RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 GALNT17Q6IS24 598 aa26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 PGBD1Q96JS3 809 aa26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 NUP88Q99567 741 aaPredicted RBP26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 VCPKMTQ9H867 229 aa26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 PCDHA4Q9UN74 947 aa26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 SCN4AP35499 1836 aa26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 PNMA6FA0A0J9YX94 578 aa26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 INPP5BP32019 993 aa26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 TOB1P50616 345 aaPredicted RBP26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 RILPL1Q5EBL4 403 aa26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 CCDC12Q8WUD4 166 aaPredicted RBP26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 DCPSQ96C86 337 aaKnown RBP26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 GLIS2Q9BZE0 524 aaPredicted RBP26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 USP17L10C9JJH3 530 aa26.3■■□□□ 1.8
SMARCB1-201ENST00000263121 EPHX2P34913 555 aa26.3■■□□□ 1.8
SMARCB1-201ENST00000263121 SUPT20HL1Q3ZLR7 823 aa26.3■■□□□ 1.8
SMARCB1-201ENST00000263121 BTNL9Q6UXG8 535 aa26.3■■□□□ 1.8
SMARCB1-201ENST00000263121 CCDC84Q86UT8 332 aaPredicted RBP26.3■■□□□ 1.8
SMARCB1-201ENST00000263121 BLIDQ8IZY5 108 aa26.3■■□□□ 1.8
SMARCB1-201ENST00000263121 ZMYND12Q9H0C1 365 aa26.3■■□□□ 1.8
SMARCB1-201ENST00000263121 ISY1Q9ULR0 285 aaKnown RBP26.3■■□□□ 1.8
SMARCB1-201ENST00000263121 ZBTB5O15062 677 aa26.29■■□□□ 1.8
SMARCB1-201ENST00000263121 ADAMTS3O15072 1205 aa26.29■■□□□ 1.8
SMARCB1-201ENST00000263121 NAPAP54920 295 aa26.29■■□□□ 1.8
SMARCB1-201ENST00000263121 EARS2Q5JPH6 523 aaKnown RBP26.29■■□□□ 1.8
SMARCB1-201ENST00000263121 GZF1Q9H116 711 aaPredicted RBP26.29■■□□□ 1.8
SMARCB1-201ENST00000263121 ESYT2A0FGR8 921 aa26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 M0R2N6 131 aa26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 STK38Q15208 465 aa26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 SF3A1Q15459 793 aaKnown RBP26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 CAVIN1Q6NZI2 390 aaKnown RBP26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 SCYL3Q8IZE3 742 aa26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 SPICE1Q8N0Z3 855 aa26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 KCNG4Q8TDN1 519 aa26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 WDR90Q96KV7 1748 aa26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 FAM205CA6NFA0 338 aa26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 SOCS7O14512 581 aa26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 PPP1R11O60927 126 aaPredicted RBP26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 SLC39A14Q15043 492 aa26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 PTPAQ15257 358 aa26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 SULF1Q8IWU6 871 aa26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 ZC3H15Q8WU90 426 aaKnown RBP26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 WRNIP1Q96S55 665 aa26.28■■□□□ 1.8
SMARCB1-201ENST00000263121 TMEM232C9JQI7 657 aa26.27■■□□□ 1.8
SMARCB1-201ENST00000263121 PPP1R18Q6NYC8 613 aa26.27■■□□□ 1.8
SMARCB1-201ENST00000263121 KLRG1Q96E93 195 aa26.27■■□□□ 1.8
SMARCB1-201ENST00000263121 ADM5C9JUS6 153 aa26.26■■□□□ 1.79
SMARCB1-201ENST00000263121 SPTLC2O15270 562 aa26.26■■□□□ 1.79
SMARCB1-201ENST00000263121 NOM1Q5C9Z4 860 aaKnown RBP26.26■■□□□ 1.79
SMARCB1-201ENST00000263121 SYDE2Q5VT97 1194 aa26.26■■□□□ 1.79
SMARCB1-201ENST00000263121 KIAA1683Q9H0B3 1180 aa26.26■■□□□ 1.79
SMARCB1-201ENST00000263121 TMEM63CQ9P1W3 806 aa26.26■■□□□ 1.79
SMARCB1-201ENST00000263121 GOLGA6L4A6NEF3 574 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 FAM83BQ5T0W9 1011 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 C6orf50Q9HD87 102 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 FZD1Q9UP38 647 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 IQCA1LA6NCM1 817 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 SMCO2A6NFE2 343 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 GNA11P29992 359 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 ME1P48163 572 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 ZYXQ15942 572 aaKnown RBP26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 CDC37Q16543 378 aaPredicted RBP26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 QRICH1Q2TAL8 776 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 TPRNQ4KMQ1 711 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 ZKSCAN4Q969J2 545 aaPredicted RBP26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 COA7Q96BR5 231 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 FEZ1Q99689 392 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 TAF1DQ9H5J8 278 aaPredicted RBP26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 PCDHA7Q9UN72 937 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 PCDHA6Q9UN73 950 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 PCDHA8Q9Y5H6 950 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 PAPPA2Q9BXP8 1791 aa26.25■■□□□ 1.79
SMARCB1-201ENST00000263121 POTECB2RU33 542 aa26.24■■□□□ 1.79
SMARCB1-201ENST00000263121 PLA2G6O60733 806 aa26.24■■□□□ 1.79
SMARCB1-201ENST00000263121 STAT2P52630 851 aa26.24■■□□□ 1.79
SMARCB1-201ENST00000263121 NOL9Q5SY16 702 aaKnown RBP26.24■■□□□ 1.79
SMARCB1-201ENST00000263121 KRT26Q7Z3Y9 468 aa26.24■■□□□ 1.79
SMARCB1-201ENST00000263121 WDR18Q9BV38 432 aa26.24■■□□□ 1.79
SMARCB1-201ENST00000263121 NOL7Q9UMY1 257 aaKnown RBP26.24■■□□□ 1.79
SMARCB1-201ENST00000263121 PPP6R2O75170 966 aa26.23■■□□□ 1.79
SMARCB1-201ENST00000263121 DLK2Q6UY11 383 aa26.23■■□□□ 1.79
SMARCB1-201ENST00000263121 PIK3AP1Q6ZUJ8 805 aa26.23■■□□□ 1.79
SMARCB1-201ENST00000263121 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.23■■□□□ 1.79
SMARCB1-201ENST00000263121 PCDHB6Q9Y5E3 794 aa26.23■■□□□ 1.79
SMARCB1-201ENST00000263121 USP2O75604 605 aaPredicted RBP26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 PTPRAP18433 802 aa26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 TRAPPC10P48553 1259 aa26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 IKQ13123 557 aaPredicted RBP26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 RASGRP4Q8TDF6 673 aa26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 LPAR1Q92633 364 aa26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 PICK1Q9NRD5 415 aa26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 PRR12Q9ULL5 1215 aa26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 PHIPQ8WWQ0 1821 aa26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 LIG1P18858 919 aa26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 GSE1Q14687 1217 aa26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 ADALQ6DHV7 355 aa26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 BICD2Q8TD16 824 aa26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 SYAP1Q96A49 352 aaPredicted RBP26.22■■□□□ 1.79
SMARCB1-201ENST00000263121 MORC2Q9Y6X9 1032 aaPredicted RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms