RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 SFMBT2Q5VUG0 894 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 RBM43Q6ZSC3 357 aaKnown RBP17.96■□□□□ 0.47
SREBF1-201ENST00000261646 HOOK3Q86VS8 718 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 CCDC170Q8IYT3 715 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 LRWD1Q9UFC0 647 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 KIF28PB7ZC32 967 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 MMP1P03956 469 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 ASIC2Q16515 512 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 TCP11Q8WWU5 503 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 PRR29P0C7W0 189 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 GNA11P29992 359 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 PRPHP41219 470 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 ZBTB16Q05516 673 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 PEX26Q7Z412 305 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 SYCP3Q8IZU3 236 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 BTG4Q9NY30 223 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.96■□□□□ 0.477e-7■■■□□ 17.9
SREBF1-201ENST00000261646 NRXN1Q9ULB1 1477 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 SLC8A1P32418 973 aa17.95■□□□□ 0.46
SREBF1-201ENST00000261646 INTS8Q75QN2 995 aaKnown RBP17.95■□□□□ 0.46
SREBF1-201ENST00000261646 CABP7Q86V35 215 aa17.95■□□□□ 0.46
SREBF1-201ENST00000261646 REXO1L1PQ8IX06 675 aa17.95■□□□□ 0.46
SREBF1-201ENST00000261646 DPH5Q9H2P9 285 aa17.95■□□□□ 0.46
SREBF1-201ENST00000261646 SRPRBQ9Y5M8 271 aaKnown RBP17.95■□□□□ 0.46
SREBF1-201ENST00000261646 TNKSO95271 1327 aa17.95■□□□□ 0.46
SREBF1-201ENST00000261646 LMTK2Q8IWU2 1503 aa17.95■□□□□ 0.46
SREBF1-201ENST00000261646 SNAP23O00161 211 aa17.95■□□□□ 0.46
SREBF1-201ENST00000261646 ACTN4O43707 911 aaKnown RBP17.95■□□□□ 0.46
SREBF1-201ENST00000261646 CCNT1O60563 726 aaKnown RBP17.95■□□□□ 0.46
SREBF1-201ENST00000261646 PTPREP23469 700 aa17.95■□□□□ 0.46
SREBF1-201ENST00000261646 SF3B2Q13435 895 aaKnown RBP17.95■□□□□ 0.46
SREBF1-201ENST00000261646 MTMR3Q13615 1198 aa17.95■□□□□ 0.46
SREBF1-201ENST00000261646 PLVAPQ9BX97 442 aa17.95■□□□□ 0.46
SREBF1-201ENST00000261646 APBA1Q02410 837 aa17.95■□□□□ 0.46
SREBF1-201ENST00000261646 PUM3Q15397 648 aaKnown RBP17.95■□□□□ 0.46
SREBF1-201ENST00000261646 ABHD10Q9NUJ1 306 aa17.95■□□□□ 0.46
SREBF1-201ENST00000261646 TBC1D7Q9P0N9 293 aa17.95■□□□□ 0.46
SREBF1-201ENST00000261646 NR1D1P20393 614 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 METTL16Q86W50 562 aaKnown RBP17.94■□□□□ 0.46
SREBF1-201ENST00000261646 UHMK1Q8TAS1 419 aaKnown RBP17.94■□□□□ 0.46
SREBF1-201ENST00000261646 COG1Q8WTW3 980 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 PAGE5Q96GU1 130 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 FBXW10Q5XX13 1052 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 VSIG1Q86XK7 387 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 TC2NQ8N9U0 490 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 SPATA5Q8NB90 893 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 MGARPQ8TDB4 240 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 PSD3Q9NYI0 1048 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 ERBB3P21860 1342 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 BAG3O95817 575 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 IFNAR1P17181 557 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 NELFCDQ8IXH7 590 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 SYNE4Q8N205 404 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 ZNF446Q9NWS9 450 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 PCDH11XQ9BZA7 1347 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 PCDH11YQ9BZA8 1340 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 SH2B2O14492 632 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-201ENST00000261646 MOCS3O95396 460 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 FMNL1O95466 1100 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-201ENST00000261646 NKIRAS1Q9NYS0 192 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 ZNF652Q9Y2D9 606 aa17.94■□□□□ 0.46
SREBF1-201ENST00000261646 CHUKO15111 745 aa17.93■□□□□ 0.46
SREBF1-201ENST00000261646 USP14P54578 494 aa17.93■□□□□ 0.46
SREBF1-201ENST00000261646 CNOT6LQ96LI5 555 aaKnown RBP17.93■□□□□ 0.46
SREBF1-201ENST00000261646 TRIM7Q9C029 511 aa17.93■□□□□ 0.46
SREBF1-201ENST00000261646 ASAP1Q9ULH1 1129 aa17.93■□□□□ 0.46
SREBF1-201ENST00000261646 CEP83Q9Y592 693 aa17.93■□□□□ 0.46
SREBF1-201ENST00000261646 MEX3CQ5U5Q3 659 aaKnown RBP17.93■□□□□ 0.46
SREBF1-201ENST00000261646 FNBP4Q8N3X1 1017 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-201ENST00000261646 NHEJ1Q9H9Q4 299 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-201ENST00000261646 ZSWIM5Q9P217 1185 aa17.93■□□□□ 0.46
SREBF1-201ENST00000261646 SALL3Q9BXA9 1300 aa17.93■□□□□ 0.46
SREBF1-201ENST00000261646 KRIT1O00522 736 aa17.93■□□□□ 0.46
SREBF1-201ENST00000261646 VWA3BQ502W6 1294 aa17.93■□□□□ 0.46
SREBF1-201ENST00000261646 POLD4Q9HCU8 107 aa17.93■□□□□ 0.46
SREBF1-201ENST00000261646 SLC39A2Q9NP94 309 aa17.93■□□□□ 0.46
SREBF1-201ENST00000261646 RGS16O15492 202 aaPredicted RBP17.92■□□□□ 0.46
SREBF1-201ENST00000261646 ACTN3Q08043 901 aaPredicted RBP17.92■□□□□ 0.46
SREBF1-201ENST00000261646 TCIRG1Q13488 830 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 HIBCHQ6NVY1 386 aaPredicted RBP17.92■□□□□ 0.46
SREBF1-201ENST00000261646 SDR42E1Q8WUS8 393 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 NFU1Q9UMS0 254 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 MED23Q9ULK4 1368 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 MROH2AA6NES4 1674 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 EEF1GP26641 437 aaKnown RBP17.92■□□□□ 0.46
SREBF1-201ENST00000261646 FMR1Q06787 632 aaKnown RBP eCLIP17.92■□□□□ 0.46
SREBF1-201ENST00000261646 PPARAQ07869 468 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 RAD9BQ6WBX8 426 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 LMNTD2Q8IXW0 634 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 CCDC63Q8NA47 563 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 LPIN2Q92539 896 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 CD163L1Q9NR16 1453 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 CYP27B1O15528 508 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 C6orf163Q5TEZ5 329 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 ALS2CLQ60I27 953 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 NOA1Q8NC60 698 aaKnown RBP17.92■□□□□ 0.46
SREBF1-201ENST00000261646 RRP36Q96EU6 259 aaKnown RBP17.92■□□□□ 0.46
SREBF1-201ENST00000261646 UIMC1Q96RL1 719 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 GREM2Q9H772 168 aa17.92■□□□□ 0.46
SREBF1-201ENST00000261646 CETN3O15182 167 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms