RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 PDHBP11177 359 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 ZNF157P51786 506 aaPredicted RBP17.65■□□□□ 0.42
COPS3-201ENST00000268717 MAP2K1Q02750 393 aaPredicted RBP17.65■□□□□ 0.42
COPS3-201ENST00000268717 TTLL12Q14166 644 aaPredicted RBP17.65■□□□□ 0.42
COPS3-201ENST00000268717 CERKLQ49MI3 558 aaPredicted RBP17.65■□□□□ 0.42
COPS3-201ENST00000268717 GALNT17Q6IS24 598 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 TMEM179Q6ZVK1 233 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 GAS2L3Q86XJ1 694 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 ZNF713Q8N859 430 aaPredicted RBP17.65■□□□□ 0.42
COPS3-201ENST00000268717 CCDC102AQ96A19 550 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 SHISA4Q96DD7 197 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 KANSL2Q9H9L4 492 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.65■□□□□ 0.42
COPS3-201ENST00000268717 NYAP2Q9P242 653 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 CLIC4Q9Y696 253 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 SYCE3A1L190 88 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 TCP10L2B9ZVM9 353 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 KLRF2D3W0D1 207 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 ME1P48163 572 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 CEBPZQ03701 1054 aaKnown RBP17.65■□□□□ 0.42
COPS3-201ENST00000268717 NOGQ13253 232 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 NBPF12Q5TAG4 269 aaPredicted RBP17.65■□□□□ 0.42
COPS3-201ENST00000268717 CCDC148Q8NFR7 591 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 GRPEL1Q9HAV7 217 aa17.65■□□□□ 0.42
COPS3-201ENST00000268717 LIG1P18858 919 aa17.64■□□□□ 0.41
COPS3-201ENST00000268717 TNNI2P48788 182 aa17.64■□□□□ 0.41
COPS3-201ENST00000268717 PRKG1Q13976 671 aa17.64■□□□□ 0.41
COPS3-201ENST00000268717 PTPAQ15257 358 aa17.64■□□□□ 0.41
COPS3-201ENST00000268717 SF3A1Q15459 793 aaKnown RBP17.64■□□□□ 0.41
COPS3-201ENST00000268717 NPY5RQ15761 445 aa17.64■□□□□ 0.41
COPS3-201ENST00000268717 SUPT20HL1Q3ZLR7 823 aa17.64■□□□□ 0.41
COPS3-201ENST00000268717 GPATCH4Q5T3I0 446 aaKnown RBP17.64■□□□□ 0.41
COPS3-201ENST00000268717 CSRNP1Q96S65 589 aa17.64■□□□□ 0.41
COPS3-201ENST00000268717 PCDHA7Q9UN72 937 aa17.64■□□□□ 0.41
COPS3-201ENST00000268717 CYTH3O43739 400 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 TBC1D12O60347 775 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 SLC10A3P09131 477 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 MAP3K11Q16584 847 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 ARMC9Q7Z3E5 817 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 DAGLBQ8NCG7 672 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 CCDC12Q8WUD4 166 aaPredicted RBP17.63■□□□□ 0.41
COPS3-201ENST00000268717 TNFRSF25Q93038 417 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 TEPSINQ96N21 525 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 ZIC5Q96T25 663 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 TMEM39BQ9GZU3 492 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 NUP62CLQ9H1M0 184 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 RIOX1Q9H6W3 641 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 BARHL2Q9NY43 387 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 DACT1Q9NYF0 836 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 CLIP2Q9UDT6 1046 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 FZD1Q9UP38 647 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 CEP131Q9UPN4 1083 aa17.63■□□□□ 0.41
COPS3-201ENST00000268717 MPHOSPH10O00566 681 aaKnown RBP17.62■□□□□ 0.41
COPS3-201ENST00000268717 PPP1R12BO60237 982 aaPredicted RBP17.62■□□□□ 0.41
COPS3-201ENST00000268717 BMP15O95972 392 aa17.62■□□□□ 0.41
COPS3-201ENST00000268717 TRAPPC10P48553 1259 aa17.62■□□□□ 0.41
COPS3-201ENST00000268717 SLC35G1Q2M3R5 365 aa17.62■□□□□ 0.41
COPS3-201ENST00000268717 CCDC73Q6ZRK6 1079 aa17.62■□□□□ 0.41
COPS3-201ENST00000268717 RBM43Q6ZSC3 357 aaKnown RBP17.62■□□□□ 0.41
COPS3-201ENST00000268717 RASAL3Q86YV0 1011 aa17.62■□□□□ 0.41
COPS3-201ENST00000268717 MRPS27Q92552 414 aaKnown RBP17.62■□□□□ 0.41
COPS3-201ENST00000268717 CLSTN2Q9H4D0 955 aa17.62■□□□□ 0.41
COPS3-201ENST00000268717 OTOFQ9HC10 1997 aa17.62■□□□□ 0.41
COPS3-201ENST00000268717 hCG_1642624A0A1W2PR95 340 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 USP17L5A8MUK1 530 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 FOXN1O15353 648 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 FAM160A1Q05DH4 1040 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 ZNF543Q08ER8 600 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 NR5A1Q13285 461 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 LDLRAD1Q5T700 205 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 USP17L2Q6R6M4 530 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 CDAN1Q8IWY9 1227 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 CCAR1Q8IX12 1150 aaKnown RBP17.61■□□□□ 0.41
COPS3-201ENST00000268717 OXER1Q8TDS5 423 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 RRP36Q96EU6 259 aaKnown RBP17.61■□□□□ 0.41
COPS3-201ENST00000268717 NOL7Q9UMY1 257 aaKnown RBP17.61■□□□□ 0.41
COPS3-201ENST00000268717 FAM196BA6NMK8 535 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 TOB1P50616 345 aaPredicted RBP17.61■□□□□ 0.41
COPS3-201ENST00000268717 NLRP5P59047 1200 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 MAP3K10Q02779 954 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 ABCB5Q2M3G0 1257 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 AXDND1Q5T1B0 1012 aaPredicted RBP17.61■□□□□ 0.41
COPS3-201ENST00000268717 ENGASEQ8NFI3 743 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 DCAF4Q8WV16 495 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 TSPY26PQ9H489 355 aa17.61■□□□□ 0.41
COPS3-201ENST00000268717 BAZ2BQ9UIF8 2168 aaKnown RBP17.61■□□□□ 0.41
COPS3-201ENST00000268717 FAM237AA0A1B0GTK4 181 aa17.6■□□□□ 0.41
COPS3-201ENST00000268717 CTAGE5O15320 804 aa17.6■□□□□ 0.41
COPS3-201ENST00000268717 NR1I2O75469 434 aa17.6■□□□□ 0.41
COPS3-201ENST00000268717 CMA1P23946 247 aa17.6■□□□□ 0.41
COPS3-201ENST00000268717 ICA1Q05084 483 aa17.6■□□□□ 0.41
COPS3-201ENST00000268717 LRRC47Q8N1G4 583 aaKnown RBP17.6■□□□□ 0.41
COPS3-201ENST00000268717 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.6■□□□□ 0.41
COPS3-201ENST00000268717 CABP5Q9NP86 173 aa17.6■□□□□ 0.41
COPS3-201ENST00000268717 SEC63Q9UGP8 760 aaKnown RBP17.6■□□□□ 0.41
COPS3-201ENST00000268717 PCDHA4Q9UN74 947 aa17.6■□□□□ 0.41
COPS3-201ENST00000268717 ESYT2A0FGR8 921 aa17.59■□□□□ 0.41
COPS3-201ENST00000268717 STXBP3O00186 592 aa17.59■□□□□ 0.41
COPS3-201ENST00000268717 CUTAO60888 179 aa17.59■□□□□ 0.41
COPS3-201ENST00000268717 XRCC6P12956 609 aaKnown RBP eCLIP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms