RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 EIF2S2P20042 333 aaKnown RBP3.44□□□□□ -1.86
HERC4-201ENST00000277817 GRAMD1BQ3KR37 738 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 CCDC174Q6PII3 467 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 ZNF511Q8NB15 262 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 MYRIPQ8NFW9 859 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 MENTQ9BUN1 341 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 NBPF3Q9H094 633 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 PRDM9Q9NQV7 894 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 UBP1Q9NZI7 540 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 CHMP3Q9Y3E7 222 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 PCDHB11Q9Y5F2 797 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 A0A1W2PQH9 124 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 NPHP1O15259 732 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 RBM6P78332 1123 aaKnown RBP3.44□□□□□ -1.86
HERC4-201ENST00000277817 EXOSC9Q06265 439 aaKnown RBP3.44□□□□□ -1.86
HERC4-201ENST00000277817 IDI1Q13907 227 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 SEPT7Q16181 437 aaKnown RBP3.44□□□□□ -1.86
HERC4-201ENST00000277817 EPM2AIP1Q7L775 607 aaPredicted RBP3.44□□□□□ -1.86
HERC4-201ENST00000277817 VPS9D1Q9Y2B5 631 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 LUC7L2Q9Y383 392 aaKnown RBP3.44□□□□□ -1.86
HERC4-201ENST00000277817 DDX49Q9Y6V7 483 aaKnown RBP3.44□□□□□ -1.86
HERC4-201ENST00000277817 YBX3P16989 372 aaKnown RBP eCLIP3.44□□□□□ -1.86
HERC4-201ENST00000277817 GRM5P41594 1212 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 USP14P54578 494 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 ZRSR2Q15696 482 aaKnown RBP3.44□□□□□ -1.86
HERC4-201ENST00000277817 PDE12Q6L8Q7 609 aaKnown RBP3.44□□□□□ -1.86
HERC4-201ENST00000277817 ZSWIM2Q8NEG5 633 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 C22orf23Q9BZE7 217 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 ACTR10Q9NZ32 417 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 TPX2Q9ULW0 747 aaKnown RBP3.44□□□□□ -1.86
HERC4-201ENST00000277817 FRAT2O75474 233 aaPredicted RBP3.44□□□□□ -1.86
HERC4-201ENST00000277817 GSTT1P30711 240 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 INPP5BP32019 993 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 APOBRQ0VD83 1088 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 SLC10A6Q3KNW5 377 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 C20orf194Q5TEA3 1177 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 RNF219Q5W0B1 726 aaPredicted RBP3.44□□□□□ -1.86
HERC4-201ENST00000277817 RSAD1Q9HA92 442 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 RASSF1Q9NS23 344 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 TMEM63CQ9P1W3 806 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 PDP2Q9P2J9 529 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 SUSD2Q9UGT4 822 aa3.44□□□□□ -1.86
HERC4-201ENST00000277817 HRO43593 1189 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 KATNA1O75449 491 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 PAPLNO95428 1278 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 ACRP10323 421 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 PTMSP20962 102 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 ITPKAP23677 461 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 CHMP4BP1P59074 171 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 CAMK2GQ13555 558 aaPredicted RBP3.43□□□□□ -1.86
HERC4-201ENST00000277817 MLC1Q15049 377 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 INTS6LQ5JSJ4 861 aaKnown RBP3.43□□□□□ -1.86
HERC4-201ENST00000277817 NUTM2GQ5VZR2 741 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 SAPCD2Q86UD0 394 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 HERPUD2Q9BSE4 406 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 NAA15Q9BXJ9 866 aaKnown RBP3.43□□□□□ -1.86
HERC4-201ENST00000277817 TRIM55Q9BYV6 548 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.43□□□□□ -1.868e-7■■■■■ 173.9
HERC4-201ENST00000277817 ARHGEF4Q9NR80 690 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 INTUQ9ULD6 942 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 GPR52Q9Y2T5 361 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 ABHD14A-ACY1A0A1B0GW23 586 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 A6NHS1 94 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 GNAI1P63096 354 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 CDC37Q16543 378 aaPredicted RBP3.43□□□□□ -1.86
HERC4-201ENST00000277817 GFOD2Q3B7J2 385 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 DMRTA1Q5VZB9 504 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 DZIP3Q86Y13 1208 aaKnown RBP3.43□□□□□ -1.86
HERC4-201ENST00000277817 ALDH16A1Q8IZ83 802 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 ZNF687Q8N1G0 1237 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 PRAM1Q96QH2 718 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 SPATA9Q9BWV2 254 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 MRPL4Q9BYD3 311 aaKnown RBP3.43□□□□□ -1.86
HERC4-201ENST00000277817 API5Q9BZZ5 524 aaKnown RBP3.43□□□□□ -1.86
HERC4-201ENST00000277817 PUS7LQ9H0K6 701 aaKnown RBP3.43□□□□□ -1.86
HERC4-201ENST00000277817 CABP1Q9NZU7 370 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 POLG2Q9UHN1 485 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 METRNQ9UJH8 293 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 RPLP1P05386 114 aaKnown RBP3.43□□□□□ -1.86
HERC4-201ENST00000277817 EPB42P16452 691 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 PRKAR2BP31323 418 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 LIG3P49916 1009 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 GUCY2FP51841 1108 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 KRT83P78385 493 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 KIAA2012Q0VF49 1180 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 ALFQ53S48 1182 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 SNX29Q8TEQ0 813 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 GATAD2BQ8WXI9 593 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 CNTNAP3BQ96NU0 1288 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 CNTNAP3Q9BZ76 1288 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 DISC1Q9NRI5 854 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 CHMP5Q9NZZ3 219 aa3.43□□□□□ -1.86
HERC4-201ENST00000277817 NOB1Q9ULX3 412 aaKnown RBP3.43□□□□□ -1.86
HERC4-201ENST00000277817 GPC6Q9Y625 555 aaPredicted RBP3.43□□□□□ -1.86
HERC4-201ENST00000277817 PF4P02776 101 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 CHAF1AQ13111 956 aaPredicted RBP3.42□□□□□ -1.86
HERC4-201ENST00000277817 PDE3AQ14432 1141 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 KIAA1614Q5VZ46 1190 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 SCARA3Q6AZY7 606 aa3.42□□□□□ -1.86
HERC4-201ENST00000277817 TEX19Q8NA77 164 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms