RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 REPS2Q8NFH8 660 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 SLF1Q9BQI6 1058 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 SPZ1Q9BXG8 430 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 RBM28Q9NW13 759 aaKnown RBP16.64■□□□□ 0.25
SSBP1-201ENST00000265304 WBP1LQ9NX94 342 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.64■□□□□ 0.25
SSBP1-201ENST00000265304 MORF4L1Q9UBU8 362 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 LIMCH1Q9UPQ0 1083 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 CCDC196A0A1B0GTZ2 297 aa16.63■□□□□ 0.25
SSBP1-201ENST00000265304 SPDYE16A6NNV3 312 aaPredicted RBP16.63■□□□□ 0.25
SSBP1-201ENST00000265304 TMEM232C9JQI7 657 aa16.63■□□□□ 0.25
SSBP1-201ENST00000265304 KLRF2D3W0D1 207 aa16.63■□□□□ 0.25
SSBP1-201ENST00000265304 ST18O60284 1047 aa16.63■□□□□ 0.25
SSBP1-201ENST00000265304 TLR2O60603 784 aa16.63■□□□□ 0.25
SSBP1-201ENST00000265304 HERVK_113P62684 666 aa16.63■□□□□ 0.25
SSBP1-201ENST00000265304 TTBK2Q6IQ55 1244 aa16.63■□□□□ 0.25
SSBP1-201ENST00000265304 C17orf99Q6UX52 265 aa16.63■□□□□ 0.25
SSBP1-201ENST00000265304 KCTD1Q719H9 257 aa16.63■□□□□ 0.25
SSBP1-201ENST00000265304 CTCFLQ8NI51 663 aaPredicted RBP16.63■□□□□ 0.25
SSBP1-201ENST00000265304 SNX21Q969T3 373 aa16.63■□□□□ 0.25
SSBP1-201ENST00000265304 ZSCAN31Q96LW9 406 aaPredicted RBP16.63■□□□□ 0.25
SSBP1-201ENST00000265304 PARK7Q99497 189 aaKnown RBP16.63■□□□□ 0.25
SSBP1-201ENST00000265304 SLC38A10Q9HBR0 1119 aa16.63■□□□□ 0.25
SSBP1-201ENST00000265304 FBXO28Q9NVF7 368 aa16.63■□□□□ 0.25
SSBP1-201ENST00000265304 RBPJLQ9UBG7 517 aa16.63■□□□□ 0.25
SSBP1-201ENST00000265304 ZNFX1Q9P2E3 1918 aaKnown RBP16.62■□□□□ 0.25
SSBP1-201ENST00000265304 VWA5AO00534 786 aa16.62■□□□□ 0.25
SSBP1-201ENST00000265304 CYTH3O43739 400 aa16.62■□□□□ 0.25
SSBP1-201ENST00000265304 FLOT1O75955 427 aa16.62■□□□□ 0.25
SSBP1-201ENST00000265304 BCRP11274 1271 aa16.62■□□□□ 0.25
SSBP1-201ENST00000265304 CDC27P30260 824 aa16.62■□□□□ 0.25
SSBP1-201ENST00000265304 OAZ1P54368 228 aa16.62■□□□□ 0.25
SSBP1-201ENST00000265304 ME3Q16798 604 aa16.62■□□□□ 0.25
SSBP1-201ENST00000265304 TMTC3Q6ZXV5 915 aa16.62■□□□□ 0.25
SSBP1-201ENST00000265304 MYL10Q9BUA6 226 aa16.62■□□□□ 0.25
SSBP1-201ENST00000265304 RNF186Q9NXI6 227 aa16.62■□□□□ 0.25
SSBP1-201ENST00000265304 PRR12Q9ULL5 1215 aa16.62■□□□□ 0.25
SSBP1-201ENST00000265304 RABGAP1Q9Y3P9 1069 aa16.62■□□□□ 0.25
SSBP1-201ENST00000265304 MGAMO43451 1857 aa16.61■□□□□ 0.25
SSBP1-201ENST00000265304 CD2BP2O95400 341 aaKnown RBP16.61■□□□□ 0.25
SSBP1-201ENST00000265304 IRX3P78415 501 aaPredicted RBP16.61■□□□□ 0.25
SSBP1-201ENST00000265304 GRM1Q13255 1194 aa16.61■□□□□ 0.25
SSBP1-201ENST00000265304 RTN1Q16799 776 aa16.61■□□□□ 0.25
SSBP1-201ENST00000265304 SYDE2Q5VT97 1194 aa16.61■□□□□ 0.25
SSBP1-201ENST00000265304 NBPF11Q86T75 865 aa16.61■□□□□ 0.25
SSBP1-201ENST00000265304 MICU3Q86XE3 530 aa16.61■□□□□ 0.25
SSBP1-201ENST00000265304 SRBD1Q8N5C6 995 aaKnown RBP16.61■□□□□ 0.25
SSBP1-201ENST00000265304 TANGO6Q9C0B7 1094 aa16.61■□□□□ 0.25
SSBP1-201ENST00000265304 RANBP17Q9H2T7 1088 aaKnown RBP16.61■□□□□ 0.25
SSBP1-201ENST00000265304 JMJD4Q9H9V9 463 aa16.61■□□□□ 0.25
SSBP1-201ENST00000265304 ZFYVE28Q9HCC9 887 aa16.61■□□□□ 0.25
SSBP1-201ENST00000265304 SH2B1Q9NRF2 756 aaPredicted RBP16.61■□□□□ 0.25
SSBP1-201ENST00000265304 GOLGA8BA8MQT2 603 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 CNMDO75829 334 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 GOLGA8HP0CJ92 632 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 CYP2C8P10632 490 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 IFNAR1P17181 557 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 ADD1P35611 737 aaKnown RBP16.6■□□□□ 0.25
SSBP1-201ENST00000265304 METAP2P50579 478 aaKnown RBP eCLIP16.6■□□□□ 0.25
SSBP1-201ENST00000265304 CRHR2Q13324 411 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 TAF1CQ15572 869 aaPredicted RBP16.6■□□□□ 0.25
SSBP1-201ENST00000265304 CCDC96Q2M329 555 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.6■□□□□ 0.25
SSBP1-201ENST00000265304 ADGRF4Q8IZF3 695 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 NUP133Q8WUM0 1156 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 CHMP4CQ96CF2 233 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 ATG4CQ96DT6 458 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 MAF1Q9H063 256 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 GPCPD1Q9NPB8 672 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 PNMA2Q9UL42 364 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 ZNF214Q9UL59 606 aaPredicted RBP16.6■□□□□ 0.25
SSBP1-201ENST00000265304 ZNF536O15090 1300 aa16.6■□□□□ 0.25
SSBP1-201ENST00000265304 GOLGA8AA7E2F4 631 aa16.59■□□□□ 0.25
SSBP1-201ENST00000265304 RXRAP19793 462 aa16.59■□□□□ 0.25
SSBP1-201ENST00000265304 SCRN1Q12765 414 aa16.59■□□□□ 0.25
SSBP1-201ENST00000265304 FAM110CQ1W6H9 321 aa16.59■□□□□ 0.25
SSBP1-201ENST00000265304 GTF3C6Q969F1 213 aa16.59■□□□□ 0.25
SSBP1-201ENST00000265304 FRMPD2Q68DX3 1309 aaPredicted RBP16.59■□□□□ 0.25
SSBP1-201ENST00000265304 DHX16O60231 1041 aaKnown RBP16.58■□□□□ 0.24
SSBP1-201ENST00000265304 PLEKHA8P1O95397 391 aa16.58■□□□□ 0.24
SSBP1-201ENST00000265304 LARGE1O95461 756 aa16.58■□□□□ 0.24
SSBP1-201ENST00000265304 SLC16A2P36021 539 aa16.58■□□□□ 0.24
SSBP1-201ENST00000265304 ST3GAL1Q11201 340 aa16.58■□□□□ 0.24
SSBP1-201ENST00000265304 UBA5Q9GZZ9 404 aa16.58■□□□□ 0.24
SSBP1-201ENST00000265304 SLKQ9H2G2 1235 aaPredicted RBP16.58■□□□□ 0.24
SSBP1-201ENST00000265304 R3HDMLQ9H3Y0 253 aa16.58■□□□□ 0.24
SSBP1-201ENST00000265304 TXNRD2Q9NNW7 524 aa16.58■□□□□ 0.24
SSBP1-201ENST00000265304 BTBD7Q9P203 1132 aa16.58■□□□□ 0.24
SSBP1-201ENST00000265304 CNTNAP5Q8WYK1 1306 aa16.57■□□□□ 0.24
SSBP1-201ENST00000265304 PRPF3O43395 683 aaKnown RBP16.57■□□□□ 0.24
SSBP1-201ENST00000265304 RAD21O60216 631 aa16.57■□□□□ 0.24
SSBP1-201ENST00000265304 TMEM132BQ14DG7 1078 aa16.57■□□□□ 0.24
SSBP1-201ENST00000265304 RIOX2Q8IUF8 465 aa16.57■□□□□ 0.24
SSBP1-201ENST00000265304 TEX2Q8IWB9 1127 aa16.57■□□□□ 0.24
SSBP1-201ENST00000265304 SHCBP1Q8NEM2 672 aa16.57■□□□□ 0.24
SSBP1-201ENST00000265304 KIFC2Q96AC6 838 aa16.57■□□□□ 0.24
SSBP1-201ENST00000265304 TMX3Q96JJ7 454 aa16.57■□□□□ 0.24
SSBP1-201ENST00000265304 LARP6Q9BRS8 491 aaKnown RBP16.57■□□□□ 0.24
SSBP1-201ENST00000265304 LLPHQ9BRT6 129 aaKnown RBP16.57■□□□□ 0.24
SSBP1-201ENST00000265304 RNF26Q9BY78 433 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms