RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 GPR142Q7Z601 462 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 PLEKHH3Q7Z736 793 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 FAM160B2Q86V87 743 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 DGKHQ86XP1 1220 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 CHURC1Q8WUH1 139 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 NUP133Q8WUM0 1156 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 TTC14Q96N46 770 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 MOV10L1Q9BXT6 1211 aaKnown RBP7.65□□□□□ -1.18
CD44-204ENST00000279452 SPATC1LQ9H0A9 340 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 RAVER2Q9HCJ3 691 aaKnown RBP7.65□□□□□ -1.18
CD44-204ENST00000279452 HOMER2Q9NSB8 354 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 GABRQQ9UN88 632 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 PARP1P09874 1014 aaKnown RBP7.64□□□□□ -1.19
CD44-204ENST00000279452 ERCC3P19447 782 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 STAT3P40763 770 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 PRMT2P55345 433 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 ZNF543Q08ER8 600 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 TMEM132BQ14DG7 1078 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 SYDE2Q5VT97 1194 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 TTBK2Q6IQ55 1244 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 CATIPQ7Z7H3 387 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 NBPF11Q86T75 865 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 MB21D2Q8IYB1 491 aaPredicted RBP7.64□□□□□ -1.19
CD44-204ENST00000279452 SH3TC2Q8TF17 1288 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 SOCS4Q8WXH5 440 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 TCEANC2Q96MN5 208 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 JAKMIP1Q96N16 626 aaKnown RBP7.64□□□□□ -1.19
CD44-204ENST00000279452 NEK1Q96PY6 1258 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 NUDT12Q9BQG2 462 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 TEX13BQ9BXU2 312 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 LRRC2Q9BYS8 371 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 PRR12Q9ULL5 1215 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 CASP8AP2Q9UKL3 1982 aa7.64□□□□□ -1.19
CD44-204ENST00000279452 ADCY3O60266 1144 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 EIF5BO60841 1220 aaKnown RBP7.63□□□□□ -1.19
CD44-204ENST00000279452 SLC25A27O95847 323 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 FCER1AP12319 257 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 ALAS1P13196 640 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 ELNP15502 786 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 GRK4P32298 578 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 HSPA4P34932 840 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 RGS2P41220 211 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 ANTXR2P58335 489 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 KCTD2Q14681 263 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 ASPRV1Q53RT3 343 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 GPATCH4Q5T3I0 446 aaKnown RBP7.63□□□□□ -1.19
CD44-204ENST00000279452 BLOC1S2Q6QNY1 142 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 POTEEQ6S8J3 1075 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 SYNE3Q6ZMZ3 975 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 DPP9Q86TI2 863 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 RAB11FIP4Q86YS3 637 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 CCDC144CPQ8IYA2 1237 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 RASEFQ8IZ41 740 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 SLAIN1Q8ND83 568 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 CTCFLQ8NI51 663 aaPredicted RBP7.63□□□□□ -1.19
CD44-204ENST00000279452 TMEM87BQ96K49 555 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 MMP19Q99542 508 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 MYL10Q9BUA6 226 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 UBA5Q9GZZ9 404 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 CPVLQ9H3G5 476 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 MROH8Q9H579 483 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 VAT1LQ9HCJ6 419 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 GPHNQ9NQX3 736 aaPredicted RBP7.63□□□□□ -1.19
CD44-204ENST00000279452 CCPG1Q9ULG6 757 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 SNX14Q9Y5W7 946 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 SLC12A7Q9Y666 1083 aa7.63□□□□□ -1.19
CD44-204ENST00000279452 MYH4Q9Y623 1939 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 A0A0G2JMZ2 1700 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 SLC15A5A6NIM6 579 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 SH2B2O14492 632 aaPredicted RBP7.62□□□□□ -1.19
CD44-204ENST00000279452 HMGB1P09429 215 aaKnown RBP7.62□□□□□ -1.19
CD44-204ENST00000279452 CPA1P15085 419 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 TAL1P17542 331 aaPredicted RBP7.62□□□□□ -1.19
CD44-204ENST00000279452 RXRAP19793 462 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 CASTP20810 708 aaKnown RBP7.62□□□□□ -1.19
CD44-204ENST00000279452 PTPREP23469 700 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 PSMA5P28066 241 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 ADORA2AP29274 412 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 COPB2P35606 906 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 NOVP48745 357 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 SOX10P56693 466 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 UBXN2AP68543 259 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 SEC23AQ15436 765 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 CDC37Q16543 378 aaPredicted RBP7.62□□□□□ -1.19
CD44-204ENST00000279452 ADCK5Q3MIX3 580 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 USH1GQ495M9 461 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 MICU3Q86XE3 530 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 HOMER1Q86YM7 354 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 RIOX2Q8IUF8 465 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 ZNF654Q8IZM8 581 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 ANKRD35Q8N283 1001 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 SHCBP1Q8NEM2 672 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 PIBF1Q8WXW3 757 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 DDX11Q96FC9 970 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 AGBL1Q96MI9 1066 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 APBA2Q99767 749 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 TMEM106CQ9BVX2 250 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 LY9Q9HBG7 655 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 SLC38A10Q9HBR0 1119 aa7.62□□□□□ -1.19
CD44-204ENST00000279452 SENP2Q9HC62 589 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms