RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 CHUKO15111 745 aa17.72■□□□□ 0.43
PRPF40B-201ENST00000261897 SNCBQ16143 134 aa17.72■□□□□ 0.43
PRPF40B-201ENST00000261897 NAIF1Q69YI7 327 aaPredicted RBP17.72■□□□□ 0.43
PRPF40B-201ENST00000261897 KCNV1Q6PIU1 500 aa17.72■□□□□ 0.43
PRPF40B-201ENST00000261897 NRKQ7Z2Y5 1582 aa17.72■□□□□ 0.43
PRPF40B-201ENST00000261897 ZIM3Q96PE6 472 aa17.72■□□□□ 0.43
PRPF40B-201ENST00000261897 NUTM2BA6NNL0 878 aaPredicted RBP17.72■□□□□ 0.43
PRPF40B-201ENST00000261897 PP2D1A8MPX8 630 aa17.72■□□□□ 0.43
PRPF40B-201ENST00000261897 NUTM2EB1AL46 878 aaPredicted RBP17.72■□□□□ 0.43
PRPF40B-201ENST00000261897 CARSP49589 748 aaKnown RBP17.72■□□□□ 0.43
PRPF40B-201ENST00000261897 TRIML1Q8N9V2 468 aa17.72■□□□□ 0.43
PRPF40B-201ENST00000261897 RAD21O60216 631 aa17.71■□□□□ 0.43
PRPF40B-201ENST00000261897 DEXIO95424 95 aa17.71■□□□□ 0.43
PRPF40B-201ENST00000261897 PRCPP42785 496 aa17.71■□□□□ 0.43
PRPF40B-201ENST00000261897 SARNPP82979 210 aaKnown RBP17.71■□□□□ 0.43
PRPF40B-201ENST00000261897 EHHADHQ08426 723 aa17.71■□□□□ 0.43
PRPF40B-201ENST00000261897 SDR42E1Q8WUS8 393 aa17.71■□□□□ 0.43
PRPF40B-201ENST00000261897 STK38LQ9Y2H1 464 aa17.71■□□□□ 0.43
PRPF40B-201ENST00000261897 KIF20BQ96Q89 1820 aa17.71■□□□□ 0.43
PRPF40B-201ENST00000261897 IFNAR2P48551 515 aa17.71■□□□□ 0.43
PRPF40B-201ENST00000261897 DYDC1Q8WWB3 177 aa17.71■□□□□ 0.43
PRPF40B-201ENST00000261897 ANKRD18BA2A2Z9 1011 aa17.71■□□□□ 0.42
PRPF40B-201ENST00000261897 ACTN4O43707 911 aaKnown RBP17.71■□□□□ 0.42
PRPF40B-201ENST00000261897 GCP02774 474 aa17.71■□□□□ 0.42
PRPF40B-201ENST00000261897 LSP1P33241 339 aa17.71■□□□□ 0.42
PRPF40B-201ENST00000261897 NAA35Q5VZE5 725 aa17.71■□□□□ 0.42
PRPF40B-201ENST00000261897 ATG9AQ7Z3C6 839 aa17.71■□□□□ 0.42
PRPF40B-201ENST00000261897 SPATA4Q8NEY3 305 aa17.71■□□□□ 0.42
PRPF40B-201ENST00000261897 HPS3Q969F9 1004 aa17.71■□□□□ 0.42
PRPF40B-201ENST00000261897 SRPRBQ9Y5M8 271 aaKnown RBP17.71■□□□□ 0.42
PRPF40B-201ENST00000261897 RFX5P48382 616 aaPredicted RBP17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 CCT8L2Q96SF2 557 aa17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 TUBGCP2Q9BSJ2 902 aa17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 TEX11Q8IYF3 940 aa17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 ZNF654Q8IZM8 581 aa17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 RCCD1A6NED2 376 aa17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 RPN1P04843 607 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 VIMP08670 466 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 MYO1EQ12965 1108 aa17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 KRT71Q3SY84 523 aa17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 FAM133BQ5BKY9 247 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 TRAPPC11Q7Z392 1133 aa17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 SUGP1Q8IWZ8 645 aaKnown RBP17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 AMOTL1Q8IY63 956 aa17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 TMEM87BQ96K49 555 aa17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 DPH5Q9H2P9 285 aa17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 KANSL2Q9H9L4 492 aa17.7■□□□□ 0.42
PRPF40B-201ENST00000261897 ENO4A6NNW6 628 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 PRPF6O94906 941 aaKnown RBP17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 CTNNA1P35221 906 aaKnown RBP17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 PDE4DQ08499 809 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 WDR93Q6P2C0 686 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 IFT20Q8IY31 132 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 ZNF473Q8WTR7 871 aaKnown RBP17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 SEPT11Q9NVA2 429 aaKnown RBP17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 STIM2Q9P246 746 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 MYO1AQ9UBC5 1043 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 JAG2Q9Y219 1238 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 CYP2D7A0A087X1C5 515 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 PHKA1P46020 1223 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 EPHB4P54760 987 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 MAP3K12Q12852 859 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 IFIT1BQ5T764 474 aaKnown RBP17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 CATIPQ7Z7H3 387 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 CNPY4Q8N129 248 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 FANCBQ8NB91 859 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 GSDMAQ96QA5 445 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 CAPN6Q9Y6Q1 641 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 CDC42BPGQ6DT37 1551 aa17.69■□□□□ 0.42
PRPF40B-201ENST00000261897 TRIM68Q6AZZ1 485 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 DYMQ7RTS9 669 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 CCDC13Q8IYE1 715 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 VAT1LQ9HCJ6 419 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 EXOC1Q9NV70 894 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 DONSONQ9NYP3 566 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 CCDC194A0A1B0GVG4 234 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 GCOM1H8Y6P7 765 aaPredicted RBP17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 MYZAPP0CAP1 466 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 SPTY2D1Q68D10 685 aaPredicted RBP17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 TBC1D1Q86TI0 1168 aaPredicted RBP17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 NLRP14Q86W24 1093 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 MGARPQ8TDB4 240 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 GOLPH3Q9H4A6 298 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 RBM12Q9NTZ6 932 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 PIK3C2BO00750 1634 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 AGPSO00116 658 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 CEP104O60308 925 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 PDE6AP16499 860 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 EIF4A3P38919 411 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 HERVK_113P62684 666 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 PDIA6Q15084 440 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 MB21D1Q8N884 522 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 RSRC1Q96IZ7 334 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 AGXT2Q9BYV1 514 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 CD2APQ9Y5K6 639 aa17.68■□□□□ 0.42
PRPF40B-201ENST00000261897 FAM153BP0C7A2 387 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 TRIM14Q14142 442 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 FAM153CQ494X1 144 aa17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 EARS2Q5JPH6 523 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-201ENST00000261897 DDX42Q86XP3 938 aaKnown RBP eCLIP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms