RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 RIOX1Q9H6W3 641 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 ELP3Q9H9T3 547 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 JMJD4Q9H9V9 463 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 AS3MTQ9HBK9 375 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
XRCC4-201ENST00000282268 CSADQ9Y600 493 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 GOLGA6L22H0YM25 854 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 PRPF40AO75400 957 aaKnown RBP13.12□□□□□ -0.31
XRCC4-201ENST00000282268 NAPAP54920 295 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 NR5A1Q13285 461 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 SYDE2Q5VT97 1194 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.12□□□□□ -0.31
XRCC4-201ENST00000282268 KIFC2Q96AC6 838 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 COA7Q96BR5 231 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 CLMNQ96JQ2 1002 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 GINM1Q9NU53 330 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 SNCAIPQ9Y6H5 919 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 ATAD5Q96QE3 1844 aa13.11□□□□□ -0.31
XRCC4-201ENST00000282268 STXBP3O00186 592 aa13.11□□□□□ -0.31
XRCC4-201ENST00000282268 KRT2P35908 639 aa13.11□□□□□ -0.31
XRCC4-201ENST00000282268 ZNF280CQ8ND82 737 aa13.11□□□□□ -0.31
XRCC4-201ENST00000282268 PHF20Q9BVI0 1012 aa13.11□□□□□ -0.31
XRCC4-201ENST00000282268 FTOQ9C0B1 505 aaKnown RBP eCLIP13.11□□□□□ -0.31
XRCC4-201ENST00000282268 TANGO6Q9C0B7 1094 aa13.11□□□□□ -0.31
XRCC4-201ENST00000282268 ADAMTS3O15072 1205 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 TAL1P17542 331 aaPredicted RBP13.1□□□□□ -0.31
XRCC4-201ENST00000282268 ATP2B1P20020 1258 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 STAT2P52630 851 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 HMGCS2P54868 508 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 KRT85P78386 507 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 CDC37Q16543 378 aaPredicted RBP13.1□□□□□ -0.31
XRCC4-201ENST00000282268 QRICH1Q2TAL8 776 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 NOL9Q5SY16 702 aaKnown RBP13.1□□□□□ -0.31
XRCC4-201ENST00000282268 TYW1BQ6NUM6 668 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 CCDC174Q6PII3 467 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 ARMC9Q7Z3E5 817 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 LDHDQ86WU2 507 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 KIAA1683Q9H0B3 1180 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 BRMS1Q9HCU9 246 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 EMILIN3Q9NT22 766 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 FBXO28Q9NVF7 368 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 BARHL2Q9NY43 387 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 SYNPO2Q9UMS6 1093 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 DOCK1Q14185 1865 aa13.1□□□□□ -0.31
XRCC4-201ENST00000282268 PNMA6FA0A0J9YX94 578 aa13.09□□□□□ -0.31
XRCC4-201ENST00000282268 DDX11L8A8MPP1 907 aa13.09□□□□□ -0.31
XRCC4-201ENST00000282268 PPP1R11O60927 126 aaPredicted RBP13.09□□□□□ -0.31
XRCC4-201ENST00000282268 BACE1P56817 501 aa13.09□□□□□ -0.31
XRCC4-201ENST00000282268 CLEC17AQ6ZS10 378 aa13.09□□□□□ -0.31
XRCC4-201ENST00000282268 OTUD5Q96G74 571 aa13.09□□□□□ -0.31
XRCC4-201ENST00000282268 ZNF396Q96N95 335 aaPredicted RBP13.09□□□□□ -0.31
XRCC4-201ENST00000282268 WDR18Q9BV38 432 aa13.09□□□□□ -0.31
XRCC4-201ENST00000282268 PRR12Q9ULL5 1215 aa13.09□□□□□ -0.31
XRCC4-201ENST00000282268 BAZ2BQ9UIF8 2168 aaKnown RBP13.09□□□□□ -0.31
XRCC4-201ENST00000282268 FAM205CA6NFA0 338 aa13.08□□□□□ -0.31
XRCC4-201ENST00000282268 SMCO2A6NFE2 343 aa13.08□□□□□ -0.31
XRCC4-201ENST00000282268 ZBTB5O15062 677 aa13.08□□□□□ -0.31
XRCC4-201ENST00000282268 USH1GQ495M9 461 aa13.08□□□□□ -0.31
XRCC4-201ENST00000282268 NOM1Q5C9Z4 860 aaKnown RBP13.08□□□□□ -0.31
XRCC4-201ENST00000282268 BRAPQ7Z569 592 aa13.08□□□□□ -0.31
XRCC4-201ENST00000282268 RASGRP4Q8TDF6 673 aa13.08□□□□□ -0.31
XRCC4-201ENST00000282268 CHURC1Q8WUH1 139 aa13.08□□□□□ -0.31
XRCC4-201ENST00000282268 RPAP3Q9H6T3 665 aaPredicted RBP13.08□□□□□ -0.31
XRCC4-201ENST00000282268 SH3GLB2Q9NR46 395 aa13.08□□□□□ -0.31
XRCC4-201ENST00000282268 MYH6P13533 1939 aa13.08□□□□□ -0.32
XRCC4-201ENST00000282268 VCAM1P19320 739 aa13.08□□□□□ -0.32
XRCC4-201ENST00000282268 USP14P54578 494 aa13.08□□□□□ -0.32
XRCC4-201ENST00000282268 MYSM1Q5VVJ2 828 aa13.08□□□□□ -0.32
XRCC4-201ENST00000282268 NOSTRINQ8IVI9 506 aa13.08□□□□□ -0.32
XRCC4-201ENST00000282268 ANKRD13AQ8IZ07 590 aa13.08□□□□□ -0.32
XRCC4-201ENST00000282268 BLIDQ8IZY5 108 aa13.08□□□□□ -0.32
XRCC4-201ENST00000282268 CCDC148Q8NFR7 591 aa13.08□□□□□ -0.32
XRCC4-201ENST00000282268 SPATA32Q96LK8 384 aa13.08□□□□□ -0.32
XRCC4-201ENST00000282268 TMOD4Q9NZQ9 345 aa13.08□□□□□ -0.32
XRCC4-201ENST00000282268 FEM1BQ9UK73 627 aa13.08□□□□□ -0.32
XRCC4-201ENST00000282268 AFG3L2Q9Y4W6 797 aa13.08□□□□□ -0.32
XRCC4-201ENST00000282268 WDR46O15213 610 aaKnown RBP13.07□□□□□ -0.32
XRCC4-201ENST00000282268 GADD45BO75293 160 aaPredicted RBP13.07□□□□□ -0.32
XRCC4-201ENST00000282268 CELF2O95319 508 aaKnown RBP13.07□□□□□ -0.32
XRCC4-201ENST00000282268 U2AF2P26368 475 aaKnown RBP eCLIP13.07□□□□□ -0.32
XRCC4-201ENST00000282268 CALML3P27482 149 aa13.07□□□□□ -0.32
XRCC4-201ENST00000282268 NPY5RQ15761 445 aa13.07□□□□□ -0.32
XRCC4-201ENST00000282268 EARS2Q5JPH6 523 aaKnown RBP13.07□□□□□ -0.32
XRCC4-201ENST00000282268 GADL1Q6ZQY3 521 aa13.07□□□□□ -0.32
XRCC4-201ENST00000282268 FAM160B2Q86V87 743 aa13.07□□□□□ -0.32
XRCC4-201ENST00000282268 USP28Q96RU2 1077 aa13.07□□□□□ -0.32
XRCC4-201ENST00000282268 FOXP1Q9H334 677 aaPredicted RBP13.07□□□□□ -0.32
XRCC4-201ENST00000282268 LMBRD1Q9NUN5 540 aa13.07□□□□□ -0.32
XRCC4-201ENST00000282268 PCDHA4Q9UN74 947 aa13.07□□□□□ -0.32
XRCC4-201ENST00000282268 CLIC4Q9Y696 253 aa13.07□□□□□ -0.32
XRCC4-201ENST00000282268 FLOT1O75955 427 aa13.06□□□□□ -0.32
XRCC4-201ENST00000282268 MKRN3Q13064 507 aaKnown RBP13.06□□□□□ -0.32
XRCC4-201ENST00000282268 BTNL9Q6UXG8 535 aa13.06□□□□□ -0.32
XRCC4-201ENST00000282268 PIK3AP1Q6ZUJ8 805 aa13.06□□□□□ -0.32
XRCC4-201ENST00000282268 FBXO11Q86XK2 927 aa13.06□□□□□ -0.32
XRCC4-201ENST00000282268 CCDC12Q8WUD4 166 aaPredicted RBP13.06□□□□□ -0.32
XRCC4-201ENST00000282268 LPAR1Q92633 364 aa13.06□□□□□ -0.32
XRCC4-201ENST00000282268 OPTNQ96CV9 577 aa13.06□□□□□ -0.32
XRCC4-201ENST00000282268 MTMR8Q96EF0 704 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms