RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 TXNRD2Q9NNW7 524 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 EMILIN3Q9NT22 766 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 IVNS1ABPQ9Y6Y0 642 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 RRP9O43818 475 aaKnown RBP11.17□□□□□ -0.62
TTC39A-201ENST00000262675 GDF11O95390 407 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 CAVIN2O95810 425 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 ZAP70P43403 619 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 TOB2Q14106 344 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-201ENST00000262675 ATL3Q6DD88 541 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 RNF214Q8ND24 703 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 GTF3C6Q969F1 213 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 EDC3Q96F86 508 aaKnown RBP11.17□□□□□ -0.62
TTC39A-201ENST00000262675 FUCA2Q9BTY2 467 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 UBE2OQ9C0C9 1292 aaKnown RBP11.17□□□□□ -0.62
TTC39A-201ENST00000262675 BRCA2P51587 3418 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 FRMPD3Q5JV73 1810 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 GH2P01242 217 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 HOXC6P09630 235 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 MAGEA10P43363 369 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-201ENST00000262675 TRIM32Q13049 653 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 FOXD4L6Q3SYB3 417 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-201ENST00000262675 CERKLQ49MI3 558 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-201ENST00000262675 FOXD4L3Q6VB84 417 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-201ENST00000262675 CATSPERGQ6ZRH7 1159 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 ZNF589Q86UQ0 364 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-201ENST00000262675 PAGR1Q9BTK6 254 aa11.17□□□□□ -0.62
TTC39A-201ENST00000262675 DDX19AQ9NUU7 478 aaKnown RBP11.17□□□□□ -0.62
TTC39A-201ENST00000262675 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.17□□□□□ -0.62
TTC39A-201ENST00000262675 ZMYND8Q9ULU4 1186 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-201ENST00000262675 MYO5AQ9Y4I1 1855 aaKnown RBP11.17□□□□□ -0.62
TTC39A-201ENST00000262675 ZNF236Q9UL36 1845 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 IDH1O75874 414 aaKnown RBP11.16□□□□□ -0.62
TTC39A-201ENST00000262675 HMGN5P82970 282 aaKnown RBP11.16□□□□□ -0.62
TTC39A-201ENST00000262675 ABCB5Q2M3G0 1257 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 ADGRA1Q86SQ6 560 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 PIH1D3Q9NQM4 214 aaKnown RBP11.16□□□□□ -0.62
TTC39A-201ENST00000262675 SLC5A4Q9NY91 659 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 USP25Q9UHP3 1055 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 SAP30BPQ9UHR5 308 aaKnown RBP11.16□□□□□ -0.62
TTC39A-201ENST00000262675 CFAP45Q9UL16 551 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 STXBP5LQ9Y2K9 1186 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 GOLGA6L4A6NEF3 574 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 SOX1O00570 391 aaPredicted RBP11.16□□□□□ -0.62
TTC39A-201ENST00000262675 STRNO43815 780 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 KDM4AO75164 1064 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 PTPREP23469 700 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 LHX8Q68G74 356 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 FBXL16Q8N461 479 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 NECAB1Q8N987 351 aa11.16□□□□□ -0.62
TTC39A-201ENST00000262675 LARP6Q9BRS8 491 aaKnown RBP11.16□□□□□ -0.62
TTC39A-201ENST00000262675 PFASO15067 1338 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 GOLGA6L6A8MZA4 724 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 DLL1O00548 723 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 JAG1P78504 1218 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 ATP2B2Q01814 1243 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 Q3C1V9 767 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 FAM109BQ6ICB4 259 aaPredicted RBP11.15□□□□□ -0.62
TTC39A-201ENST00000262675 DHX32Q7L7V1 743 aaKnown RBP11.15□□□□□ -0.62
TTC39A-201ENST00000262675 MAGEB6Q8N7X4 407 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 MB21D1Q8N884 522 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 RGS22Q8NE09 1264 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 LRCH3Q96II8 777 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 LBHD1Q9BQE6 289 aaPredicted RBP11.15□□□□□ -0.62
TTC39A-201ENST00000262675 AGXT2Q9BYV1 514 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 PORCNQ9H237 461 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 PAG1Q9NWQ8 432 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 HOXC10Q9NYD6 342 aa11.15□□□□□ -0.62
TTC39A-201ENST00000262675 NAV1Q8NEY1 1877 aa11.15□□□□□ -0.63
TTC39A-201ENST00000262675 ZFYP08048 801 aaPredicted RBP11.14□□□□□ -0.63
TTC39A-201ENST00000262675 DYNLL1P63167 89 aaKnown RBP11.14□□□□□ -0.63
TTC39A-201ENST00000262675 GRB14Q14449 540 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 ZMYM1Q5SVZ6 1142 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 DEFB123Q8N688 67 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 SHCBP1Q8NEM2 672 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 LPAR1Q92633 364 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 SPATA32Q96LK8 384 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 DNAJC2Q99543 621 aaKnown RBP11.14□□□□□ -0.63
TTC39A-201ENST00000262675 CRNKL1Q9BZJ0 848 aaKnown RBP11.14□□□□□ -0.63
TTC39A-201ENST00000262675 NUP62CLQ9H1M0 184 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 SH2D4AQ9H788 454 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 PRKAG2Q9UGJ0 569 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 DDX20Q9UHI6 824 aaKnown RBP11.14□□□□□ -0.63
TTC39A-201ENST00000262675 DNM1LO00429 736 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 PFKFB2O60825 505 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 POLR3DP05423 398 aaPredicted RBP11.14□□□□□ -0.63
TTC39A-201ENST00000262675 CYP21A2P08686 494 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 VCAM1P19320 739 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 OLFML2BQ68BL8 750 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 ARRDC4Q8NCT1 418 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 SMARCC2Q8TAQ2 1214 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 SWAP70Q9UH65 585 aa11.14□□□□□ -0.63
TTC39A-201ENST00000262675 MAGEB6P1A0A0J9YX57 407 aa11.13□□□□□ -0.63
TTC39A-201ENST00000262675 CNMDO75829 334 aa11.13□□□□□ -0.63
TTC39A-201ENST00000262675 ADCY5O95622 1261 aa11.13□□□□□ -0.63
TTC39A-201ENST00000262675 SYN1P17600 705 aa11.13□□□□□ -0.63
TTC39A-201ENST00000262675 CCND3P30281 292 aaPredicted RBP11.13□□□□□ -0.63
TTC39A-201ENST00000262675 COG2Q14746 738 aa11.13□□□□□ -0.63
TTC39A-201ENST00000262675 RBM43Q6ZSC3 357 aaKnown RBP11.13□□□□□ -0.63
TTC39A-201ENST00000262675 Q6ZUG5 572 aa11.13□□□□□ -0.63
TTC39A-201ENST00000262675 FAM200AQ8TCP9 573 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms