RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 BAZ2AQ9UIF9 1905 aaKnown RBP18.92■□□□□ 0.62
SQLE-201ENST00000265896 PLEKP08567 350 aaPredicted RBP18.91■□□□□ 0.62
SQLE-201ENST00000265896 ATP2C1P98194 919 aaPredicted RBP18.91■□□□□ 0.62
SQLE-201ENST00000265896 CASP8Q14790 479 aa18.91■□□□□ 0.62
SQLE-201ENST00000265896 CCDC178Q5BJE1 867 aa18.91■□□□□ 0.62
SQLE-201ENST00000265896 ANKRD13CQ8N6S4 541 aa18.91■□□□□ 0.62
SQLE-201ENST00000265896 FAM84BQ96KN1 310 aaPredicted RBP18.91■□□□□ 0.62
SQLE-201ENST00000265896 MYO6Q9UM54 1294 aa18.91■□□□□ 0.62
SQLE-201ENST00000265896 CCDC87Q9NVE4 849 aa18.91■□□□□ 0.62
SQLE-201ENST00000265896 COL1A1P02452 1464 aaPredicted RBP18.91■□□□□ 0.62
SQLE-201ENST00000265896 RTL9Q8NET4 1388 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 CXCR5P32302 372 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 TFAP4Q01664 338 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 ANKRD18AQ8IVF6 992 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 TNFRSF25Q93038 417 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 FERMT2Q96AC1 680 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 CTAGE1Q96RT6 745 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 UBXN6Q9BZV1 441 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 EHD2Q9NZN4 543 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 NDUFA10O95299 355 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 KIAA1328Q86T90 577 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 EP400Q96L91 3159 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 TAF1P21675 1872 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 CAMTA2O94983 1202 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 NTSR2O95665 410 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 FCER1AP12319 257 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 DIXDC1Q155Q3 683 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 CAVIN4Q5BKX8 364 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 TAF3Q5VWG9 929 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 TTC19Q6DKK2 380 aaPredicted RBP18.9■□□□□ 0.62
SQLE-201ENST00000265896 CYP26C1Q6V0L0 522 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 CEP112Q8N8E3 955 aa18.9■□□□□ 0.62
SQLE-201ENST00000265896 MYO1BO43795 1136 aa18.89■□□□□ 0.61
SQLE-201ENST00000265896 TRIM21P19474 475 aaKnown RBP18.89■□□□□ 0.61
SQLE-201ENST00000265896 GPS2Q13227 327 aa18.89■□□□□ 0.61
SQLE-201ENST00000265896 ENOX2Q16206 610 aaKnown RBP18.89■□□□□ 0.61
SQLE-201ENST00000265896 CAGE1Q8TC20 777 aa18.89■□□□□ 0.61
SQLE-201ENST00000265896 DCP1AQ9NPI6 582 aaPredicted RBP18.89■□□□□ 0.61
SQLE-201ENST00000265896 HDXQ7Z353 690 aa18.89■□□□□ 0.61
SQLE-201ENST00000265896 TMTC1Q8IUR5 882 aa18.89■□□□□ 0.61
SQLE-201ENST00000265896 JADE2Q9NQC1 790 aa18.89■□□□□ 0.61
SQLE-201ENST00000265896 L1RE1Q9UN81 338 aa18.89■□□□□ 0.61
SQLE-201ENST00000265896 LOC102724428A0A0B4J2F2 783 aa18.88■□□□□ 0.61
SQLE-201ENST00000265896 SIK1P57059 783 aa18.88■□□□□ 0.61
SQLE-201ENST00000265896 DNAJC21Q5F1R6 531 aaKnown RBP18.88■□□□□ 0.61
SQLE-201ENST00000265896 GJA10Q969M2 543 aa18.88■□□□□ 0.61
SQLE-201ENST00000265896 MINPP1Q9UNW1 487 aa18.88■□□□□ 0.61
SQLE-201ENST00000265896 LUC7L2Q9Y383 392 aaKnown RBP18.88■□□□□ 0.61
SQLE-201ENST00000265896 TOGARAM1Q9Y4F4 1720 aa18.88■□□□□ 0.61
SQLE-201ENST00000265896 ERVV-1B6SEH8 477 aa18.88■□□□□ 0.61
SQLE-201ENST00000265896 MYBL2P10244 700 aa18.88■□□□□ 0.61
SQLE-201ENST00000265896 UBA7P41226 1012 aa18.88■□□□□ 0.61
SQLE-201ENST00000265896 EZH2Q15910 746 aaKnown RBP18.88■□□□□ 0.61
SQLE-201ENST00000265896 LETM2Q2VYF4 491 aa18.88■□□□□ 0.61
SQLE-201ENST00000265896 NAALADL2Q58DX5 795 aa18.88■□□□□ 0.61
SQLE-201ENST00000265896 ANKRD20A12PQ8NF67 263 aa18.88■□□□□ 0.61
SQLE-201ENST00000265896 CCDC194A0A1B0GVG4 234 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 HERVK_113P62684 666 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 C2orf54Q08AI8 447 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 PTF1AQ7RTS3 328 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 TXLNBQ8N3L3 684 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 KANSL2Q9H9L4 492 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 TTF2Q9UNY4 1162 aaKnown RBP18.87■□□□□ 0.61
SQLE-201ENST00000265896 STRCP1A6NGW2 1772 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 BCL9O00512 1426 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 MAP2K7O14733 419 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 BRD3Q15059 726 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 GRIK5Q16478 980 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 FAM182BQ5T319 152 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 WDR59Q6PJI9 974 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 PLCD3Q8N3E9 789 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 RSPH14Q9UHP6 348 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 RWDD2AQ9UIY3 292 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 GTPBP6O43824 516 aaPredicted RBP18.87■□□□□ 0.61
SQLE-201ENST00000265896 ZNF658Q5TYW1 1059 aaPredicted RBP18.87■□□□□ 0.61
SQLE-201ENST00000265896 BLIDQ8IZY5 108 aa18.87■□□□□ 0.61
SQLE-201ENST00000265896 UBR2Q8IWV8 1755 aa18.86■□□□□ 0.61
SQLE-201ENST00000265896 SLC7A5Q01650 507 aa18.86■□□□□ 0.61
SQLE-201ENST00000265896 PTPROQ16827 1216 aa18.86■□□□□ 0.61
SQLE-201ENST00000265896 SLC35G1Q2M3R5 365 aa18.86■□□□□ 0.61
SQLE-201ENST00000265896 NSUN4Q96CB9 384 aaKnown RBP18.86■□□□□ 0.61
SQLE-201ENST00000265896 AK7Q96M32 723 aa18.86■□□□□ 0.61
SQLE-201ENST00000265896 KAT14Q9H8E8 782 aa18.86■□□□□ 0.61
SQLE-201ENST00000265896 FAM204AQ9H8W3 233 aa18.86■□□□□ 0.61
SQLE-201ENST00000265896 FAM207AQ9NSI2 230 aaPredicted RBP18.86■□□□□ 0.61
SQLE-201ENST00000265896 LIMA1Q9UHB6 759 aaKnown RBP18.86■□□□□ 0.61
SQLE-201ENST00000265896 PDE2AO00408 941 aaPredicted RBP18.86■□□□□ 0.61
SQLE-201ENST00000265896 HSP90B2PQ58FF3 399 aa18.86■□□□□ 0.61
SQLE-201ENST00000265896 CSGALNACT2Q8N6G5 542 aa18.86■□□□□ 0.61
SQLE-201ENST00000265896 CCDC155Q8N6L0 562 aa18.86■□□□□ 0.61
SQLE-201ENST00000265896 MB21D1Q8N884 522 aa18.86■□□□□ 0.61
SQLE-201ENST00000265896 NAA15Q9BXJ9 866 aaKnown RBP18.86■□□□□ 0.61
SQLE-201ENST00000265896 SRP68Q9UHB9 627 aaKnown RBP18.86■□□□□ 0.61
SQLE-201ENST00000265896 NUTM2BA6NNL0 878 aaPredicted RBP18.85■□□□□ 0.61
SQLE-201ENST00000265896 NUTM2EB1AL46 878 aaPredicted RBP18.85■□□□□ 0.61
SQLE-201ENST00000265896 STK4Q13043 487 aa18.85■□□□□ 0.61
SQLE-201ENST00000265896 RCSD1Q6JBY9 416 aa18.85■□□□□ 0.61
SQLE-201ENST00000265896 DTHD1Q6ZMT9 781 aa18.85■□□□□ 0.61
SQLE-201ENST00000265896 DYMQ7RTS9 669 aa18.85■□□□□ 0.61
SQLE-201ENST00000265896 PNMA1Q8ND90 353 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms