RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 G3V3G9 751 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 PES1O00541 588 aaKnown RBP8.59□□□□□ -1.03
TRIM42-201ENST00000286349 PRPF3O43395 683 aaKnown RBP8.59□□□□□ -1.03
TRIM42-201ENST00000286349 PPFIA3O75145 1194 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 EIF3JO75822 258 aaKnown RBP8.59□□□□□ -1.03
TRIM42-201ENST00000286349 SKILP12757 684 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 NAT1P18440 290 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 PEX19P40855 299 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 ZNF165P49910 485 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 DCAF8Q5TAQ9 597 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 STRIP1Q5VSL9 837 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 USP17L1Q7RTZ2 530 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.59□□□□□ -1.03
TRIM42-201ENST00000286349 ENAHQ8N8S7 591 aaPredicted RBP8.59□□□□□ -1.03
TRIM42-201ENST00000286349 NUP133Q8WUM0 1156 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 MAP3K14Q99558 947 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 ZKSCAN3Q9BRR0 538 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 MYL10Q9BUA6 226 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 SUN2Q9UH99 717 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 ROBO3Q96MS0 1386 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 SCN9AQ15858 1988 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 SHTN1A0MZ66 631 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 GOLGA6L19H0YKK7 550 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 CUTAO60888 179 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 FAM200BP0CF97 657 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 TNNT1P13805 278 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 USP5P45974 858 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 HSP90B2PQ58FF3 399 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 ELOA2Q8IYF1 753 aaPredicted RBP8.59□□□□□ -1.03
TRIM42-201ENST00000286349 CTCFLQ8NI51 663 aaPredicted RBP8.59□□□□□ -1.03
TRIM42-201ENST00000286349 SDF4Q9BRK5 362 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 CBX8Q9HC52 389 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 CHCHD3Q9NX63 227 aaKnown RBP8.59□□□□□ -1.03
TRIM42-201ENST00000286349 FAM237AA0A1B0GTK4 181 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 BMP15O95972 392 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 KIF5BP33176 963 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 MCCD1P59942 119 aaPredicted RBP8.58□□□□□ -1.04
TRIM42-201ENST00000286349 HOOK1Q9UJC3 728 aaKnown RBP8.58□□□□□ -1.04
TRIM42-201ENST00000286349 SBF1O95248 1867 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 ECM29Q5VYK3 1845 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 DDNO94850 711 aaPredicted RBP8.58□□□□□ -1.04
TRIM42-201ENST00000286349 CASQ1P31415 396 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 PPP2R5AQ15172 486 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 MFSD14BQ5SR56 506 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 CIAPIN1Q6FI81 312 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 RSBN1LQ6PCB5 846 aaPredicted RBP8.58□□□□□ -1.04
TRIM42-201ENST00000286349 MAMSTRQ6ZN01 415 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 DGKHQ86XP1 1220 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 DIS3L2Q8IYB7 885 aaKnown RBP8.58□□□□□ -1.04
TRIM42-201ENST00000286349 CEP57L1Q8IYX8 460 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 GOLGA6L1Q8N7Z2 621 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 LSM14AQ8ND56 463 aaKnown RBP8.58□□□□□ -1.04
TRIM42-201ENST00000286349 FBXW7Q969H0 707 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 AIFM3Q96NN9 605 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 TCP11L1Q9NUJ3 509 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 MCM9Q9NXL9 1143 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 PCDHAC2Q9Y5I4 1007 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 MROH7-TTC4A0A0A0MT08 1334 aa8.58□□□□□ -1.04
TRIM42-201ENST00000286349 TSPY2A6NKD2 308 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 RIOK3O14730 519 aaKnown RBP8.57□□□□□ -1.04
TRIM42-201ENST00000286349 PPFIA2O75334 1257 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 ZNF202O95125 648 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 NDUFA8P51970 172 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 FKBP1AP62942 108 aaKnown RBP8.57□□□□□ -1.04
TRIM42-201ENST00000286349 IRX1P78414 480 aaPredicted RBP8.57□□□□□ -1.04
TRIM42-201ENST00000286349 TROAPQ12815 778 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 PTPAQ15257 358 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 C12orf60Q5U649 245 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 OGFOD1Q8N543 542 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 ANKS1AQ92625 1134 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 FAM163AQ96GL9 167 aaPredicted RBP8.57□□□□□ -1.04
TRIM42-201ENST00000286349 BPIFA3Q9BQP9 254 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 ARHGEF10LQ9HCE6 1279 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 MAGEC2Q9UBF1 373 aaPredicted RBP8.57□□□□□ -1.04
TRIM42-201ENST00000286349 MKRN1Q9UHC7 482 aaKnown RBP8.57□□□□□ -1.04
TRIM42-201ENST00000286349 A0A1B0GVL5 298 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 BECN2A8MW95 431 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 KIF4AO95239 1232 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 CDC25BP30305 580 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 GNAQP50148 359 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 TPM4P67936 248 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 SARM1Q6SZW1 724 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 STK11IPQ8N1F8 1099 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 ZNF710Q8N1W2 664 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 KRI1Q8N9T8 703 aaKnown RBP8.57□□□□□ -1.04
TRIM42-201ENST00000286349 ZNF579Q8NAF0 562 aaKnown RBP8.57□□□□□ -1.04
TRIM42-201ENST00000286349 CCDC34Q96HJ3 373 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 PRIMPOLQ96LW4 560 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 DNAJC25Q9H1X3 360 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 GJB4Q9NTQ9 266 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 KIAA1468Q9P260 1216 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 GJA3Q9Y6H8 435 aa8.57□□□□□ -1.04
TRIM42-201ENST00000286349 ZNF646O15015 1829 aaPredicted RBP8.57□□□□□ -1.04
TRIM42-201ENST00000286349 F8W031 263 aaPredicted RBP8.56□□□□□ -1.04
TRIM42-201ENST00000286349 FAM163BP0C2L3 166 aa8.56□□□□□ -1.04
TRIM42-201ENST00000286349 PFKFB1P16118 471 aa8.56□□□□□ -1.04
TRIM42-201ENST00000286349 KRT2P35908 639 aa8.56□□□□□ -1.04
TRIM42-201ENST00000286349 SYKP43405 635 aa8.56□□□□□ -1.04
TRIM42-201ENST00000286349 EIF6P56537 245 aaKnown RBP8.56□□□□□ -1.04
TRIM42-201ENST00000286349 INHBEP58166 350 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms