RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ZMYND10O75800 440 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 A1BGP04217 495 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 ATP6V1AP38606 617 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 ZC3H6P61129 1189 aaKnown RBP13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 SPA17Q15506 151 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 PDXDC2PQ6P474 469 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 GPATCH11Q8N954 259 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 ZBTB38Q8NAP3 1195 aaPredicted RBP13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 GDAP1L1Q96MZ0 367 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 EPB41L4AQ9HCS5 686 aaPredicted RBP13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 A1CFQ9NQ94 594 aaKnown RBP13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 PES1O00541 588 aaKnown RBP13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 ZEB2O60315 1214 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 MBD4O95243 580 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 TNFRSF8P28908 595 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 TDO2P48775 406 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 ZBED6P86452 979 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 WDR59Q6PJI9 974 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 PRPF38AQ8NAV1 312 aaKnown RBP13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 ZNF507Q8TCN5 953 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 CABS1Q96KC9 395 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 BLZF1Q9H2G9 400 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 INCENPQ9NQS7 918 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 RBM28Q9NW13 759 aaKnown RBP13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 SNX12Q9UMY4 172 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 DISP2A7MBM2 1401 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 NUP188Q5SRE5 1749 aa13.85□□□□□ -0.19
CHMP2B-201ENST00000263780 ANKRD18BA2A2Z9 1011 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 H0YHG0 523 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 NDUFAB1O14561 156 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 MYL1P05976 194 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 MYBL2P10244 700 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 TCP1P17987 556 aaKnown RBP13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 VAV2P52735 878 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 ZNF174Q15697 407 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 GLE1Q53GS7 698 aaKnown RBP13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 KAT2BQ92831 832 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 CAVIN3Q969G5 261 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 NHEJ1Q9H9Q4 299 aaPredicted RBP13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 GRIN2DO15399 1336 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 RIC1Q4ADV7 1423 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 MYH8P13535 1937 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 FSBPO95073 299 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 SRGNP10124 158 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 MMP14P50281 582 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 PTGDRQ13258 359 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 YTHDF3Q7Z739 585 aaKnown RBP13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 ADSSL1Q8N142 457 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 ORAI2Q96SN7 254 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 CXorf56Q9H5V9 222 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 VPS54Q9P1Q0 977 aa13.84□□□□□ -0.19
CHMP2B-201ENST00000263780 NUTM2BA6NNL0 878 aaPredicted RBP13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 NUTM2EB1AL46 878 aaPredicted RBP13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 PSMA7O14818 248 aa13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 CALM1P0DP23 149 aa13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 CALM2P0DP24 149 aa13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 CALM3P0DP25 149 aa13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 TRIM21P19474 475 aaKnown RBP13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 PRCPP42785 496 aa13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 DDR1Q08345 913 aa13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 C2orf54Q08AI8 447 aa13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 KCNB1Q14721 858 aa13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 FAM114A1Q8IWE2 563 aa13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 CCDC155Q8N6L0 562 aa13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 PAGR1Q9BTK6 254 aa13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 EXOC1Q9NV70 894 aa13.83□□□□□ -0.19
CHMP2B-201ENST00000263780 GSG1L2A8MUP6 293 aa13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 PDE2AO00408 941 aaPredicted RBP13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 MEFVO15553 781 aaPredicted RBP13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 PDE8BO95263 885 aa13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 LONP1P36776 959 aaKnown RBP13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 PAFAH1B1P43034 410 aa13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 ARL6IP4Q66PJ3 421 aaKnown RBP13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 GSPT2Q8IYD1 628 aaKnown RBP13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 ESR2Q92731 530 aa13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 ALS2CR12Q96Q35 445 aa13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 GGA2Q9UJY4 613 aa13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 PNPLA7Q6ZV29 1317 aa13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 TIAM2Q8IVF5 1701 aa13.83□□□□□ -0.2
CHMP2B-201ENST00000263780 ERVV-2B6SEH9 535 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 COBLO75128 1261 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 CHRM1P11229 460 aaPredicted RBP13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 FIGNQ5HY92 759 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 CCDC181Q5TID7 509 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 CATIPQ7Z7H3 387 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 IRF2BP1Q8IU81 584 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 CREG2Q8IUH2 290 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 CMTR1Q8N1G2 835 aaKnown RBP13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 MAGEB6Q8N7X4 407 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 SPATA4Q8NEY3 305 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 STAMQ92783 540 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 CCDC42Q96M95 316 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 ZKSCAN3Q9BRR0 538 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 CAPN7Q9Y6W3 813 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 A0A1W2PQJ5 194 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 SRRM3A6NNA2 597 aaPredicted RBP13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 ZNF185O15231 689 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 ITGA6P23229 1130 aa13.82□□□□□ -0.2
CHMP2B-201ENST00000263780 PPP1R2P41236 205 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms