RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 MPHOSPH10O00566 681 aaKnown RBP18.97■□□□□ 0.63
CCDC40-201ENST00000269318 MCM7P33993 719 aa18.97■□□□□ 0.63
CCDC40-201ENST00000269318 NAPAP54920 295 aa18.97■□□□□ 0.63
CCDC40-201ENST00000269318 IL17AQ16552 155 aa18.97■□□□□ 0.63
CCDC40-201ENST00000269318 PPP4R3BQ5MIZ7 849 aa18.97■□□□□ 0.63
CCDC40-201ENST00000269318 LARGE2Q8N3Y3 721 aa18.97■□□□□ 0.63
CCDC40-201ENST00000269318 SYMPKQ92797 1274 aaKnown RBP18.97■□□□□ 0.63
CCDC40-201ENST00000269318 VPS33BQ9H267 617 aa18.97■□□□□ 0.63
CCDC40-201ENST00000269318 VAT1LQ9HCJ6 419 aa18.97■□□□□ 0.63
CCDC40-201ENST00000269318 PCDHA5Q9Y5H7 936 aa18.97■□□□□ 0.63
CCDC40-201ENST00000269318 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.97■□□□□ 0.63
CCDC40-201ENST00000269318 ESYT2A0FGR8 921 aa18.96■□□□□ 0.63
CCDC40-201ENST00000269318 hCG_1984214I3L0E3 225 aa18.96■□□□□ 0.63
CCDC40-201ENST00000269318 POSTNQ15063 836 aa18.96■□□□□ 0.63
CCDC40-201ENST00000269318 NT5DC1Q5TFE4 455 aa18.96■□□□□ 0.63
CCDC40-201ENST00000269318 ARL6IP4Q66PJ3 421 aaKnown RBP18.96■□□□□ 0.63
CCDC40-201ENST00000269318 ZSCAN29Q8IWY8 852 aaPredicted RBP18.96■□□□□ 0.63
CCDC40-201ENST00000269318 ZNF713Q8N859 430 aaPredicted RBP18.96■□□□□ 0.63
CCDC40-201ENST00000269318 HOOK1Q9UJC3 728 aaKnown RBP18.96■□□□□ 0.63
CCDC40-201ENST00000269318 VWA3AA6NCI4 1184 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 PSMD14O00487 310 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 SHROOM1Q2M3G4 852 aaPredicted RBP18.95■□□□□ 0.62
CCDC40-201ENST00000269318 CERKLQ49MI3 558 aaPredicted RBP18.95■□□□□ 0.62
CCDC40-201ENST00000269318 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.95■□□□□ 0.62
CCDC40-201ENST00000269318 PDILTQ8N807 584 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 MKL1Q969V6 931 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 TRIM5Q9C035 493 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 MYH4Q9Y623 1939 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 SMCO2A6NFE2 343 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 SPDYE2BA6NHP3 402 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 RAD17O75943 681 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 SPDYE6P0CI01 402 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 GNA11P29992 359 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 KANK3Q6NY19 840 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 C6orf50Q9HD87 102 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 GPCPD1Q9NPB8 672 aa18.95■□□□□ 0.62
CCDC40-201ENST00000269318 ZNF500O60304 480 aaPredicted RBP18.94■□□□□ 0.62
CCDC40-201ENST00000269318 PRR29P0C7W0 189 aa18.94■□□□□ 0.62
CCDC40-201ENST00000269318 SARSP49591 514 aaKnown RBP18.94■□□□□ 0.62
CCDC40-201ENST00000269318 NCAPHQ15003 741 aa18.94■□□□□ 0.62
CCDC40-201ENST00000269318 INF2Q27J81 1249 aa18.94■□□□□ 0.62
CCDC40-201ENST00000269318 GPATCH4Q5T3I0 446 aaKnown RBP18.94■□□□□ 0.62
CCDC40-201ENST00000269318 NYAP2Q9P242 653 aa18.94■□□□□ 0.62
CCDC40-201ENST00000269318 TGFB2P61812 414 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 SOGA3Q5TF21 947 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 ISM2Q6H9L7 571 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 KRT25Q7Z3Z0 450 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 SIAH1Q8IUQ4 282 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 SPATA20Q8TB22 786 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 KANSL2Q9H9L4 492 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 JMJD4Q9H9V9 463 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 SLFN14P0C7P3 912 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 EEF2P13639 858 aaKnown RBP18.93■□□□□ 0.62
CCDC40-201ENST00000269318 BMP6P22004 513 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 CDC25BP30305 580 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 TTBK2Q6IQ55 1244 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 SH3RF1Q7Z6J0 888 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 SPC24Q8NBT2 197 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 DHX58Q96C10 678 aa18.93■□□□□ 0.62
CCDC40-201ENST00000269318 IKBKBO14920 756 aa18.92■□□□□ 0.62
CCDC40-201ENST00000269318 ZBTB7AO95365 584 aa18.92■□□□□ 0.62
CCDC40-201ENST00000269318 ATP2B2Q01814 1243 aa18.92■□□□□ 0.62
CCDC40-201ENST00000269318 TMEM179Q6ZVK1 233 aa18.92■□□□□ 0.62
CCDC40-201ENST00000269318 GRAMD1CQ8IYS0 662 aa18.92■□□□□ 0.62
CCDC40-201ENST00000269318 ADGRF4Q8IZF3 695 aa18.92■□□□□ 0.62
CCDC40-201ENST00000269318 MTMR8Q96EF0 704 aa18.92■□□□□ 0.62
CCDC40-201ENST00000269318 MRFAP1L1Q96HT8 127 aa18.92■□□□□ 0.62
CCDC40-201ENST00000269318 ZNF830Q96NB3 372 aaPredicted RBP18.92■□□□□ 0.62
CCDC40-201ENST00000269318 TRIM34Q9BYJ4 488 aa18.92■□□□□ 0.62
CCDC40-201ENST00000269318 PIM2Q9P1W9 311 aa18.92■□□□□ 0.62
CCDC40-201ENST00000269318 MAN1B1Q9UKM7 699 aa18.92■□□□□ 0.62
CCDC40-201ENST00000269318 ZNRF3Q9ULT6 936 aa18.92■□□□□ 0.62
CCDC40-201ENST00000269318 TTC12Q9H892 705 aaPredicted RBP18.92■□□□□ 0.62
CCDC40-201ENST00000269318 PNMA6FA0A0J9YX94 578 aa18.91■□□□□ 0.62
CCDC40-201ENST00000269318 GOLGA6L6A8MZA4 724 aa18.91■□□□□ 0.62
CCDC40-201ENST00000269318 PPP1R11O60927 126 aaPredicted RBP18.91■□□□□ 0.62
CCDC40-201ENST00000269318 LONP1P36776 959 aaKnown RBP18.91■□□□□ 0.62
CCDC40-201ENST00000269318 SEPT2Q15019 361 aa18.91■□□□□ 0.62
CCDC40-201ENST00000269318 NONOQ15233 471 aaKnown RBP eCLIP18.91■□□□□ 0.62
CCDC40-201ENST00000269318 E2F4Q16254 413 aa18.91■□□□□ 0.62
CCDC40-201ENST00000269318 CCDC125Q86Z20 511 aa18.91■□□□□ 0.62
CCDC40-201ENST00000269318 TMEM60Q9H2L4 133 aa18.91■□□□□ 0.62
CCDC40-201ENST00000269318 HDAC9Q9UKV0 1011 aa18.91■□□□□ 0.62
CCDC40-201ENST00000269318 ZBTB12Q9Y330 459 aaPredicted RBP18.91■□□□□ 0.62
CCDC40-201ENST00000269318 SMTNL1A8MU46 457 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 TPM3P06753 285 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 MORC3Q14149 939 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 CCDC96Q2M329 555 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 ABCB5Q2M3G0 1257 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 PPP1R18Q6NYC8 613 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 KCTD1Q719H9 257 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 NIM1KQ8IY84 436 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 REXO1Q8N1G1 1221 aaKnown RBP18.9■□□□□ 0.62
CCDC40-201ENST00000269318 DCAF4Q8WV16 495 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 COA7Q96BR5 231 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 PAGE5Q96GU1 130 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 CSRNP1Q96S65 589 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 ZNF70Q9UC06 446 aaPredicted RBP18.9■□□□□ 0.62
CCDC40-201ENST00000269318 LAD1O00515 517 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 GDF11O95390 407 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms