RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 MICALL2Q8IY33 904 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 DAGLBQ8NCG7 672 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 CCDC12Q8WUD4 166 aaPredicted RBP13.25□□□□□ -0.29
SCAF11-201ENST00000266589 M0R2N6 131 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 WNT7AO00755 349 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 CTAGE5O15320 804 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 SLFN13Q68D06 897 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 TTBK2Q6IQ55 1244 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 RASGRP4Q8TDF6 673 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 DCAF4Q8WV16 495 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 FBXO2Q9UK22 296 aaPredicted RBP13.24□□□□□ -0.29
SCAF11-201ENST00000266589 ZNF541Q9H0D2 1346 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 PTPREP23469 700 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 SLC16A2P36021 539 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 SLC1A4P43007 532 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 TRAPPC10P48553 1259 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 TNNI2P48788 182 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 TYRO3Q06418 890 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 RESP18Q5W5W9 173 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 ADGRF4Q8IZF3 695 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 ZMYND12Q9H0C1 365 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 PCDHA6Q9UN73 950 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 SCAF8Q9UPN6 1271 aaKnown RBP13.24□□□□□ -0.29
SCAF11-201ENST00000266589 PCDHA8Q9Y5H6 950 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 MRVI1Q9Y6F6 885 aa13.24□□□□□ -0.29
SCAF11-201ENST00000266589 DICER1Q9UPY3 1922 aaKnown RBP13.23□□□□□ -0.29
SCAF11-201ENST00000266589 CCDC194A0A1B0GVG4 234 aa13.23□□□□□ -0.29
SCAF11-201ENST00000266589 hCG_1984214I3L0E3 225 aa13.23□□□□□ -0.29
SCAF11-201ENST00000266589 ZNF202O95125 648 aa13.23□□□□□ -0.29
SCAF11-201ENST00000266589 BMP15O95972 392 aa13.23□□□□□ -0.29
SCAF11-201ENST00000266589 GRIN1Q05586 938 aa13.23□□□□□ -0.29
SCAF11-201ENST00000266589 ZNF174Q15697 407 aa13.23□□□□□ -0.29
SCAF11-201ENST00000266589 SAMD7Q7Z3H4 446 aa13.23□□□□□ -0.29
SCAF11-201ENST00000266589 ZNF713Q8N859 430 aaPredicted RBP13.23□□□□□ -0.29
SCAF11-201ENST00000266589 GMCL1P1Q8NEA9 526 aa13.23□□□□□ -0.29
SCAF11-201ENST00000266589 DPF2Q92785 391 aa13.23□□□□□ -0.29
SCAF11-201ENST00000266589 JMJD4Q9H9V9 463 aa13.23□□□□□ -0.29
SCAF11-201ENST00000266589 C6orf50Q9HD87 102 aa13.23□□□□□ -0.29
SCAF11-201ENST00000266589 CNOT7Q9UIV1 285 aaKnown RBP13.23□□□□□ -0.29
SCAF11-201ENST00000266589 HPSEQ9Y251 543 aa13.23□□□□□ -0.29
SCAF11-201ENST00000266589 SMCO2A6NFE2 343 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 TBC1D12O60347 775 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 GNA11P29992 359 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 SYKP43405 635 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 TBC1D10BQ4KMP7 808 aaPredicted RBP13.22□□□□□ -0.29
SCAF11-201ENST00000266589 SASS6Q6UVJ0 657 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 ARHGAP27Q6ZUM4 889 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 MIGA2Q7L4E1 593 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 ANP32BQ92688 251 aaKnown RBP13.22□□□□□ -0.29
SCAF11-201ENST00000266589 SDF4Q9BRK5 362 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 FHDC1Q9C0D6 1143 aaPredicted RBP13.22□□□□□ -0.29
SCAF11-201ENST00000266589 PGAP2Q9UHJ9 254 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 SRPRBQ9Y5M8 271 aaKnown RBP13.22□□□□□ -0.29
SCAF11-201ENST00000266589 MORC2Q9Y6X9 1032 aaPredicted RBP13.22□□□□□ -0.29
SCAF11-201ENST00000266589 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.22□□□□□ -0.29
SCAF11-201ENST00000266589 PNMA6FA0A0J9YX94 578 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 FAM237AA0A1B0GTK4 181 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 USP17L10C9JJH3 530 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 F5H6K3 240 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 KLRC3Q07444 240 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 TNFAIP1Q13829 316 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 RASA3Q14644 834 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 SPECC1Q5M775 1068 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 COA7Q96BR5 231 aa13.22□□□□□ -0.29
SCAF11-201ENST00000266589 ATAD5Q96QE3 1844 aa13.21□□□□□ -0.29
SCAF11-201ENST00000266589 ESYT2A0FGR8 921 aa13.21□□□□□ -0.29
SCAF11-201ENST00000266589 NDUFB10O96000 172 aa13.21□□□□□ -0.29
SCAF11-201ENST00000266589 PRKCSHP14314 528 aaPredicted RBP13.21□□□□□ -0.29
SCAF11-201ENST00000266589 KIF4BQ2VIQ3 1234 aa13.21□□□□□ -0.29
SCAF11-201ENST00000266589 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
SCAF11-201ENST00000266589 ARHGEF10LQ9HCE6 1279 aa13.21□□□□□ -0.29
SCAF11-201ENST00000266589 ZBTB21Q9ULJ3 1066 aa13.21□□□□□ -0.29
SCAF11-201ENST00000266589 A0A1W2PRG0 241 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 ZBTB5O15062 677 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 MCM7P33993 719 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 MTMR8Q96EF0 704 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 GMCL1Q96IK5 515 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 NUP88Q99567 741 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-201ENST00000266589 CSRNP2Q9H175 543 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 FAM13BQ9NYF5 915 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 KCNH3Q9ULD8 1083 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 SYNPO2Q9UMS6 1093 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 SBF1O95248 1867 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 ASTN2O75129 1339 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-201ENST00000266589 PPP1R11O60927 126 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-201ENST00000266589 ECE1P42892 770 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 ATP2C1P98194 919 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-201ENST00000266589 PTGDRQ13258 359 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 INF2Q27J81 1249 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 ANO6Q4KMQ2 910 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 KRT25Q7Z3Z0 450 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 ERCC4Q92889 916 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-201ENST00000266589 FERMT2Q96AC1 680 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 TIGD1Q96MW7 591 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 HACL1Q9UJ83 578 aa13.2□□□□□ -0.3
SCAF11-201ENST00000266589 LMNB1P20700 586 aa13.19□□□□□ -0.3
SCAF11-201ENST00000266589 CAP2P40123 477 aa13.19□□□□□ -0.3
SCAF11-201ENST00000266589 ADCY7P51828 1080 aa13.19□□□□□ -0.3
SCAF11-201ENST00000266589 PPP1R18Q6NYC8 613 aa13.19□□□□□ -0.3
SCAF11-201ENST00000266589 REXO1Q8N1G1 1221 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms