RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 FERMT2Q96AC1 680 aa18.64■□□□□ 0.57
ZNF541-201ENST00000263351 LIMA1Q9UHB6 759 aaKnown RBP18.64■□□□□ 0.57
ZNF541-201ENST00000263351 ARAP2Q8WZ64 1704 aa18.64■□□□□ 0.57
ZNF541-201ENST00000263351 CACNA1SQ13698 1873 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 B4DLN1 442 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 GOLGA8HP0CJ92 632 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 MYBL2P10244 700 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 SCG2P13521 617 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 SLC44A5Q8NCS7 719 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 FAM84BQ96KN1 310 aaPredicted RBP18.63■□□□□ 0.57
ZNF541-201ENST00000263351 BCL9LQ86UU0 1499 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 CTAGE15A4D2H0 777 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 TULP2O00295 520 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 NDUFA10O95299 355 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 CTAGE8P0CG41 777 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 MECOMQ03112 1051 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 CTAGE6Q86UF2 777 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 CTAGE4Q8IX94 777 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 C10orf67Q8IYJ2 551 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 MSANTD4Q8NCY6 345 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 SMARCAL1Q9NZC9 954 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 MYO6Q9UM54 1294 aa18.63■□□□□ 0.57
ZNF541-201ENST00000263351 PLCH1Q4KWH8 1693 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 PLEKP08567 350 aaPredicted RBP18.62■□□□□ 0.57
ZNF541-201ENST00000263351 STAT6P42226 847 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 BRD3Q15059 726 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 INF2Q27J81 1249 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 CTAGE1Q96RT6 745 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 RAB21Q9UL25 225 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 EPN1Q9Y6I3 576 aaPredicted RBP18.62■□□□□ 0.57
ZNF541-201ENST00000263351 MYH14Q7Z406 1995 aaKnown RBP18.62■□□□□ 0.57
ZNF541-201ENST00000263351 USP17L3A6NCW0 530 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 USP17L4A6NCW7 530 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 RCSD1Q6JBY9 416 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 USP17L1Q7RTZ2 530 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 KRT26Q7Z3Y9 468 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 CEP112Q8N8E3 955 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 C4orf32Q8N8J7 132 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 CTCFLQ8NI51 663 aaPredicted RBP18.62■□□□□ 0.57
ZNF541-201ENST00000263351 DRC1Q96MC2 740 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 PSMB7Q99436 277 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 NAA15Q9BXJ9 866 aaKnown RBP18.62■□□□□ 0.57
ZNF541-201ENST00000263351 RABEP2Q9H5N1 569 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 CCDC87Q9NVE4 849 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 RWDD2AQ9UIY3 292 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 ANAPC4Q9UJX5 808 aa18.62■□□□□ 0.57
ZNF541-201ENST00000263351 RASSF10A6NK89 507 aa18.61■□□□□ 0.57
ZNF541-201ENST00000263351 ATP8B1O43520 1251 aa18.61■□□□□ 0.57
ZNF541-201ENST00000263351 CYP26C1Q6V0L0 522 aa18.61■□□□□ 0.57
ZNF541-201ENST00000263351 DCP1AQ9NPI6 582 aaPredicted RBP18.61■□□□□ 0.57
ZNF541-201ENST00000263351 FEZ2Q9UHY8 353 aaPredicted RBP18.61■□□□□ 0.57
ZNF541-201ENST00000263351 PDE2AO00408 941 aaPredicted RBP18.61■□□□□ 0.57
ZNF541-201ENST00000263351 EXOC5O00471 708 aa18.61■□□□□ 0.57
ZNF541-201ENST00000263351 KCNQ2O43526 872 aa18.61■□□□□ 0.57
ZNF541-201ENST00000263351 GTPBP6O43824 516 aaPredicted RBP18.61■□□□□ 0.57
ZNF541-201ENST00000263351 ZNF658Q5TYW1 1059 aaPredicted RBP18.61■□□□□ 0.57
ZNF541-201ENST00000263351 TMTC1Q8IUR5 882 aa18.61■□□□□ 0.57
ZNF541-201ENST00000263351 TXLNBQ8N3L3 684 aa18.61■□□□□ 0.57
ZNF541-201ENST00000263351 TRIM34Q9BYJ4 488 aa18.61■□□□□ 0.57
ZNF541-201ENST00000263351 BRMS1Q9HCU9 246 aa18.61■□□□□ 0.57
ZNF541-201ENST00000263351 TTF2Q9UNY4 1162 aaKnown RBP18.61■□□□□ 0.57
ZNF541-201ENST00000263351 MACROD2A1Z1Q3 448 aa18.6■□□□□ 0.57
ZNF541-201ENST00000263351 TSPY2A6NKD2 308 aa18.6■□□□□ 0.57
ZNF541-201ENST00000263351 UIMC1Q96RL1 719 aa18.6■□□□□ 0.57
ZNF541-201ENST00000263351 GNL3LQ9NVN8 582 aaKnown RBP18.6■□□□□ 0.57
ZNF541-201ENST00000263351 EHD2Q9NZN4 543 aa18.6■□□□□ 0.57
ZNF541-201ENST00000263351 FCER1AP12319 257 aa18.6■□□□□ 0.57
ZNF541-201ENST00000263351 FAM193AP78312 1265 aa18.6■□□□□ 0.57
ZNF541-201ENST00000263351 ATP2B2Q01814 1243 aa18.6■□□□□ 0.57
ZNF541-201ENST00000263351 EZH2Q15910 746 aaKnown RBP18.6■□□□□ 0.57
ZNF541-201ENST00000263351 HDXQ7Z353 690 aa18.6■□□□□ 0.57
ZNF541-201ENST00000263351 NSUN4Q96CB9 384 aaKnown RBP18.6■□□□□ 0.57
ZNF541-201ENST00000263351 GPR101Q96P66 508 aaPredicted RBP18.6■□□□□ 0.57
ZNF541-201ENST00000263351 IL17RBQ9NRM6 502 aa18.6■□□□□ 0.57
ZNF541-201ENST00000263351 MINPP1Q9UNW1 487 aa18.6■□□□□ 0.57
ZNF541-201ENST00000263351 ABCA3Q99758 1704 aa18.6■□□□□ 0.57
ZNF541-201ENST00000263351 DISP2A7MBM2 1401 aa18.59■□□□□ 0.57
ZNF541-201ENST00000263351 LRRC10BA6NIK2 292 aa18.59■□□□□ 0.57
ZNF541-201ENST00000263351 FECHP22830 423 aa18.59■□□□□ 0.57
ZNF541-201ENST00000263351 TNNT3P45378 269 aaPredicted RBP18.59■□□□□ 0.57
ZNF541-201ENST00000263351 CCDC122Q5T0U0 273 aa18.59■□□□□ 0.57
ZNF541-201ENST00000263351 MB21D1Q8N884 522 aa18.59■□□□□ 0.57
ZNF541-201ENST00000263351 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.59■□□□□ 0.57
ZNF541-201ENST00000263351 ZNF804BA4D1E1 1349 aa18.59■□□□□ 0.57
ZNF541-201ENST00000263351 GRIK5Q16478 980 aa18.59■□□□□ 0.57
ZNF541-201ENST00000263351 TRIM47Q96LD4 638 aa18.59■□□□□ 0.57
ZNF541-201ENST00000263351 ITIH6Q6UXX5 1313 aa18.59■□□□□ 0.57
ZNF541-201ENST00000263351 KLRC4O43908 158 aa18.58■□□□□ 0.57
ZNF541-201ENST00000263351 USP5P45974 858 aa18.58■□□□□ 0.57
ZNF541-201ENST00000263351 PFKFB3Q16875 520 aaPredicted RBP18.58■□□□□ 0.57
ZNF541-201ENST00000263351 POLD4Q9HCU8 107 aa18.58■□□□□ 0.57
ZNF541-201ENST00000263351 LOC102724428A0A0B4J2F2 783 aa18.58■□□□□ 0.56
ZNF541-201ENST00000263351 CYTH3O43739 400 aa18.58■□□□□ 0.56
ZNF541-201ENST00000263351 SIK1P57059 783 aa18.58■□□□□ 0.56
ZNF541-201ENST00000263351 C2orf54Q08AI8 447 aa18.58■□□□□ 0.56
ZNF541-201ENST00000263351 ADSSL1Q8N142 457 aa18.58■□□□□ 0.56
ZNF541-201ENST00000263351 DISC1Q9NRI5 854 aa18.58■□□□□ 0.56
ZNF541-201ENST00000263351 MCM9Q9NXL9 1143 aa18.58■□□□□ 0.56
ZNF541-201ENST00000263351 EPHB6O15197 1021 aa18.57■□□□□ 0.56
ZNF541-201ENST00000263351 HEATR3Q7Z4Q2 680 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms