RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 CREG2Q8IUH2 290 aa17.24■□□□□ 0.35
SCAMP2-201ENST00000268099 TSEN2Q8NCE0 465 aaKnown RBP17.24■□□□□ 0.35
SCAMP2-201ENST00000268099 MAPK8IP1Q9UQF2 711 aa17.24■□□□□ 0.35
SCAMP2-201ENST00000268099 DUSP10Q9Y6W6 482 aa17.24■□□□□ 0.35
SCAMP2-201ENST00000268099 MACROD2A1Z1Q3 448 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 PES1O00541 588 aaKnown RBP17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 KRT2P35908 639 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 EPHB4P54760 987 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 DDR1Q08345 913 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 RRP12Q5JTH9 1297 aaKnown RBP17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 PDXDC2PQ6P474 469 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 MFSD6Q6ZSS7 791 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 ANKLE2Q86XL3 938 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 IFNL3Q8IZI9 196 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 FANCBQ8NB91 859 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 ZNF507Q8TCN5 953 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 NUP133Q8WUM0 1156 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 MTRQ99707 1265 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 JPH2Q9BR39 696 aaPredicted RBP17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 SNX12Q9UMY4 172 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 TCRBV5S4A2TA0A5A2 114 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 HSF2BPO75031 334 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 CABP4P57796 275 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 ITIH3Q06033 890 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 EMBQ6PCB8 327 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 ZNF572Q7Z3I7 529 aaPredicted RBP17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 GDAQ9Y2T3 454 aa17.23■□□□□ 0.35
SCAMP2-201ENST00000268099 PATL2C9JE40 543 aaKnown RBP17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 CYP27B1O15528 508 aa17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 A1BGP04217 495 aa17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 GPTP24298 496 aa17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 PRCPP42785 496 aa17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 PPARAQ07869 468 aa17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 ZNF174Q15697 407 aa17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 NHEJ1Q9H9Q4 299 aaPredicted RBP17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 RMND1Q9NWS8 449 aa17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 PDS5AQ29RF7 1337 aaKnown RBP17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 ERICH2A1L162 156 aa17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 XBP1P17861 261 aa17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 METTL24Q5JXM2 366 aa17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 CCDC170Q8IYT3 715 aa17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 ZNF654Q8IZM8 581 aa17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 ZNF512BQ96KM6 892 aaPredicted RBP17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 RNF26Q9BY78 433 aaPredicted RBP17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 ZNHIT6Q9NWK9 470 aaKnown RBP17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 IQSEC3Q9UPP2 1182 aaPredicted RBP17.22■□□□□ 0.35
SCAMP2-201ENST00000268099 TRIM49BA6NDI0 452 aa17.21■□□□□ 0.35
SCAMP2-201ENST00000268099 KIF1CO43896 1103 aaKnown RBP17.21■□□□□ 0.35
SCAMP2-201ENST00000268099 RPN1P04843 607 aaKnown RBP17.21■□□□□ 0.35
SCAMP2-201ENST00000268099 EEF1GP26641 437 aaKnown RBP17.21■□□□□ 0.35
SCAMP2-201ENST00000268099 SLC7A5Q01650 507 aa17.21■□□□□ 0.35
SCAMP2-201ENST00000268099 KIF5AQ12840 1032 aa17.21■□□□□ 0.35
SCAMP2-201ENST00000268099 SPATA4Q8NEY3 305 aa17.21■□□□□ 0.35
SCAMP2-201ENST00000268099 CAVIN3Q969G5 261 aa17.21■□□□□ 0.35
SCAMP2-201ENST00000268099 PHF20Q9BVI0 1012 aa17.21■□□□□ 0.35
SCAMP2-201ENST00000268099 SUFUQ9UMX1 484 aa17.21■□□□□ 0.35
SCAMP2-201ENST00000268099 DISP2A7MBM2 1401 aa17.21■□□□□ 0.35
SCAMP2-201ENST00000268099 ZEB2O60315 1214 aa17.21■□□□□ 0.34
SCAMP2-201ENST00000268099 ATP1A2P50993 1020 aa17.21■□□□□ 0.34
SCAMP2-201ENST00000268099 RCAN1P53805 252 aa17.21■□□□□ 0.34
SCAMP2-201ENST00000268099 ZC3H6P61129 1189 aaKnown RBP17.21■□□□□ 0.34
SCAMP2-201ENST00000268099 MRPS25P82663 173 aaKnown RBP17.21■□□□□ 0.34
SCAMP2-201ENST00000268099 IFIT5Q13325 482 aaKnown RBP17.21■□□□□ 0.34
SCAMP2-201ENST00000268099 MICALCLQ6ZW33 695 aa17.21■□□□□ 0.34
SCAMP2-201ENST00000268099 SH2D3CQ8N5H7 860 aa17.21■□□□□ 0.34
SCAMP2-201ENST00000268099 AGPAT5Q9NUQ2 364 aa17.21■□□□□ 0.34
SCAMP2-201ENST00000268099 ADAMTSL3P82987 1691 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 KDM4FA0A1W2PPD8 638 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 VAV2P52735 878 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 NAP1L1P55209 391 aaKnown RBP17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 ATP2C1P98194 919 aaPredicted RBP17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 CYP27A1Q02318 531 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 PTGDRQ13258 359 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 TCIRG1Q13488 830 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 TTC38Q5R3I4 469 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 TMTC2Q8N394 836 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 STAG1Q8WVM7 1258 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 TACO1Q9BSH4 297 aaKnown RBP17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 PAGR1Q9BTK6 254 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 TSGA10Q9BZW7 698 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 TTYH3Q9C0H2 523 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 STIM2Q9P246 746 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 NNTQ13423 1086 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 YTHDF3Q7Z739 585 aaKnown RBP17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 TRIM58Q8NG06 486 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 ZIM3Q96PE6 472 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 ORAI2Q96SN7 254 aa17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 PYM1Q9BRP8 204 aaKnown RBP17.2■□□□□ 0.34
SCAMP2-201ENST00000268099 MBD4O95243 580 aa17.19■□□□□ 0.34
SCAMP2-201ENST00000268099 TRIM21P19474 475 aaKnown RBP17.19■□□□□ 0.34
SCAMP2-201ENST00000268099 LSP1P33241 339 aa17.19■□□□□ 0.34
SCAMP2-201ENST00000268099 MATR3P43243 847 aaKnown RBP eCLIP17.19■□□□□ 0.34
SCAMP2-201ENST00000268099 DNM2P50570 870 aa17.19■□□□□ 0.34
SCAMP2-201ENST00000268099 PKN1Q16512 942 aa17.19■□□□□ 0.34
SCAMP2-201ENST00000268099 NAA35Q5VZE5 725 aa17.19■□□□□ 0.34
SCAMP2-201ENST00000268099 HAUS3Q68CZ6 603 aa17.19■□□□□ 0.34
SCAMP2-201ENST00000268099 KCTD16Q68DU8 428 aa17.19■□□□□ 0.34
SCAMP2-201ENST00000268099 KDM7AQ6ZMT4 941 aa17.19■□□□□ 0.34
SCAMP2-201ENST00000268099 EPN3Q9H201 632 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms