98194 919 aaPredicted RBP16.02■□□□□ 0.15
ABCF3-201ENST00000292808 HSP90AA2PQ14568 343 aaPredicted RBP16.02■□□□□ 0.15
ABCF3-201ENST00000292808 KRBA2Q6ZNG9 492 aa16.02■□□□□ 0.15
ABCF3-201ENST00000292808 CCDC148Q8NFR7 591 aa16.02■□□□□ 0.15
ABCF3-201ENST00000292808 RRP36Q96EU6 259 aaKnown RBP16.02■□□□□ 0.15
ABCF3-201ENST00000292808 ZMYND12Q9H0C1 365 aa16.02■□□□□ 0.15
ABCF3-201ENST00000292808 VAT1LQ9HCJ6 419 aa16.02■□□□□ 0.15
ABCF3-201ENST00000292808 FAM13BQ9NYF5 915 aa16.02■□□□□ 0.15
ABCF3-201ENST00000292808 CNTNAP1P78357 1384 aa16.01■□□□□ 0.15
ABCF3-201ENST00000292808 CERKLQ49MI3 558 aaPredicted RBP16.01■□□□□ 0.15
ABCF3-201ENST00000292808 FOXP4Q8IVH2 680 aaPredicted RBP16.01■□□□□ 0.15
ABCF3-201ENST00000292808 GPCPD1Q9NPB8 672 aa16.01■□□□□ 0.15
ABCF3-201ENST00000292808 A0A087X0B3 334 aa16.01■□□□□ 0.15
ABCF3-201ENST00000292808 CLRN2A0PK11 232 aa16.01■□□□□ 0.15
ABCF3-201ENST00000292808 FOXN1O15353 648 aa16.01■□□□□ 0.15
ABCF3-201ENST00000292808 LRMPQ12912 555 aa16.01■□□□□ 0.15
ABCF3-201ENST00000292808 PTGDRQ13258 359 aa16.01■□□□□ 0.15
ABCF3-201ENST00000292808 IL17AQ16552 155 aa16.01■□□□□ 0.15
ABCF3-201ENST00000292808 SOGA3Q5TF21 947 aa16.01■□□□□ 0.15
ABCF3-201ENST00000292808 TTBK2Q6IQ55 1244 aa16.01■□□□□ 0.15
ABCF3-201ENST00000292808 NIM1KQ8IY84 436 aa16.01■□□□□ 0.15
ABCF3-201ENST00000292808 FAM177A1Q8N128 213 aaPredicted RBP16.01■□□□□ 0.15
ABCF3-201ENST00000292808 C4orf32Q8N8J7 132 aa16.01■□□□□ 0.15
ABCF3-201ENST00000292808 ZNF70Q9UC06 446 aaPredicted RBP16.01■□□□□ 0.15
ABCF3-201ENST00000292808 TUBE1Q9UJT0 475 aa16.01■□□□□ 0.15
ABCF3-201ENST00000292808 NFKBIEO00221 500 aa16■□□□□ 0.15
ABCF3-201ENST00000292808 EEF2P13639 858 aaKnown RBP16■□□□□ 0.15
ABCF3-201ENST00000292808 MDM2Q00987 491 aaPredicted RBP16■□□□□ 0.15
ABCF3-201ENST00000292808 CXCL9Q07325 125 aa16■□□□□ 0.15
ABCF3-201ENST00000292808 SEPT2Q15019 361 aa16■□□□□ 0.15
ABCF3-201ENST00000292808 R3HDM1Q15032 1099 aaKnown RBP16■□□□□ 0.15
ABCF3-201ENST00000292808 CCDC144BQ3MJ40 725 aa16■□□□□ 0.15
ABCF3-201ENST00000292808 DALRD3Q5D0E6 543 aaKnown RBP16■□□□□ 0.15
ABCF3-201ENST00000292808 GALNT17Q6IS24 598 aa16■□□□□ 0.15
ABCF3-201ENST00000292808 POLR2DO15514 142 aaKnown RBP16■□□□□ 0.15
ABCF3-201ENST00000292808 NEMFO60524 1076 aa16■□□□□ 0.15
ABCF3-201ENST00000292808 GDF11O95390 407 aa16■□□□□ 0.15
ABCF3-201ENST00000292808 BMP15O95972 392 aa16■□□□□ 0.15
ABCF3-201ENST00000292808 POLD1P28340 1107 aa16■□□□□ 0.15
ABCF3-201ENST00000292808 GTF2F1P35269 517 aaKnown RBP eCLIP16■□□□□ 0.15
ABCF3-201ENST00000292808 NAPAP54920 295 aa16■□□□□ 0.15
ABCF3-201ENST00000292808 MKL1Q969V6 931 aa16■□□□□ 0.15
ABCF3-201ENST00000292808 JMJD4Q9H9V9 463 aa16■□□□□ 0.15
ABCF3-201ENST00000292808 TCP10L2B9ZVM9 353 aa15.99■□□□□ 0.15
ABCF3-201ENST00000292808 PPP1R11O60927 126 aaPredicted RBP15.99■□□□□ 0.15
ABCF3-201ENST00000292808 ATP2B2Q01814 1243 aa15.99■□□□□ 0.15
ABCF3-201ENST00000292808 SPDYE2Q495Y8 402 aa15.99■□□□□ 0.15
ABCF3-201ENST00000292808 PDILTQ8N807 584 aa15.99■□□□□ 0.15
ABCF3-201ENST00000292808 EPSTI1Q96J88 318 aa15.99■□□□□ 0.15
ABCF3-201ENST00000292808 NYAP2Q9P242 653 aa15.99■□□□□ 0.15
ABCF3-201ENST00000292808 ACTN4O43707 911 aaKnown RBP15.99■□□□□ 0.15
ABCF3-201ENST00000292808 MCM7P33993 719 aa15.99■□□□□ 0.15
ABCF3-201ENST00000292808 DLGAP5Q15398 846 aa15.99■□□□□ 0.15
ABCF3-201ENST00000292808 CDAN1Q8IWY9 1227 aa15.99■□□□□ 0.15
ABCF3-201ENST00000292808 FERMT2Q96AC1 680 aa15.99■□□□□ 0.15
ABCF3-201ENST00000292808 ZBED3Q96IU2 234 aaPredicted RBP15.99■□□□□ 0.15
ABCF3-201ENST00000292808 CSRNP1Q96S65 589 aa15.99■□□□□ 0.15
ABCF3-201ENST00000292808 SEC63Q9UGP8 760 aaKnown RBP15.99■□□□□ 0.15
ABCF3-201ENST00000292808 SERTAD1Q9UHV2 236 aa15.99■□□□□ 0.15
ABCF3-201ENST00000292808 PCDHA5Q9Y5H7 936 aa15.99■□□□□ 0.15
ABCF3-201ENST00000292808 SHTN1A0MZ66 631 aa15.98■□□□□ 0.15
ABCF3-201ENST00000292808 KCTD1Q719H9 257 aa15.98■□□□□ 0.15
ABCF3-201ENST00000292808 ADGRF4Q8IZF3 695 aa15.98■□□□□ 0.15
ABCF3-201ENST00000292808 AGBL3Q8NEM8 1001 aa15.98■□□□□ 0.15
ABCF3-201ENST00000292808 CACTINQ8WUQ7 758 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms