RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 SEMA6CQ9H3T2 930 aa5.78□□□□□ -1.48
CD44-202ENST00000278385 ACSS3Q9H6R3 686 aa5.78□□□□□ -1.48
CD44-202ENST00000278385 DISC1Q9NRI5 854 aa5.78□□□□□ -1.48
CD44-202ENST00000278385 FANCLQ9NW38 375 aa5.78□□□□□ -1.48
CD44-202ENST00000278385 MAP3K20Q9NYL2 800 aaKnown RBP5.78□□□□□ -1.48
CD44-202ENST00000278385 NRBP1Q9UHY1 535 aa5.78□□□□□ -1.48
CD44-202ENST00000278385 DIP2CQ9Y2E4 1556 aa5.78□□□□□ -1.48
CD44-202ENST00000278385 SYCP2Q9BX26 1530 aa5.78□□□□□ -1.48
CD44-202ENST00000278385 UHRF1BP1Q6BDS2 1440 aa5.77□□□□□ -1.49
CD44-202ENST00000278385 MIA2Q96PC5 1412 aa5.77□□□□□ -1.49
CD44-202ENST00000278385 MINDY4BA8MYZ0 360 aa5.77□□□□□ -1.49
CD44-202ENST00000278385 COBLO75128 1261 aa5.77□□□□□ -1.49
CD44-202ENST00000278385 MAN1A1P33908 653 aa5.77□□□□□ -1.49
CD44-202ENST00000278385 LMOD3Q0VAK6 560 aa5.77□□□□□ -1.49
CD44-202ENST00000278385 SEPT6Q14141 434 aa5.77□□□□□ -1.49
CD44-202ENST00000278385 WIPI1Q5MNZ9 446 aaPredicted RBP5.77□□□□□ -1.49
CD44-202ENST00000278385 RAVER1Q8IY67 606 aaKnown RBP5.77□□□□□ -1.49
CD44-202ENST00000278385 SHKBP1Q8TBC3 707 aa5.77□□□□□ -1.49
CD44-202ENST00000278385 MPHOSPH6Q99547 160 aaKnown RBP5.77□□□□□ -1.49
CD44-202ENST00000278385 TMX4Q9H1E5 349 aaPredicted RBP5.77□□□□□ -1.49
CD44-202ENST00000278385 GSX1Q9H4S2 264 aaPredicted RBP5.77□□□□□ -1.49
CD44-202ENST00000278385 CASS4Q9NQ75 786 aa5.77□□□□□ -1.49
CD44-202ENST00000278385 SCINQ9Y6U3 715 aa5.77□□□□□ -1.49
CD44-202ENST00000278385 TIAM1Q13009 1591 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 MASP1P48740 699 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 EXOSC10Q01780 885 aaKnown RBP5.76□□□□□ -1.49
CD44-202ENST00000278385 LMNB2Q03252 620 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 CAMK2GQ13555 558 aaPredicted RBP5.76□□□□□ -1.49
CD44-202ENST00000278385 RINLQ6ZS11 566 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 ZAR1Q86SH2 424 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 WDR75Q8IWA0 830 aaKnown RBP5.76□□□□□ -1.49
CD44-202ENST00000278385 PHC3Q8NDX5 983 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 APPBP2Q92624 585 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 PLPPR2Q96GM1 343 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 SNTG2Q9NY99 539 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 PIM2Q9P1W9 311 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 RNF112Q9ULX5 631 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 TLR6Q9Y2C9 796 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 TACC3Q9Y6A5 838 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 CDC42BPAQ5VT25 1732 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 CCDC141Q6ZP82 1450 aa5.76□□□□□ -1.49
CD44-202ENST00000278385 ITSN2Q9NZM3 1697 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 WASHC2CQ9Y4E1 1318 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 NPATQ14207 1427 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 MYOM3Q5VTT5 1437 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 ATP7AQ04656 1500 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 CYP26A1O43174 497 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 PF4P02776 101 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 PTMAP06454 111 aaKnown RBP5.75□□□□□ -1.49
CD44-202ENST00000278385 TFE3P19532 575 aaPredicted RBP5.75□□□□□ -1.49
CD44-202ENST00000278385 COPB2P35606 906 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 RPL6Q02878 288 aaKnown RBP5.75□□□□□ -1.49
CD44-202ENST00000278385 PAK2Q13177 524 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 NFE2Q16621 373 aaPredicted RBP5.75□□□□□ -1.49
CD44-202ENST00000278385 LRP10Q7Z4F1 713 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 HID1Q8IV36 788 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 SDR16C5Q8N3Y7 309 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 SH3TC2Q8TF17 1288 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 FBXO41Q8TF61 875 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 PPM1EQ8WY54 764 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 ISL2Q96A47 359 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 ARPC5LQ9BPX5 153 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 PAGR1Q9BTK6 254 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 ARNT2Q9HBZ2 717 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 PCMTD2Q9NV79 361 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 CACNA2D2Q9NY47 1150 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 ANAPC4Q9UJX5 808 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 SUPT16HQ9Y5B9 1047 aaKnown RBP5.75□□□□□ -1.49
CD44-202ENST00000278385 PCDHB5Q9Y5E4 795 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 CAMSAP2Q08AD1 1489 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 RIMS1Q86UR5 1692 aaKnown RBP5.75□□□□□ -1.49
CD44-202ENST00000278385 KIDINS220Q9ULH0 1771 aa5.75□□□□□ -1.49
CD44-202ENST00000278385 ABCA6Q8N139 1617 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 EPB41L2O43491 1005 aaKnown RBP5.74□□□□□ -1.49
CD44-202ENST00000278385 TSPAN6O43657 245 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 KRT18P05783 430 aaKnown RBP5.74□□□□□ -1.49
CD44-202ENST00000278385 COL6A1P12109 1028 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 RASA3Q14644 834 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 MAPRE1Q15691 268 aaKnown RBP5.74□□□□□ -1.49
CD44-202ENST00000278385 CWF19L2Q2TBE0 894 aaKnown RBP5.74□□□□□ -1.49
CD44-202ENST00000278385 SYCP2LQ5T4T6 812 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 ZBTB37Q5TC79 503 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 LRFN4Q6PJG9 635 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 OGFOD3Q6PK18 319 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 MPRIPQ6WCQ1 1025 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 NBPF11Q86T75 865 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 GOLM1Q8NBJ4 401 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 GPRASP2Q96D09 838 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 DEPDC7Q96QD5 511 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 INO80BQ9C086 356 aaPredicted RBP5.74□□□□□ -1.49
CD44-202ENST00000278385 WNT10AQ9GZT5 417 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 ZNF700Q9H0M5 742 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 KANSL2Q9H9L4 492 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 LRRC4CQ9HCJ2 640 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 KBTBD4Q9NVX7 518 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 GTF2IRD1Q9UHL9 959 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 PCDHGC5Q9Y5F6 944 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 SUPT6HQ7KZ85 1726 aaKnown RBP5.74□□□□□ -1.49
CD44-202ENST00000278385 SIGLEC1Q9BZZ2 1709 aa5.74□□□□□ -1.49
CD44-202ENST00000278385 ROBO2Q9HCK4 1378 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms