RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CCPG1Q9ULG6 757 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 A0A1W2PQ27 194 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 A0A1W2PQ64 194 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 A0A1W2PQD8 194 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 FMNL1O95466 1100 aaPredicted RBP17.12■□□□□ 0.33
TIMP3-201ENST00000266085 SLC16A2P36021 539 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 SLC39A14Q15043 492 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 GPIHBP1Q8IV16 184 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 ANKRD35Q8N283 1001 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 NAPGQ99747 312 aaPredicted RBP17.12■□□□□ 0.33
TIMP3-201ENST00000266085 CALCOCO1Q9P1Z2 691 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 PI4KBQ9UBF8 816 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 LRRIQ1Q96JM4 1722 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 CA8P35219 290 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 MAGEA1P43355 309 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 USP17L2Q6R6M4 530 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 SMIM5Q71RC9 77 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 DDX25Q9UHL0 483 aaKnown RBP17.12■□□□□ 0.33
TIMP3-201ENST00000266085 DLC1Q96QB1 1528 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 LAMC1P11047 1609 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 ASIC2Q16515 512 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 GPT2Q8TD30 523 aa17.12■□□□□ 0.33
TIMP3-201ENST00000266085 FOXP1Q9H334 677 aaPredicted RBP17.12■□□□□ 0.33
TIMP3-201ENST00000266085 EVCP57679 992 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 KIDINS220Q9ULH0 1771 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 NRKQ7Z2Y5 1582 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 A0A1W2PRG0 241 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 FOSP01100 380 aaPredicted RBP17.11■□□□□ 0.33
TIMP3-201ENST00000266085 NR5A1Q13285 461 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 GADL1Q6ZQY3 521 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 PLA2G4DQ86XP0 818 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 TICAM2Q86XR7 235 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 DHX37Q8IY37 1157 aaKnown RBP17.11■□□□□ 0.33
TIMP3-201ENST00000266085 ERO1AQ96HE7 468 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 CPS1P31327 1500 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 SPOPO43791 374 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 RDH13Q8NBN7 331 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 CD209Q9NNX6 404 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
TIMP3-201ENST00000266085 IFT81Q8WYA0 676 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 PCDHB13Q9Y5F0 798 aa17.11■□□□□ 0.33
TIMP3-201ENST00000266085 MAP3K9P80192 1104 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 CYP4A11Q02928 519 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 TRPC3Q13507 836 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 NFIXQ14938 502 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 JAKMIP2Q96AA8 810 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 KCNG1Q9UIX4 513 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 TRAPPC10P48553 1259 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 FOXO4P98177 505 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 PPP2R3AQ06190 1150 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 MCF2L2Q86YR7 1114 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 SYMPKQ92797 1274 aaKnown RBP17.1■□□□□ 0.33
TIMP3-201ENST00000266085 CALCOCO2Q13137 446 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 RTKN2Q8IZC4 609 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 MYOCDQ8IZQ8 938 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 AIFM3Q96NN9 605 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 MTRF1LQ9UGC7 380 aaKnown RBP17.1■□□□□ 0.33
TIMP3-201ENST00000266085 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.1■□□□□ 0.33
TIMP3-201ENST00000266085 COMMD10Q9Y6G5 202 aa17.1■□□□□ 0.33
TIMP3-201ENST00000266085 KIF23Q02241 960 aaPredicted RBP17.09■□□□□ 0.33
TIMP3-201ENST00000266085 KLHL30Q0D2K2 578 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 SLFN12Q8IYM2 578 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 TTC16Q8NEE8 873 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 PIGSQ96S52 555 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 FAM207AQ9NSI2 230 aaPredicted RBP17.09■□□□□ 0.33
TIMP3-201ENST00000266085 POLR3EQ9NVU0 708 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 LONP1P36776 959 aaKnown RBP17.09■□□□□ 0.33
TIMP3-201ENST00000266085 CDK8P49336 464 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 DNM2P50570 870 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 CACNB3P54284 484 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 TUBB2AQ13885 445 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 CIAPIN1Q6FI81 312 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 TUBB2BQ9BVA1 445 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 FTOQ9C0B1 505 aaKnown RBP eCLIP17.09■□□□□ 0.332e-19■□□□□ 8.4
TIMP3-201ENST00000266085 IQCGQ9H095 443 aaKnown RBP17.09■□□□□ 0.33
TIMP3-201ENST00000266085 MLXIPQ9HAP2 919 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 GTPBP6O43824 516 aaPredicted RBP17.09■□□□□ 0.33
TIMP3-201ENST00000266085 SEL1L2Q5TEA6 688 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 IWS1Q96ST2 819 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 PLCD4Q9BRC7 762 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.09■□□□□ 0.33
TIMP3-201ENST00000266085 PNMA2Q9UL42 364 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 PCDHA5Q9Y5H7 936 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 BMP3P12645 472 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 C17orf53Q8N3J3 647 aaPredicted RBP17.09■□□□□ 0.33
TIMP3-201ENST00000266085 MARCH10Q8NA82 808 aaPredicted RBP17.09■□□□□ 0.33
TIMP3-201ENST00000266085 NOX5Q96PH1 765 aa17.09■□□□□ 0.33
TIMP3-201ENST00000266085 NAP1L3Q99457 506 aaPredicted RBP17.09■□□□□ 0.33
TIMP3-201ENST00000266085 SLC27A3Q5K4L6 730 aa17.08■□□□□ 0.33
TIMP3-201ENST00000266085 MIGA2Q7L4E1 593 aa17.08■□□□□ 0.33
TIMP3-201ENST00000266085 OTUD6AQ7L8S5 288 aa17.08■□□□□ 0.33
TIMP3-201ENST00000266085 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.08■□□□□ 0.33
TIMP3-201ENST00000266085 LRRC45Q96CN5 670 aa17.08■□□□□ 0.33
TIMP3-201ENST00000266085 BRIP1Q9BX63 1249 aa17.08■□□□□ 0.33
TIMP3-201ENST00000266085 NUCKS1Q9H1E3 243 aaKnown RBP17.08■□□□□ 0.33
TIMP3-201ENST00000266085 PIK3C2BO00750 1634 aa17.08■□□□□ 0.32
TIMP3-201ENST00000266085 PPP1R14CQ8TAE6 165 aa17.08■□□□□ 0.32
TIMP3-201ENST00000266085 SECISBP2LQ93073 1101 aaKnown RBP17.08■□□□□ 0.32
TIMP3-201ENST00000266085 IQCDQ96DY2 449 aa17.08■□□□□ 0.32
TIMP3-201ENST00000266085 TSNARE1Q96NA8 513 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms