RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 PRO3102Q9H379 93 aa23.94■■□□□ 1.42
CKLF-201ENST00000264001 DDX20Q9UHI6 824 aaKnown RBP23.94■■□□□ 1.42
CKLF-201ENST00000264001 SDSP20132 328 aa23.93■■□□□ 1.42
CKLF-201ENST00000264001 PPP4R3BQ5MIZ7 849 aa23.93■■□□□ 1.42
CKLF-201ENST00000264001 KIFC2Q96AC6 838 aa23.93■■□□□ 1.42
CKLF-201ENST00000264001 MAML3Q96JK9 1138 aa23.93■■□□□ 1.42
CKLF-201ENST00000264001 TEX13BQ9BXU2 312 aa23.93■■□□□ 1.42
CKLF-201ENST00000264001 IL17RBQ9NRM6 502 aa23.93■■□□□ 1.42
CKLF-201ENST00000264001 FEM1BQ9UK73 627 aa23.93■■□□□ 1.42
CKLF-201ENST00000264001 ZMYM6O95789 1325 aa23.92■■□□□ 1.42
CKLF-201ENST00000264001 ORC4O43929 436 aa23.92■■□□□ 1.42
CKLF-201ENST00000264001 RANBP6O60518 1105 aaKnown RBP23.92■■□□□ 1.42
CKLF-201ENST00000264001 MSCO60682 206 aa23.92■■□□□ 1.42
CKLF-201ENST00000264001 ZBED4O75132 1171 aa23.92■■□□□ 1.42
CKLF-201ENST00000264001 FGRP09769 529 aa23.92■■□□□ 1.42
CKLF-201ENST00000264001 BMP3P12645 472 aa23.92■■□□□ 1.42
CKLF-201ENST00000264001 KCTD2Q14681 263 aa23.92■■□□□ 1.42
CKLF-201ENST00000264001 SNRNP48Q6IEG0 339 aaKnown RBP23.92■■□□□ 1.42
CKLF-201ENST00000264001 STX8Q9UNK0 236 aa23.92■■□□□ 1.42
CKLF-201ENST00000264001 CTDP1Q9Y5B0 961 aaPredicted RBP23.92■■□□□ 1.42
CKLF-201ENST00000264001 SMCHD1A6NHR9 2005 aa23.92■■□□□ 1.42
CKLF-201ENST00000264001 PFASO15067 1338 aa23.91■■□□□ 1.42
CKLF-201ENST00000264001 A0A1W2PPC1 479 aa23.91■■□□□ 1.42
CKLF-201ENST00000264001 NMT2O60551 498 aa23.91■■□□□ 1.42
CKLF-201ENST00000264001 PGK2P07205 417 aa23.91■■□□□ 1.42
CKLF-201ENST00000264001 CPXCR1Q8N123 301 aa23.91■■□□□ 1.42
CKLF-201ENST00000264001 ISY1Q9ULR0 285 aaKnown RBP23.91■■□□□ 1.42
CKLF-201ENST00000264001 RIPK3Q9Y572 518 aa23.91■■□□□ 1.42
CKLF-201ENST00000264001 ATP2A1O14983 1001 aa23.9■■□□□ 1.42
CKLF-201ENST00000264001 COL6A1P12109 1028 aa23.9■■□□□ 1.42
CKLF-201ENST00000264001 IRX6P78412 446 aaPredicted RBP23.9■■□□□ 1.42
CKLF-201ENST00000264001 CHMP4CQ96CF2 233 aa23.9■■□□□ 1.42
CKLF-201ENST00000264001 SLC38A10Q9HBR0 1119 aa23.9■■□□□ 1.42
CKLF-201ENST00000264001 RAVER2Q9HCJ3 691 aaKnown RBP23.9■■□□□ 1.42
CKLF-201ENST00000264001 TOMM22Q9NS69 142 aa23.9■■□□□ 1.42
CKLF-201ENST00000264001 TMEM232C9JQI7 657 aa23.89■■□□□ 1.41
CKLF-201ENST00000264001 SLC4A3P48751 1232 aa23.89■■□□□ 1.41
CKLF-201ENST00000264001 MFAP1P55081 439 aaKnown RBP23.89■■□□□ 1.41
CKLF-201ENST00000264001 HAND2P61296 217 aa23.89■■□□□ 1.41
CKLF-201ENST00000264001 ZNF792Q3KQV3 632 aa23.89■■□□□ 1.41
CKLF-201ENST00000264001 RRP12Q5JTH9 1297 aaKnown RBP23.89■■□□□ 1.41
CKLF-201ENST00000264001 PRAMEF19Q5SWL8 479 aa23.89■■□□□ 1.41
CKLF-201ENST00000264001 C7orf61Q8IZ16 206 aa23.89■■□□□ 1.41
CKLF-201ENST00000264001 GMCL1Q96IK5 515 aa23.89■■□□□ 1.41
CKLF-201ENST00000264001 DIS3Q9Y2L1 958 aaKnown RBP23.89■■□□□ 1.41
CKLF-201ENST00000264001 MCCP23508 829 aa23.88■■□□□ 1.41
CKLF-201ENST00000264001 SLC1A4P43007 532 aa23.88■■□□□ 1.41
CKLF-201ENST00000264001 STAT2P52630 851 aa23.88■■□□□ 1.41
CKLF-201ENST00000264001 CWC27Q6UX04 472 aaKnown RBP23.88■■□□□ 1.41
CKLF-201ENST00000264001 DIAPH3Q9NSV4 1193 aa23.88■■□□□ 1.41
CKLF-201ENST00000264001 SEPT4O43236 478 aa23.87■■□□□ 1.41
CKLF-201ENST00000264001 NOVP48745 357 aa23.87■■□□□ 1.41
CKLF-201ENST00000264001 ANO1Q5XXA6 986 aa23.87■■□□□ 1.41
CKLF-201ENST00000264001 FAM160B2Q86V87 743 aa23.87■■□□□ 1.41
CKLF-201ENST00000264001 CHURC1Q8WUH1 139 aa23.87■■□□□ 1.41
CKLF-201ENST00000264001 STAG1Q8WVM7 1258 aa23.87■■□□□ 1.41
CKLF-201ENST00000264001 SZT2Q5T011 3432 aa23.87■■□□□ 1.41
CKLF-201ENST00000264001 HIP1O00291 1037 aa23.86■■□□□ 1.41
CKLF-201ENST00000264001 FDX1P10109 184 aa23.86■■□□□ 1.41
CKLF-201ENST00000264001 OAZ1P54368 228 aa23.86■■□□□ 1.41
CKLF-201ENST00000264001 IKQ13123 557 aaPredicted RBP23.86■■□□□ 1.41
CKLF-201ENST00000264001 KCTD1Q719H9 257 aa23.86■■□□□ 1.41
CKLF-201ENST00000264001 TINF2Q9BSI4 451 aa23.86■■□□□ 1.41
CKLF-201ENST00000264001 LAMA4Q16363 1823 aa23.85■■□□□ 1.41
CKLF-201ENST00000264001 PDE4AP27815 886 aa23.85■■□□□ 1.41
CKLF-201ENST00000264001 AKNAD1Q5T1N1 836 aa23.85■■□□□ 1.41
CKLF-201ENST00000264001 RCSD1Q6JBY9 416 aa23.85■■□□□ 1.41
CKLF-201ENST00000264001 RASGRP2Q7LDG7 609 aa23.85■■□□□ 1.41
CKLF-201ENST00000264001 DDX11Q96FC9 970 aa23.85■■□□□ 1.41
CKLF-201ENST00000264001 MTMR7Q9Y216 660 aa23.85■■□□□ 1.41
CKLF-201ENST00000264001 DNM1LO00429 736 aa23.84■■□□□ 1.41
CKLF-201ENST00000264001 PLA2G6O60733 806 aa23.84■■□□□ 1.41
CKLF-201ENST00000264001 MFSD6Q6ZSS7 791 aa23.84■■□□□ 1.41
CKLF-201ENST00000264001 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.84■■□□□ 1.41
CKLF-201ENST00000264001 TBC1D10CQ8IV04 446 aa23.84■■□□□ 1.41
CKLF-201ENST00000264001 CHST13Q8NET6 341 aa23.84■■□□□ 1.41
CKLF-201ENST00000264001 SENP6Q9GZR1 1112 aaPredicted RBP23.84■■□□□ 1.41
CKLF-201ENST00000264001 TCP11L1Q9NUJ3 509 aa23.84■■□□□ 1.41
CKLF-201ENST00000264001 NRBP1Q9UHY1 535 aa23.84■■□□□ 1.41
CKLF-201ENST00000264001 ZMYND8Q9ULU4 1186 aaPredicted RBP23.84■■□□□ 1.41
CKLF-201ENST00000264001 MCM3APO60318 1980 aa23.83■■□□□ 1.41
CKLF-201ENST00000264001 DNAJC25-GNG10A0A024R161 153 aa23.83■■□□□ 1.41
CKLF-201ENST00000264001 PCP11498 1178 aaKnown RBP23.83■■□□□ 1.41
CKLF-201ENST00000264001 LRRC26Q2I0M4 334 aa23.83■■□□□ 1.41
CKLF-201ENST00000264001 ARRDC4Q8NCT1 418 aa23.83■■□□□ 1.41
CKLF-201ENST00000264001 FBXO40Q9UH90 709 aa23.83■■□□□ 1.41
CKLF-201ENST00000264001 TOP1P11387 765 aaKnown RBP23.82■■□□□ 1.4
CKLF-201ENST00000264001 CCDC96Q2M329 555 aa23.82■■□□□ 1.4
CKLF-201ENST00000264001 GJC2Q5T442 439 aaPredicted RBP23.82■■□□□ 1.4
CKLF-201ENST00000264001 ANKRD35Q8N283 1001 aa23.82■■□□□ 1.4
CKLF-201ENST00000264001 DCAF4Q8WV16 495 aa23.82■■□□□ 1.4
CKLF-201ENST00000264001 TMEM47Q9BQJ4 181 aa23.82■■□□□ 1.4
CKLF-201ENST00000264001 RNF41Q9H4P4 317 aaPredicted RBP23.82■■□□□ 1.4
CKLF-201ENST00000264001 HOMER2Q9NSB8 354 aa23.82■■□□□ 1.4
CKLF-201ENST00000264001 ZNF536O15090 1300 aa23.82■■□□□ 1.4
CKLF-201ENST00000264001 ZNF213O14771 459 aa23.81■■□□□ 1.4
CKLF-201ENST00000264001 TAL1P17542 331 aaPredicted RBP23.81■■□□□ 1.4
CKLF-201ENST00000264001 MSL3Q8N5Y2 521 aaKnown RBP23.81■■□□□ 1.4
CKLF-201ENST00000264001 AGBL1Q96MI9 1066 aa23.81■■□□□ 1.4
CKLF-201ENST00000264001 PRR12Q9ULL5 1215 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms