RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 TIMP1P01033 207 aa12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 CHGBP05060 677 aa12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 ADD2P35612 726 aa12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 IRX5P78411 483 aaPredicted RBP12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 KCNA10Q16322 511 aa12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 HSP90AB4PQ58FF6 505 aa12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 C16orf86Q6ZW13 317 aa12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 AMOTL1Q8IY63 956 aa12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 CLASRPQ8N2M8 674 aaKnown RBP12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 PPM1EQ8WY54 764 aa12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 NUP88Q99567 741 aaPredicted RBP12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 KANSL2Q9H9L4 492 aa12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 GOPCQ9HD26 462 aa12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 ZHX1Q9UKY1 873 aaPredicted RBP12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 TBX21Q9UL17 535 aa12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 MYH8P13535 1937 aa12.93□□□□□ -0.34
NSMCE2-201ENST00000287437 ZNFX1Q9P2E3 1918 aaKnown RBP12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 MOXD2PA6NHM9 499 aa12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 GRXCR1A8MXD5 290 aa12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 TNFRSF10AO00220 468 aa12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 IFIT2P09913 472 aaKnown RBP12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 COPB2P35606 906 aa12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 PBX2P40425 430 aa12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 SNRNP48Q6IEG0 339 aaKnown RBP12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 CCSAPQ6IQ19 270 aaPredicted RBP12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 C16orf59Q7L2K0 433 aa12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 KLHDC9Q8NEP7 349 aa12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 PBX4Q9BYU1 374 aa12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 PAG1Q9NWQ8 432 aa12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 PLXNA1Q9UIW2 1896 aa12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 FAM184BQ9ULE4 1060 aa12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 RIPK3Q9Y572 518 aa12.92□□□□□ -0.34
NSMCE2-201ENST00000287437 SYNGAP1Q96PV0 1343 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 ADCY6O43306 1168 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 C6orf222P0C671 652 aaPredicted RBP12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 CSF2RAP15509 400 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 COL9A1P20849 921 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 SLC4A3P48751 1232 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 TMEM240Q5SV17 173 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 MFSD5Q6N075 450 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 CCDC129Q6ZRS4 1044 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 MSL3Q8N5Y2 521 aaKnown RBP12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 PANK1Q8TE04 598 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 KIF1BPQ96EK5 621 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 DDX11Q96FC9 970 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 GLT1D1Q96MS3 346 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 SLF1Q9BQI6 1058 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 TEX13BQ9BXU2 312 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 BOLA2Q9H3K6 86 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 PRDM12Q9H4Q4 367 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 SLC4A4Q9Y6R1 1079 aa12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 BAZ2AQ9UIF9 1905 aaKnown RBP12.91□□□□□ -0.34
NSMCE2-201ENST00000287437 MROH7Q68CQ1 1323 aa12.9□□□□□ -0.34
NSMCE2-201ENST00000287437 DNAJC25-GNG10A0A024R161 153 aa12.9□□□□□ -0.34
NSMCE2-201ENST00000287437 DUSP11O75319 330 aaKnown RBP12.9□□□□□ -0.34
NSMCE2-201ENST00000287437 ASGR1P07306 291 aa12.9□□□□□ -0.34
NSMCE2-201ENST00000287437 ACRP10323 421 aa12.9□□□□□ -0.34
NSMCE2-201ENST00000287437 PPIGQ13427 754 aaKnown RBP eCLIP12.9□□□□□ -0.34
NSMCE2-201ENST00000287437 CTR9Q6PD62 1173 aa12.9□□□□□ -0.34
NSMCE2-201ENST00000287437 MAMDC4Q6UXC1 1216 aa12.9□□□□□ -0.34
NSMCE2-201ENST00000287437 VTI1AQ96AJ9 217 aa12.9□□□□□ -0.34
NSMCE2-201ENST00000287437 DDRGK1Q96HY6 314 aa12.9□□□□□ -0.34
NSMCE2-201ENST00000287437 GAS2L1Q99501 681 aaPredicted RBP12.9□□□□□ -0.34
NSMCE2-201ENST00000287437 PPP1R12CQ9BZL4 782 aa12.9□□□□□ -0.34
NSMCE2-201ENST00000287437 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.9□□□□□ -0.34
NSMCE2-201ENST00000287437 ELP1O95163 1332 aa12.89□□□□□ -0.35
NSMCE2-201ENST00000287437 ZBED9Q6R2W3 1325 aa12.89□□□□□ -0.35
NSMCE2-201ENST00000287437 CST5P28325 142 aaPredicted RBP12.89□□□□□ -0.35
NSMCE2-201ENST00000287437 CDK7P50613 346 aa12.89□□□□□ -0.35
NSMCE2-201ENST00000287437 ACVR2BQ13705 512 aa12.89□□□□□ -0.35
NSMCE2-201ENST00000287437 RASIP1Q5U651 963 aa12.89□□□□□ -0.35
NSMCE2-201ENST00000287437 ZNF365Q70YC5 407 aa12.89□□□□□ -0.35
NSMCE2-201ENST00000287437 CPXCR1Q8N123 301 aa12.89□□□□□ -0.35
NSMCE2-201ENST00000287437 STK11IPQ8N1F8 1099 aa12.89□□□□□ -0.35
NSMCE2-201ENST00000287437 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.89□□□□□ -0.35
NSMCE2-201ENST00000287437 RAPGEFL1Q9UHV5 662 aa12.89□□□□□ -0.35
NSMCE2-201ENST00000287437 A0A0U1RQG5 324 aaPredicted RBP12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 ARVCFO00192 962 aa12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 NDUFB10O96000 172 aa12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 ATP5JP18859 108 aa12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 UBE3CQ15386 1083 aa12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 CCDC85BQ15834 202 aaPredicted RBP12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 CCDC144BQ3MJ40 725 aa12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 CCDC174Q6PII3 467 aa12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 ZNF467Q7Z7K2 595 aaPredicted RBP12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 FAM126BQ8IXS8 530 aa12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 TMEM199Q8N511 208 aa12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 PRPF38AQ8NAV1 312 aaKnown RBP12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 ATXN2LQ8WWM7 1075 aaKnown RBP12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 FGD4Q96M96 766 aa12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 HAUS7Q99871 368 aa12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 PUS7LQ9H0K6 701 aaKnown RBP12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 RAVER2Q9HCJ3 691 aaKnown RBP12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 THEGQ9P2T0 379 aa12.88□□□□□ -0.35
NSMCE2-201ENST00000287437 CHD9Q3L8U1 2897 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 F5H6K3 240 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 RASA1P20936 1047 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms