RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 PRPF38AQ8NAV1 312 aaKnown RBP30.02■■■□□ 2.4
U2AF1-201ENST00000291552 EVI5LQ96CN4 794 aa30.02■■■□□ 2.4
U2AF1-201ENST00000291552 INCENPQ9NQS7 918 aa30.02■■■□□ 2.4
U2AF1-201ENST00000291552 ZBTB47Q9UFB7 747 aaPredicted RBP30.01■■■□□ 2.39
U2AF1-201ENST00000291552 TAL1P17542 331 aaPredicted RBP30■■■□□ 2.39
U2AF1-201ENST00000291552 ATN1P54259 1190 aaPredicted RBP30■■■□□ 2.39
U2AF1-201ENST00000291552 KIFC2Q96AC6 838 aa30■■■□□ 2.39
U2AF1-201ENST00000291552 TINF2Q9BSI4 451 aa30■■■□□ 2.39
U2AF1-201ENST00000291552 SLC38A10Q9HBR0 1119 aa30■■■□□ 2.39
U2AF1-201ENST00000291552 DIS3Q9Y2L1 958 aaKnown RBP30■■■□□ 2.39
U2AF1-201ENST00000291552 A0A0D9SFI3 127 aa29.99■■■□□ 2.39
U2AF1-201ENST00000291552 ATP2A1O14983 1001 aa29.99■■■□□ 2.39
U2AF1-201ENST00000291552 SLFN13Q68D06 897 aa29.99■■■□□ 2.39
U2AF1-201ENST00000291552 LRCH3Q96II8 777 aa29.99■■■□□ 2.39
U2AF1-201ENST00000291552 FAM227BQ96M60 508 aa29.99■■■□□ 2.39
U2AF1-201ENST00000291552 NRBP1Q9UHY1 535 aa29.99■■■□□ 2.39
U2AF1-201ENST00000291552 FEM1BQ9UK73 627 aa29.99■■■□□ 2.39
U2AF1-201ENST00000291552 SLC3A2P08195 630 aaKnown RBP29.98■■■□□ 2.39
U2AF1-201ENST00000291552 LNPKQ9C0E8 428 aa29.98■■■□□ 2.39
U2AF1-201ENST00000291552 RAVER2Q9HCJ3 691 aaKnown RBP29.98■■■□□ 2.39
U2AF1-201ENST00000291552 DNAJC25-GNG10A0A024R161 153 aa29.97■■■□□ 2.39
U2AF1-201ENST00000291552 LRRC41Q15345 812 aa29.97■■■□□ 2.39
U2AF1-201ENST00000291552 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.97■■■□□ 2.39
U2AF1-201ENST00000291552 RASGRP2Q7LDG7 609 aa29.97■■■□□ 2.39
U2AF1-201ENST00000291552 SMC5Q8IY18 1101 aa29.97■■■□□ 2.39
U2AF1-201ENST00000291552 CPXCR1Q8N123 301 aa29.97■■■□□ 2.39
U2AF1-201ENST00000291552 ARRDC4Q8NCT1 418 aa29.97■■■□□ 2.39
U2AF1-201ENST00000291552 IL17RBQ9NRM6 502 aa29.97■■■□□ 2.39
U2AF1-201ENST00000291552 HELLSQ9NRZ9 838 aa29.97■■■□□ 2.39
U2AF1-201ENST00000291552 ANAPC4Q9UJX5 808 aa29.97■■■□□ 2.39
U2AF1-201ENST00000291552 NMT2O60551 498 aa29.96■■■□□ 2.39
U2AF1-201ENST00000291552 ZBED4O75132 1171 aa29.96■■■□□ 2.39
U2AF1-201ENST00000291552 ZNF865P0CJ78 1059 aaPredicted RBP29.96■■■□□ 2.39
U2AF1-201ENST00000291552 BMP3P12645 472 aa29.96■■■□□ 2.39
U2AF1-201ENST00000291552 RTP1P59025 263 aa29.96■■■□□ 2.39
U2AF1-201ENST00000291552 KBTBD13C9JR72 458 aa29.95■■■□□ 2.39
U2AF1-201ENST00000291552 ALX1Q15699 326 aa29.95■■■□□ 2.39
U2AF1-201ENST00000291552 LENG1Q96BZ8 264 aaPredicted RBP29.95■■■□□ 2.39
U2AF1-201ENST00000291552 FGD4Q96M96 766 aa29.95■■■□□ 2.39
U2AF1-201ENST00000291552 LCTP09848 1927 aa29.94■■■□□ 2.38
U2AF1-201ENST00000291552 ZNF589Q86UQ0 364 aaPredicted RBP29.94■■■□□ 2.38
U2AF1-201ENST00000291552 CHMP4CQ96CF2 233 aa29.94■■■□□ 2.38
U2AF1-201ENST00000291552 GMCL1Q96IK5 515 aa29.94■■■□□ 2.38
U2AF1-201ENST00000291552 LAMA4Q16363 1823 aa29.94■■■□□ 2.38
U2AF1-201ENST00000291552 TMEM232C9JQI7 657 aa29.93■■■□□ 2.38
U2AF1-201ENST00000291552 FGRP09769 529 aa29.93■■■□□ 2.38
U2AF1-201ENST00000291552 SLC4A3P48751 1232 aa29.93■■■□□ 2.38
U2AF1-201ENST00000291552 MDM2Q00987 491 aaPredicted RBP29.93■■■□□ 2.38
U2AF1-201ENST00000291552 NMIQ13287 307 aaPredicted RBP29.93■■■□□ 2.38
U2AF1-201ENST00000291552 AAMPQ13685 434 aa29.93■■■□□ 2.38
U2AF1-201ENST00000291552 SNX17Q15036 470 aa29.93■■■□□ 2.38
U2AF1-201ENST00000291552 UBE2OQ9C0C9 1292 aaKnown RBP29.93■■■□□ 2.38
U2AF1-201ENST00000291552 LRRC37A2A6NM11 1700 aa29.93■■■□□ 2.38
U2AF1-201ENST00000291552 TSPY2A6NKD2 308 aa29.92■■■□□ 2.38
U2AF1-201ENST00000291552 ORC4O43929 436 aa29.92■■■□□ 2.38
U2AF1-201ENST00000291552 SNAI1O95863 264 aaPredicted RBP29.92■■■□□ 2.38
U2AF1-201ENST00000291552 IGHDP01880 384 aa29.92■■■□□ 2.38
U2AF1-201ENST00000291552 MYCNP04198 464 aaPredicted RBP29.92■■■□□ 2.38
U2AF1-201ENST00000291552 ADCYAP1R1P41586 468 aa29.92■■■□□ 2.38
U2AF1-201ENST00000291552 NOVP48745 357 aa29.92■■■□□ 2.38
U2AF1-201ENST00000291552 OAZ1P54368 228 aa29.92■■■□□ 2.38
U2AF1-201ENST00000291552 SLC39A5Q6ZMH5 540 aa29.92■■■□□ 2.38
U2AF1-201ENST00000291552 TDHQ8IZJ6 230 aa29.92■■■□□ 2.38
U2AF1-201ENST00000291552 XPNPEP3Q9NQH7 507 aa29.92■■■□□ 2.38
U2AF1-201ENST00000291552 RARBP10826 455 aa29.91■■■□□ 2.38
U2AF1-201ENST00000291552 MCCP23508 829 aa29.91■■■□□ 2.38
U2AF1-201ENST00000291552 MCMDC2Q4G0Z9 681 aa29.91■■■□□ 2.38
U2AF1-201ENST00000291552 MAMDC4Q6UXC1 1216 aa29.91■■■□□ 2.38
U2AF1-201ENST00000291552 EXOC6Q8TAG9 804 aa29.91■■■□□ 2.38
U2AF1-201ENST00000291552 DDX11Q96FC9 970 aa29.91■■■□□ 2.38
U2AF1-201ENST00000291552 STX8Q9UNK0 236 aa29.91■■■□□ 2.38
U2AF1-201ENST00000291552 ATP11BQ9Y2G3 1177 aa29.91■■■□□ 2.38
U2AF1-201ENST00000291552 ZNF536O15090 1300 aa29.91■■■□□ 2.38
U2AF1-201ENST00000291552 SYNGAP1Q96PV0 1343 aa29.91■■■□□ 2.38
U2AF1-201ENST00000291552 LAMA2P24043 3122 aaKnown RBP29.91■■■□□ 2.38
U2AF1-201ENST00000291552 PGK1P00558 417 aa29.9■■■□□ 2.38
U2AF1-201ENST00000291552 FGAP02671 866 aa29.9■■■□□ 2.38
U2AF1-201ENST00000291552 SLC1A4P43007 532 aa29.9■■■□□ 2.38
U2AF1-201ENST00000291552 STAT2P52630 851 aa29.9■■■□□ 2.38
U2AF1-201ENST00000291552 B4GALNT3Q6L9W6 998 aa29.9■■■□□ 2.38
U2AF1-201ENST00000291552 MSL3Q8N5Y2 521 aaKnown RBP29.9■■■□□ 2.38
U2AF1-201ENST00000291552 FERMT2Q96AC1 680 aa29.9■■■□□ 2.38
U2AF1-201ENST00000291552 CTDP1Q9Y5B0 961 aaPredicted RBP29.9■■■□□ 2.38
U2AF1-201ENST00000291552 RANBP6O60518 1105 aaKnown RBP29.89■■■□□ 2.38
U2AF1-201ENST00000291552 HSPD1P10809 573 aaKnown RBP29.89■■■□□ 2.38
U2AF1-201ENST00000291552 AKR1A1P14550 325 aa29.89■■■□□ 2.38
U2AF1-201ENST00000291552 LRIT3Q3SXY7 679 aa29.89■■■□□ 2.38
U2AF1-201ENST00000291552 KCTD1Q719H9 257 aa29.89■■■□□ 2.38
U2AF1-201ENST00000291552 TICAM2Q86XR7 235 aa29.89■■■□□ 2.38
U2AF1-201ENST00000291552 CHST13Q8NET6 341 aa29.89■■■□□ 2.38
U2AF1-201ENST00000291552 STAG1Q8WVM7 1258 aa29.89■■■□□ 2.38
U2AF1-201ENST00000291552 ISY1Q9ULR0 285 aaKnown RBP29.89■■■□□ 2.38
U2AF1-201ENST00000291552 PHF24Q9UPV7 400 aa29.89■■■□□ 2.38
U2AF1-201ENST00000291552 CNPY2Q9Y2B0 182 aa29.89■■■□□ 2.38
U2AF1-201ENST00000291552 ZMYM6O95789 1325 aa29.89■■■□□ 2.38
U2AF1-201ENST00000291552 ADAMTS4O75173 837 aa29.88■■■□□ 2.37
U2AF1-201ENST00000291552 TRIM60Q495X7 471 aa29.88■■■□□ 2.37
U2AF1-201ENST00000291552 ZNF467Q7Z7K2 595 aaPredicted RBP29.88■■■□□ 2.37
U2AF1-201ENST00000291552 FAM160B2Q86V87 743 aa29.88■■■□□ 2.37
U2AF1-201ENST00000291552 PLEKHM2Q8IWE5 1019 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms