RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 MTA3Q9BTC8 594 aa21.43■■□□□ 1.02
SDF4-201ENST00000263741 TM6SF1Q9BZW5 370 aa21.43■■□□□ 1.02
SDF4-201ENST00000263741 ARHGAP39Q9C0H5 1083 aa21.43■■□□□ 1.02
SDF4-201ENST00000263741 FEM1BQ9UK73 627 aa21.43■■□□□ 1.02
SDF4-201ENST00000263741 NAP1L2Q9ULW6 460 aaPredicted RBP21.43■■□□□ 1.02
SDF4-201ENST00000263741 LIFRP42702 1097 aa21.42■■□□□ 1.02
SDF4-201ENST00000263741 UBA5Q9GZZ9 404 aa21.42■■□□□ 1.02
SDF4-201ENST00000263741 UPF2Q9HAU5 1272 aaKnown RBP21.42■■□□□ 1.02
SDF4-201ENST00000263741 PARP1P09874 1014 aaKnown RBP21.41■■□□□ 1.02
SDF4-201ENST00000263741 TAL1P17542 331 aaPredicted RBP21.41■■□□□ 1.02
SDF4-201ENST00000263741 GCLCP48506 637 aaPredicted RBP21.41■■□□□ 1.02
SDF4-201ENST00000263741 KIF2CQ99661 725 aa21.41■■□□□ 1.02
SDF4-201ENST00000263741 KLF18A0A0U1RQI7 1052 aa21.41■■□□□ 1.02
SDF4-201ENST00000263741 CTGFP29279 349 aa21.41■■□□□ 1.02
SDF4-201ENST00000263741 Q3C1V9 767 aa21.41■■□□□ 1.02
SDF4-201ENST00000263741 SGMS1Q86VZ5 419 aa21.41■■□□□ 1.02
SDF4-201ENST00000263741 CD99L2Q8TCZ2 262 aa21.41■■□□□ 1.02
SDF4-201ENST00000263741 HOXC10Q9NYD6 342 aa21.41■■□□□ 1.02
SDF4-201ENST00000263741 MAD2L2Q9UI95 211 aa21.41■■□□□ 1.02
SDF4-201ENST00000263741 PRR12Q9ULL5 1215 aa21.41■■□□□ 1.02
SDF4-201ENST00000263741 SLC12A7Q9Y666 1083 aa21.41■■□□□ 1.02
SDF4-201ENST00000263741 VWA5AO00534 786 aa21.4■■□□□ 1.02
SDF4-201ENST00000263741 ERVK-9P63128 1117 aa21.4■■□□□ 1.02
SDF4-201ENST00000263741 ERVK-24P63145 666 aa21.4■■□□□ 1.02
SDF4-201ENST00000263741 SP3Q02447 781 aa21.4■■□□□ 1.02
SDF4-201ENST00000263741 TOB2Q14106 344 aaPredicted RBP21.4■■□□□ 1.02
SDF4-201ENST00000263741 PLS1Q14651 629 aa21.4■■□□□ 1.02
SDF4-201ENST00000263741 GRM4Q14833 912 aa21.4■■□□□ 1.02
SDF4-201ENST00000263741 FAM110CQ1W6H9 321 aa21.4■■□□□ 1.02
SDF4-201ENST00000263741 APOA5Q6Q788 366 aa21.4■■□□□ 1.02
SDF4-201ENST00000263741 LBX2Q6XYB7 198 aa21.4■■□□□ 1.02
SDF4-201ENST00000263741 PRPF38AQ8NAV1 312 aaKnown RBP21.4■■□□□ 1.02
SDF4-201ENST00000263741 PDRG1Q9NUG6 133 aa21.4■■□□□ 1.02
SDF4-201ENST00000263741 MYPNQ86TC9 1320 aa21.4■■□□□ 1.02
SDF4-201ENST00000263741 RBM25P49756 843 aaKnown RBP21.4■■□□□ 1.02
SDF4-201ENST00000263741 TMEM132BQ14DG7 1078 aa21.4■■□□□ 1.02
SDF4-201ENST00000263741 NOL8Q76FK4 1167 aaKnown RBP21.4■■□□□ 1.02
SDF4-201ENST00000263741 IL17RAQ96F46 866 aa21.4■■□□□ 1.02
SDF4-201ENST00000263741 HTTP42858 3142 aa21.39■■□□□ 1.02
SDF4-201ENST00000263741 FKTNO75072 461 aa21.39■■□□□ 1.01
SDF4-201ENST00000263741 DDAH1O94760 285 aa21.39■■□□□ 1.01
SDF4-201ENST00000263741 ASPRV1Q53RT3 343 aa21.39■■□□□ 1.01
SDF4-201ENST00000263741 SYDE2Q5VT97 1194 aa21.39■■□□□ 1.01
SDF4-201ENST00000263741 FAM160B2Q86V87 743 aa21.39■■□□□ 1.01
SDF4-201ENST00000263741 PORCNQ9H237 461 aa21.39■■□□□ 1.01
SDF4-201ENST00000263741 MORF4L1Q9UBU8 362 aa21.39■■□□□ 1.01
SDF4-201ENST00000263741 ADAMTS5Q9UNA0 930 aa21.39■■□□□ 1.01
SDF4-201ENST00000263741 ZNFX1Q9P2E3 1918 aaKnown RBP21.39■■□□□ 1.01
SDF4-201ENST00000263741 CENPFP49454 3210 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 SLC4A3P48751 1232 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 LACTBP83111 547 aaPredicted RBP21.38■■□□□ 1.01
SDF4-201ENST00000263741 SLC35G1Q2M3R5 365 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 GPATCH4Q5T3I0 446 aaKnown RBP21.38■■□□□ 1.01
SDF4-201ENST00000263741 CCDC174Q6PII3 467 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 CPXCR1Q8N123 301 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 CMTR1Q8N1G2 835 aaKnown RBP21.38■■□□□ 1.01
SDF4-201ENST00000263741 TMTC2Q8N394 836 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 REPS2Q8NFH8 660 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 CHURC1Q8WUH1 139 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 RABGAP1Q9Y3P9 1069 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 GOLGA8BA8MQT2 603 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 NBPF11Q86T75 865 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 GPRC5AQ8NFJ5 357 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 TBC1D32Q96NH3 1257 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 AGXT2Q9BYV1 514 aa21.38■■□□□ 1.01
SDF4-201ENST00000263741 RAVER2Q9HCJ3 691 aaKnown RBP21.38■■□□□ 1.01
SDF4-201ENST00000263741 PALM3A6NDB9 673 aaPredicted RBP21.37■■□□□ 1.01
SDF4-201ENST00000263741 KLRF2D3W0D1 207 aa21.37■■□□□ 1.01
SDF4-201ENST00000263741 DHX16O60231 1041 aaKnown RBP21.37■■□□□ 1.01
SDF4-201ENST00000263741 PLEKHA8P1O95397 391 aa21.37■■□□□ 1.01
SDF4-201ENST00000263741 NEK4P51957 841 aa21.37■■□□□ 1.01
SDF4-201ENST00000263741 VAT1LQ9HCJ6 419 aa21.37■■□□□ 1.01
SDF4-201ENST00000263741 ZNF214Q9UL59 606 aaPredicted RBP21.37■■□□□ 1.01
SDF4-201ENST00000263741 ZBTB43O43298 467 aa21.36■■□□□ 1.01
SDF4-201ENST00000263741 BTNL9Q6UXG8 535 aa21.36■■□□□ 1.01
SDF4-201ENST00000263741 CTCFLQ8NI51 663 aaPredicted RBP21.36■■□□□ 1.01
SDF4-201ENST00000263741 GTF3C2Q8WUA4 911 aaPredicted RBP21.36■■□□□ 1.01
SDF4-201ENST00000263741 SPATC1LQ9H0A9 340 aa21.36■■□□□ 1.01
SDF4-201ENST00000263741 EFCC1Q9HA90 598 aa21.36■■□□□ 1.01
SDF4-201ENST00000263741 SLC38A10Q9HBR0 1119 aa21.36■■□□□ 1.01
SDF4-201ENST00000263741 AK2P54819 239 aa21.36■■□□□ 1.01
SDF4-201ENST00000263741 WDR78Q5VTH9 848 aa21.36■■□□□ 1.01
SDF4-201ENST00000263741 PIBF1Q8WXW3 757 aa21.36■■□□□ 1.01
SDF4-201ENST00000263741 MOV10L1Q9BXT6 1211 aaKnown RBP21.36■■□□□ 1.01
SDF4-201ENST00000263741 RBBP6Q7Z6E9 1792 aaKnown RBP21.35■■□□□ 1.01
SDF4-201ENST00000263741 PLA2G6O60733 806 aa21.35■■□□□ 1.01
SDF4-201ENST00000263741 NOM1Q5C9Z4 860 aaKnown RBP21.35■■□□□ 1.01
SDF4-201ENST00000263741 ADGRF4Q8IZF3 695 aa21.35■■□□□ 1.01
SDF4-201ENST00000263741 MB21D1Q8N884 522 aa21.35■■□□□ 1.01
SDF4-201ENST00000263741 TRIM47Q96LD4 638 aa21.35■■□□□ 1.01
SDF4-201ENST00000263741 CTDP1Q9Y5B0 961 aaPredicted RBP21.35■■□□□ 1.01
SDF4-201ENST00000263741 GOLGA8AA7E2F4 631 aa21.35■■□□□ 1.01
SDF4-201ENST00000263741 ZBED4O75132 1171 aa21.35■■□□□ 1.01
SDF4-201ENST00000263741 SNRNP48Q6IEG0 339 aaKnown RBP21.35■■□□□ 1.01
SDF4-201ENST00000263741 SYNE3Q6ZMZ3 975 aa21.35■■□□□ 1.01
SDF4-201ENST00000263741 HPS5Q9UPZ3 1129 aa21.35■■□□□ 1.01
SDF4-201ENST00000263741 RIPK3Q9Y572 518 aa21.35■■□□□ 1.01
SDF4-201ENST00000263741 ZNF536O15090 1300 aa21.34■■□□□ 1.01
SDF4-201ENST00000263741 PLXNA1Q9UIW2 1896 aa21.34■■□□□ 1.01
SDF4-201ENST00000263741 CYTH3O43739 400 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms