RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 KRT19P08727 400 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 NBPF10Q6P3W6 841 aaKnown RBP14.49□□□□□ -0.09
PRDM16-201ENST00000270722 MLXIPQ9HAP2 919 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 DHX9Q08211 1270 aaKnown RBP14.49□□□□□ -0.09
PRDM16-201ENST00000270722 KRT81Q14533 505 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 CHRNA2Q15822 529 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 SLFN12Q8IYM2 578 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 CNKSR1Q969H4 720 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.49□□□□□ -0.09
PRDM16-201ENST00000270722 TMC4Q7Z404 712 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 RUNDC3BQ96NL0 473 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 MAP3K5Q99683 1374 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 TMED10P49755 219 aaKnown RBP14.49□□□□□ -0.09
PRDM16-201ENST00000270722 MMS22LQ6ZRQ5 1243 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 MRPL11Q9Y3B7 192 aaKnown RBP14.49□□□□□ -0.09
PRDM16-201ENST00000270722 GAS7O60861 476 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 TNNI1P19237 187 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 CALCRLQ16602 461 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 FAM71BQ8TC56 605 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 CC2D2AQ9P2K1 1620 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 RIMBP2O15034 1052 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 RINT1Q6NUQ1 792 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 RAB44Q7Z6P3 723 aaPredicted RBP14.49□□□□□ -0.09
PRDM16-201ENST00000270722 MRPL44Q9H9J2 332 aaKnown RBP14.49□□□□□ -0.09
PRDM16-201ENST00000270722 ANGEL1Q9UNK9 670 aaKnown RBP14.49□□□□□ -0.09
PRDM16-201ENST00000270722 GARSP41250 739 aaKnown RBP14.49□□□□□ -0.09
PRDM16-201ENST00000270722 ATP8B2P98198 1209 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 CDHR1Q96JP9 859 aa14.49□□□□□ -0.09
PRDM16-201ENST00000270722 NSMFQ6X4W1 530 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 IQSEC3Q9UPP2 1182 aaPredicted RBP14.48□□□□□ -0.09
PRDM16-201ENST00000270722 KIAA1841Q6NSI8 718 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 TSC1Q92574 1164 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 MBIPQ9NS73 344 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 GALNT17Q6IS24 598 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 TRIM42Q8IWZ5 723 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 C14orf93Q9H972 538 aaKnown RBP14.48□□□□□ -0.09
PRDM16-201ENST00000270722 TMEM247A6NEH6 219 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 MAN1A1P33908 653 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 EFHD2Q96C19 240 aaPredicted RBP14.48□□□□□ -0.09
PRDM16-201ENST00000270722 MED10Q9BTT4 135 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 ANGPTL3Q9Y5C1 460 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 CFAP221Q4G0U5 840 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 OLFM3Q96PB7 478 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 PDE4DQ08499 809 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 TRIM55Q9BYV6 548 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 AP5M1Q9H0R1 490 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 C1orf112Q9NSG2 853 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 SCHIP1Q9P0W5 487 aaPredicted RBP14.48□□□□□ -0.09
PRDM16-201ENST00000270722 YTHDC2Q9H6S0 1430 aaKnown RBP14.48□□□□□ -0.09
PRDM16-201ENST00000270722 PDE8AO60658 829 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 NBPF9Q3BBW0 867 aa14.48□□□□□ -0.09
PRDM16-201ENST00000270722 VWA3AA6NCI4 1184 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 DMP1Q13316 513 aaPredicted RBP14.47□□□□□ -0.09
PRDM16-201ENST00000270722 SLC13A4Q9UKG4 626 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 KDM5BQ9UGL1 1544 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 PDE1AP54750 535 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 MYCT1Q8N699 235 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 AOPEPQ8N6M6 819 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 MLKLQ8NB16 471 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 SPDYE1Q8NFV5 336 aaPredicted RBP14.47□□□□□ -0.09
PRDM16-201ENST00000270722 WDR64B1ANS9 1081 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 PCP11498 1178 aaKnown RBP14.47□□□□□ -0.09
PRDM16-201ENST00000270722 PAK2Q13177 524 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 EAPPQ56P03 285 aaPredicted RBP14.47□□□□□ -0.09
PRDM16-201ENST00000270722 RETREG2Q8NC44 543 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 C10orf88Q9H8K7 445 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 ANLNQ9NQW6 1124 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 KRT15P19012 456 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 METTL23Q86XA0 190 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 ANKRD44Q8N8A2 993 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 LRFN2Q9ULH4 789 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 RRP15Q9Y3B9 282 aaKnown RBP14.47□□□□□ -0.09
PRDM16-201ENST00000270722 CSGALNACT2Q8N6G5 542 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 ATP8A2Q9NTI2 1148 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 STAM2O75886 525 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 DENND2CQ68D51 928 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 TMTC1Q8IUR5 882 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 SKA2Q8WVK7 121 aaPredicted RBP14.47□□□□□ -0.09
PRDM16-201ENST00000270722 ESYT1Q9BSJ8 1104 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 CPSF3Q9UKF6 684 aaKnown RBP14.47□□□□□ -0.09
PRDM16-201ENST00000270722 F13A1P00488 732 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 PRKG1Q13976 671 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 HERC4Q5GLZ8 1057 aaPredicted RBP14.47□□□□□ -0.09
PRDM16-201ENST00000270722 VSIG1Q86XK7 387 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 METTL13Q8N6R0 699 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 PPP2R3CQ969Q6 453 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 NRBP2Q9NSY0 501 aa14.47□□□□□ -0.09
PRDM16-201ENST00000270722 RWDD2BP57060 319 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 RNF40O75150 1001 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 ATP2B4P23634 1241 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 SUPT20HL1Q3ZLR7 823 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 XRCC5P13010 732 aaKnown RBP14.46□□□□□ -0.09
PRDM16-201ENST00000270722 ANKRD20A4Q4UJ75 823 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 ANKRD20A8PQ5CZ79 823 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 ANKRD20A2Q5SQ80 823 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 ANKRD20A1Q5TYW2 823 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 PPP4R4Q6NUP7 873 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 CCDC80Q76M96 950 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 TLK2Q86UE8 772 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 TEX12Q9BXU0 123 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms