RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 CFAP43Q8NDM7 1665 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 PSDA5PKW4 1024 aaPredicted RBP13.44□□□□□ -0.26
SPG11-201ENST00000261866 KRT81Q14533 505 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 ZBTB8OSQ8IWT0 167 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 TTC30BQ8N4P2 665 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 CCDC26Q8TAB7 109 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 SECISBP2LQ93073 1101 aaKnown RBP13.44□□□□□ -0.26
SPG11-201ENST00000261866 UTP11Q9Y3A2 253 aaKnown RBP13.44□□□□□ -0.26
SPG11-201ENST00000261866 SAT1P21673 171 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 KAZNQ674X7 775 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 UGGT1Q9NYU2 1555 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 VPS41P49754 854 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 SLC9C1Q4G0N8 1177 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 ZBTB33Q86T24 672 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 CCDC125Q86Z20 511 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 CERS3Q8IU89 383 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 COA7Q96BR5 231 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 SLC4A1P02730 911 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 BCRP11274 1271 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 CAPN2P17655 700 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 C8orf74Q6P047 294 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 KIAA1524Q8TCG1 905 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 CLIC4Q9Y696 253 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 SAMD9Q5K651 1589 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 BTBD18B2RXH4 712 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 VWA3BQ502W6 1294 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 CCDC105Q8IYK2 499 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 PIGBQ92521 554 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 TBC1D8O95759 1140 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 MMP10P09238 476 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 U2AF2P26368 475 aaKnown RBP eCLIP13.43□□□□□ -0.267e-7■■■□□ 19.1
SPG11-201ENST00000261866 MGARPQ8TDB4 240 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 PTPRTO14522 1441 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 PDE8BO95263 885 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 CCDC110Q8TBZ0 833 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 GJA10Q969M2 543 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 TBC1D31Q96DN5 1066 aa13.43□□□□□ -0.26
SPG11-201ENST00000261866 NAPGQ99747 312 aaPredicted RBP13.43□□□□□ -0.26
SPG11-201ENST00000261866 EVCP57679 992 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 SLFNL1Q499Z3 407 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 FMNL3Q8IVF7 1028 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 HACE1Q8IYU2 909 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 PCIF1Q9H4Z3 704 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 PEG3Q9GZU2 1588 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 NR1I2O75469 434 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 PFKFB1P16118 471 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 OSBPP22059 807 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 LCORLQ8N3X6 602 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 CCDC89Q8N998 374 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 GSDMBQ8TAX9 411 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 DISC1Q9NRI5 854 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 TNNC2P02585 160 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 OATP04181 439 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 HOXA13P31271 388 aaPredicted RBP13.42□□□□□ -0.26
SPG11-201ENST00000261866 CUL4BQ13620 913 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 UBE2SQ16763 222 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 SHANK2Q9UPX8 1470 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 SCG2P13521 617 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 PIK3CAP42336 1068 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 DMP1Q13316 513 aaPredicted RBP13.42□□□□□ -0.26
SPG11-201ENST00000261866 KIAA1024Q9UPX6 916 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 ARAP3Q8WWN8 1544 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 ANKS4BQ8N8V4 417 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 KIF9Q9HAQ2 790 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 PABPC4Q13310 644 aaKnown RBP eCLIP13.42□□□□□ -0.26
SPG11-201ENST00000261866 NEK8Q86SG6 692 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 UNC5CLQ8IV45 518 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 MICALL1Q8N3F8 863 aa13.42□□□□□ -0.26
SPG11-201ENST00000261866 GPR161Q8N6U8 529 aaKnown RBP13.42□□□□□ -0.26
SPG11-201ENST00000261866 FAM196BA6NMK8 535 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 MAGEA1P43355 309 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 LRRC41Q15345 812 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 KRT222Q8N1A0 295 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 PPM1KQ8N3J5 372 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 SPATA17Q96L03 361 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 ZNF577Q9BSK1 485 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 ZKSCAN5Q9Y2L8 839 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 USP17L3A6NCW0 530 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 USP17L4A6NCW7 530 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 GNL1P36915 607 aaPredicted RBP13.41□□□□□ -0.26
SPG11-201ENST00000261866 LLGL1Q15334 1064 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 ARMCX5Q6P1M9 558 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 USP17L1Q7RTZ2 530 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 PIGSQ96S52 555 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 ATF7P17544 494 aaPredicted RBP13.41□□□□□ -0.26
SPG11-201ENST00000261866 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 NME8Q8N427 588 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 POMGNT1Q8WZA1 660 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 PRIMPOLQ96LW4 560 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 ZMYM6O95789 1325 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 SNAP23O00161 211 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 IFNB1P01574 187 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 ZNF589Q86UQ0 364 aaPredicted RBP13.41□□□□□ -0.26
SPG11-201ENST00000261866 MCF2L2Q86YR7 1114 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 FAM178BQ8IXR5 827 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 CD2APQ9Y5K6 639 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 ZMYM4Q5VZL5 1548 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 P4HA1P13674 534 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 CLUL1Q15846 466 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 CCDC121Q6ZUS5 278 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms