RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 CDC42BPGQ6DT37 1551 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 PABPN1LA6NDY0 278 aaKnown RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 XRCC5P13010 732 aaKnown RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 NPR1P16066 1061 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 TNNI1P19237 187 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 TRAPPC10P48553 1259 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 RBM6P78332 1123 aaKnown RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 XKR9Q5GH70 373 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 SYMPKQ92797 1274 aaKnown RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 STMN4Q9H169 189 aaPredicted RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 PCDHA5Q9Y5H7 936 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 SOS2Q07890 1332 aaPredicted RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 FMNL1O95466 1100 aaPredicted RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 PABPC4Q13310 644 aaKnown RBP eCLIP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 LONRF3Q496Y0 759 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 CCDC93Q567U6 631 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 FAM178BQ8IXR5 827 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 RASGRP4Q8TDF6 673 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 MAK16Q9BXY0 300 aaKnown RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 DHX36Q9H2U1 1008 aaKnown RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 ARMCX3Q9UH62 379 aaPredicted RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 GNA14O95837 355 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 CYP2J2P51589 502 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 FAM26FQ5R3K3 315 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 CFAP58Q5T655 872 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 SFMBT2Q5VUG0 894 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 GADL1Q6ZQY3 521 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 KRT26Q7Z3Y9 468 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 OR8K1Q8NGG5 319 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 ERO1AQ96HE7 468 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
USP6NL-201ENST00000277575 NUCKS1Q9H1E3 243 aaKnown RBP12.49□□□□□ -0.41
USP6NL-201ENST00000277575 SMIM23A6NLE4 172 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 GDF11O95390 407 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 KRT19P08727 400 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 LIFRP42702 1097 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 ARHGAP44Q17R89 818 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 OTUD6BQ8N6M0 293 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 DYNLL2Q96FJ2 89 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 USP31Q70CQ4 1352 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 GLI2P10070 1586 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 SH2B2O14492 632 aaPredicted RBP12.49□□□□□ -0.41
USP6NL-201ENST00000277575 KCTD1Q719H9 257 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 GPT2Q8TD30 523 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.49□□□□□ -0.41
USP6NL-201ENST00000277575 CARD6Q9BX69 1037 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 KCNJ18B7U540 433 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 CYP19A1P11511 503 aaPredicted RBP12.49□□□□□ -0.41
USP6NL-201ENST00000277575 ADKP55263 362 aaKnown RBP12.49□□□□□ -0.41
USP6NL-201ENST00000277575 MORC3Q14149 939 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 KCNJ12Q14500 433 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 FAM102BQ5T8I3 360 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 UTP14CQ5TAP6 766 aaKnown RBP12.49□□□□□ -0.41
USP6NL-201ENST00000277575 ARFGAP2Q8N6H7 521 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 TRERF1Q96PN7 1200 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 TEKT3Q9BXF9 490 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 COA1Q9GZY4 146 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 FANCLQ9NW38 375 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 PI4KBQ9UBF8 816 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 SSX2IPQ9Y2D8 614 aa12.49□□□□□ -0.41
USP6NL-201ENST00000277575 SLC16A2P36021 539 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 TUBB2AQ13885 445 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 DCUN1D2Q6PH85 259 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 SREK1Q8WXA9 508 aaKnown RBP12.48□□□□□ -0.41
USP6NL-201ENST00000277575 GPR101Q96P66 508 aaPredicted RBP12.48□□□□□ -0.41
USP6NL-201ENST00000277575 TUBB2BQ9BVA1 445 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 CSRNP2Q9H175 543 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 SLC5A4Q9NY91 659 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 TXNDC16Q9P2K2 825 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 AGTPBP1Q9UPW5 1226 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 TNS3Q68CZ2 1445 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 AFF2P51816 1311 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 KIF23Q02241 960 aaPredicted RBP12.48□□□□□ -0.41
USP6NL-201ENST00000277575 NR5A1Q13285 461 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 C8orf74Q6P047 294 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 SLC39A2Q9NP94 309 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 POLR3EQ9NVU0 708 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 PNPLA6Q8IY17 1366 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 TYW1BQ6NUM6 668 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 USP17L2Q6R6M4 530 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 NCAPG2Q86XI2 1143 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.48□□□□□ -0.41
USP6NL-201ENST00000277575 PANK4Q9NVE7 773 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 PCDHA4Q9UN74 947 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 ATF5Q9Y2D1 282 aaPredicted RBP12.48□□□□□ -0.41
USP6NL-201ENST00000277575 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
USP6NL-201ENST00000277575 RPN1P04843 607 aaKnown RBP12.47□□□□□ -0.41
USP6NL-201ENST00000277575 STAT1P42224 750 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 METTL13Q8N6R0 699 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 UBL4BQ8N7F7 174 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 IQCDQ96DY2 449 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 EEF2KMTQ96G04 330 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 CEP104O60308 925 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 BMP3P12645 472 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 ATP2A2P16615 1042 aaKnown RBP12.47□□□□□ -0.41
USP6NL-201ENST00000277575 LRMPQ12912 555 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 TTLL6Q8N841 843 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 PSMB7Q99436 277 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 MINPP1Q9UNW1 487 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms