RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 CREB3O43889 395 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 INHBAP08476 426 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 HOXA7P31268 230 aaPredicted RBP9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 SEPT2Q15019 361 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 AOC3Q16853 763 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 OTUD7BQ6GQQ9 843 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 GALNT17Q6IS24 598 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 RINT1Q6NUQ1 792 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 RAB44Q7Z6P3 723 aaPredicted RBP9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 KLHDC4Q8TBB5 520 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 PPP1R13BQ96KQ4 1090 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 KIFC3Q9BVG8 833 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 BLZF1Q9H2G9 400 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 ATP8A2Q9NTI2 1148 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 FAM8A1Q9UBU6 413 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 DYNC1I2Q13409 638 aaKnown RBP9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 PARP10Q53GL7 1025 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 RETREG2Q8NC44 543 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 ARMT1Q9H993 441 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 KIAA0586Q9BVV6 1533 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 A0A1W2PQ27 194 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 A0A1W2PQ64 194 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 A0A1W2PQD8 194 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 CCDC151A5D8V7 595 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 LRRC43Q8N309 656 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 ZC4H2Q9NQZ6 224 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 MID2Q9UJV3 735 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 GUCY2CP25092 1073 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 MAP7D3Q8IWC1 876 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 REXO1Q8N1G1 1221 aaKnown RBP9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 ABTB1Q969K4 478 aaPredicted RBP9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 DCAF5Q96JK2 942 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 TPCN1Q9ULQ1 816 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 PALM3A6NDB9 673 aaPredicted RBP9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 S100BP04271 92 aaPredicted RBP9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 EIF3BP55884 814 aaKnown RBP9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 BSPRYQ5W0U4 402 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 OTUD6AQ7L8S5 288 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 HDAC11Q96DB2 347 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 SERPINI1Q99574 410 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 IFT122Q9HBG6 1241 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 TNNQ9UQP3 1299 aa9.52□□□□□ -0.89
SCUBE3-201ENST00000274938 FRMD3A2A2Y4 597 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 RPSAP08865 295 aaKnown RBP9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 BPIFB4P59827 614 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 C1orf112Q9NSG2 853 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 CDK13Q14004 1512 aaKnown RBP9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 ABCB4P21439 1286 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 EEF1DP29692 281 aaKnown RBP9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 KRT80Q6KB66 452 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 NOSTRINQ8IVI9 506 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 HACE1Q8IYU2 909 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 TSPYL6Q8N831 410 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 TCP11Q8WWU5 503 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 NOP53Q9NZM5 478 aaKnown RBP9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 ARHGEF11O15085 1522 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 BUB1O43683 1085 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 TNNI1P19237 187 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 SLC39A6Q13433 755 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 PLBD2Q8NHP8 589 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 RBM17Q96I25 401 aaKnown RBP9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 SBNO1A3KN83 1393 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 INSRP06213 1382 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 SNAPC4Q5SXM2 1469 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 NME8Q8N427 588 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 SYNJ1O43426 1573 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 POLE2P56282 527 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 YWHAGP61981 247 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 MMS22LQ6ZRQ5 1243 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 TSC22D3Q99576 134 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 IKBKBO14920 756 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 KRT19P08727 400 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 E2F5Q15329 346 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 HOOK2Q96ED9 719 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 XAGE2Q96GT9 111 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 CUEDC2Q9H467 287 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 TBC1D7Q9P0N9 293 aa9.51□□□□□ -0.89
SCUBE3-201ENST00000274938 KIF14Q15058 1648 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 NOP56O00567 594 aaKnown RBP9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 PFKFB2O60825 505 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 HIBADHP31937 336 aaKnown RBP9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 CDR2Q01850 454 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 IDI1Q13907 227 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 SRRM1Q8IYB3 904 aaKnown RBP9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 METTL22Q9BUU2 404 aaPredicted RBP9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 ZNF148Q9UQR1 794 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 PPIP5K1Q6PFW1 1433 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 GNGT2O14610 69 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 PYGBP11216 843 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 ATF7P17544 494 aaPredicted RBP9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 TMED1Q13445 227 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 PRPSAP1Q14558 356 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 PPP2R5AQ15172 486 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 NBPF9Q3BBW0 867 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 GPBP1Q86WP2 473 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 FNBP4Q8N3X1 1017 aaPredicted RBP9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 TRIM15Q9C019 465 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 NACA2Q9H009 215 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms